Gene

KWMTBOMO06278

Pre Gene Modal

BGIBMGA001823

Annotation

PREDICTED:_ras-related_protein_Rab-24-like_[Amyelois_transitella]

Location

Bomo_Chr11(+):3725506-3726542      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.819 Nuclear   Reliability : 1.725

CDS

ATGTATAGTTGCAAAGTATATTTATGTGGTACAAAAAAGGATTTATTAGACGGAGGGTTCGTGAAAAGGGAAGTGGCCGAAGAGATAGTGAATACTTACTCGCAAGATTTGAACGGACATTTCCTTACATCGAGCAAAACCGGTGAGAATGTCGATGAACTTTTCCAGAAGATTGTCGACGACCTTGCTGCTGACGTGGAGGTAATGAAGACGGTTACGGAGAGCAGATTGCTGCTGACAGAGCTAGACAAACGCAAAAGCAAAAAGGATGTGTGTGCATGCTAG

Protein

MYSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTELDKRKSKKDVCAC

Uniprot

H9IX40   A0A2W1BR47   A0A2H1VY57   A0A2H1V5D4   A0A2A4JQQ2   A0A1E1WRL3   + More
A0A212F0Y1   A0A194Q4D6   A0A0J7L1P4   E2AP76   A0A151IVE6   A0A026WAD7   E9IHL7   F4X3A1   A0A2J7PQN6   A0A267G8K3   A0A1I8G0V7   A0A2B4RZL6   A0A151WEN9   A0A195BDL3   A0A158NB70   A0A154PKK7   A0A3M6TRE3   A0A3Q3B6U7   A0A1Z5KWR4   A0A195FFZ4   A0A151K214   A0A3P8VSI4   A0A210PPL2   A0A1Z5L092   A0A3R7SKS6   A0A067RHX9   A0A1S3IJZ8   U3K236  

Pubmed

19121390    28756777    22118469    26354079    20798317    24508170    + More
30249741    21282665    21719571    26392545    21347285    30382153    28528879    24487278    28812685    24845553   

EMBL

BABH01021298    KZ150008    PZC75146.1    ODYU01005111    SOQ45656.1    ODYU01000740    + More
SOQ35986.1    NWSH01000758    PCG74385.1    GDQN01001613    JAT89441.1    AGBW02011017    OWR47364.1    KQ459463    KPJ00403.1    LBMM01001218    KMQ96702.1    GL441481    EFN64749.1    KQ980911    KYN11471.1    KK107323    QOIP01000002    EZA52596.1    RLU25573.1    GL763289    EFZ19958.1    GL888609    EGI59082.1    NEVH01022635    PNF18642.1    NIVC01002246    NIVC01000522    NIVC01000488    PAA59608.1    PAA81582.1    PAA82183.1    LSMT01000234    PFX22596.1    KQ983238    KYQ46286.1    KQ976509    KYM82648.1    ADTU01000255    KQ434948    KZC12399.1    RCHS01003088    RMX43950.1    GFJQ02007408    JAV99561.1    KQ981606    KYN39615.1    LKEX01009735    KYN50159.1    NEDP02005567    OWF38440.1    GFJQ02006255    JAW00715.1    QCYY01003154    ROT65026.1    KK852669    KDR18847.1    AGTO01020930   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000036403    UP000000311    + More
UP000078492    UP000053097    UP000279307    UP000007755    UP000235965    UP000215902    UP000095280    UP000225706    UP000075809    UP000078540    UP000005205    UP000076502    UP000275408    UP000264800    UP000078541    UP000078542    UP000265120    UP000242188    UP000283509    UP000027135    UP000085678    UP000016665   

PRIDE

H9IX40   

Pfam

PF00071   Ras

Interpro

IPR001806   Small_GTPase        + More
IPR027417   P-loop_NTPase       
IPR005225   Small_GTP-bd_dom       
IPR041828   Rab24       

SUPFAM

SSF52540   SSF52540       

CDD

cd04118  Rab24

ProteinModelPortal

H9IX40   A0A2W1BR47   A0A2H1VY57   A0A2H1V5D4   A0A2A4JQQ2   A0A1E1WRL3   + More
A0A212F0Y1   A0A194Q4D6   A0A0J7L1P4   E2AP76   A0A151IVE6   A0A026WAD7   E9IHL7   F4X3A1   A0A2J7PQN6   A0A267G8K3   A0A1I8G0V7   A0A2B4RZL6   A0A151WEN9   A0A195BDL3   A0A158NB70   A0A154PKK7   A0A3M6TRE3   A0A3Q3B6U7   A0A1Z5KWR4   A0A195FFZ4   A0A151K214   A0A3P8VSI4   A0A210PPL2   A0A1Z5L092   A0A3R7SKS6   A0A067RHX9   A0A1S3IJZ8   U3K236  

PDB

4G01     E-value=0.00203948,     Score=90

KEGG

101745412    K07912 Ras-related protein Rab-24 | (RefSeq) ras-related protein Rab-24-like

GO

GO:0003924   GO:0005525   GO:0051213   GO:0005776   GO:0007264   GO:0003676   GO:0016787   GO:0008235   GO:0019538   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

Length:

94

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.38056

outside

1  -  94

 

 

Pi

83.836748

Theta

118.040249

Tajima's D

-0.74322

CLR

164.222629

CSRT

0.190490475476226

Interpretation

Uncertain