Gene

KWMTBOMO06273

Pre Gene Modal

BGIBMGA001623

Annotation

PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_11-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr11(-):3643612-3649165      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.279

CDS

ATGTTCCGTACTCATTCGGATCTTGTGCGAACGCCACCTGTGCAAAAGGCGAGCTGCGATTCCGAAGTTTTCAAATGCGATCTGTGTAAAGCGTGCTGGCTATCCGAAACAGAAGCTGACTTGCACAGAAAGATCGCACATTTCCCTGAATTAATTTCAAAATCGAAATGCGAAACGAATCATATGTGCTTGATCTGCATGCGACCTCAAGAAAGTAAGGACAGTCTGTTGAAACACACGAAAACTGATCATCTATTATCCTCACCGACTGCAAGGAAAGTCGAGCGCGAAATATTTGTATGCGACCATTGTAACGGAGTATTCTTCAACAAATTCATGTTGACTGCTCATTTCTATTTCAAACACATTAAAGATCAAACTAGAGGCATACAATGTGTAATATGCAACCGATATATGCATTACAAGAACACATGGTTCCATTTGAATAATGTGCACATGGTGAACACGAAAACGGCATGCCAAATATGTTTAAACCAATTTCAGACGACAGCAAAATTGAACGAGCACTTAAAGTCACATAAGCCGTACCTGAACTGCACTATATGCGGATACACGGCAAGCAGGGACTCATATTTCACAGAACACCTAGAGAAACATAGGAAATCAAATGTTACATCAGTTAAGAATCACAAGCAGTACTTCACTAGAATGAAGAAATATCATAACTACAGTCTCTATAGTGGTATCAAGGGATTATTTTTATACAATGTTCATATATGCTTGCTGTGTCGCGAGATATGTTCTAGCGATGATGAAATGAAATCGCATATATGCACCGAGCATATGCAAACAAATGTGGTGAAAAAGAAACCCGTTTGTGCGTGCGGAAAGGATTTCTTCAATAATGTTCTATTAAAACATCATGTGTTTAAGTTAAAAGGGATGCATCGGGCTTTAAATGACAATGAGGTCCCCGAGGCACAGATTAGTGACAATGAGAATTCCGAGGTAGATATTAGTGATAAAGAGATTCCCGAGACACAGATTAGTGATATTGAGAATACTTATATACAGATTAATGATGACAAAGAAATAAATACAAATATAGAAATGGAAGGAAATCTCACTAAAGAATGTCAAGAATATCTTTCCATTCAAAATTCAGAAGTCATAGATGTGTACGCAGTACAAGAGGAATATGAAATAGAATAG

Protein

MFRTHSDLVRTPPVQKASCDSEVFKCDLCKACWLSETEADLHRKIAHFPELISKSKCETNHMCLICMRPQESKDSLLKHTKTDHLLSSPTARKVEREIFVCDHCNGVFFNKFMLTAHFYFKHIKDQTRGIQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSHKPYLNCTICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSGIKGLFLYNVHICLLCREICSSDDEMKSHICTEHMQTNVVKKKPVCACGKDFFNNVLLKHHVFKLKGMHRALNDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGNLTKECQEYLSIQNSEVIDVYAVQEEYEIE

Uniprot

A0A2A4K6W9   A0A2H1VVA4   A0A2H1VTM4   A0A212EVA8   A0A0N1PHX9   A0A194Q4Y1   + More
A0A0L7KTN1   A0A146S8U7   A0A146QP19   A0A146PM04   A0A336M1L2   A0A2I4AIN2   A0A146SDR0   A0A2I4DD54   A0A2I4DD45   A0A194Q1P7   A0A146QNF7   A0A1J1I4W8   A0A146Q541   A0A146RNE2   A0A146SSS6   A0A0L8HKL4   A0A3Q3A3Y6   A0A2I4AI30   A0A0L8FNG0   B1WB42   A0A146STE8   G3VRD7   A0A3Q2FTC8   A0A1J1IX89   A0A2I4CX17   A0A060XZM4   D6W9U2   A0A2P6KBI2   A0A3B3UKD6   A0A1S3KJD3   A0A146P0L5   F6URM0   A0A044UWW2   A0A0L8IDE1   V4CQJ3   A0A3B4A388  

Pubmed

22118469    26354079    26227816    20431018    21709235    24755649    + More
18362917    19820115    23254933    25463417   

EMBL

NWSH01000080    PCG79819.1    ODYU01004487    SOQ44412.1    ODYU01004212    SOQ43842.1    + More
AGBW02012212    OWR45438.1    KQ459894    KPJ19525.1    KQ459463    KPJ00414.1    JTDY01005989    KOB66389.1    GCES01109268    JAQ77054.1    GCES01128451    JAQ57871.1    GCES01141323    JAQ44999.1    UFQT01000292    SSX22889.1    GCES01107597    JAQ78725.1    KQ459579    KPI99502.1    GCES01129112    JAQ57210.1    CVRI01000041    CRK95383.1    GCES01135131    JAQ51191.1    GCES01116391    JAQ69931.1    GCES01102681    JAQ83641.1    KQ417917    KOF89752.1    KQ428450    KOF66173.1    AAMC01009379    BC161608    AAI61608.1    GCES01102682    JAQ83640.1    AEFK01157338    CVRI01000063    CRL04767.1    FR906005    CDQ82594.1    KQ971312    EEZ98548.1    MWRG01017055    PRD23691.1    GCES01148824    JAQ37498.1    CMVM020000238    KQ415945    KOF99518.1    KB199652    ESP04735.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    UP000192220    + More
UP000183832    UP000053454    UP000264800    UP000008143    UP000007648    UP000265020    UP000193380    UP000007266    UP000261500    UP000087266    UP000024404    UP000030746    UP000261520   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF00651   BTB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR009000   Transl_B-barrel_sf       
IPR027417   P-loop_NTPase       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       

SUPFAM

SSF50447   SSF50447        + More
SSF52540   SSF52540       
SSF57667   SSF57667       
SSF54695   SSF54695       

ProteinModelPortal

A0A2A4K6W9   A0A2H1VVA4   A0A2H1VTM4   A0A212EVA8   A0A0N1PHX9   A0A194Q4Y1   + More
A0A0L7KTN1   A0A146S8U7   A0A146QP19   A0A146PM04   A0A336M1L2   A0A2I4AIN2   A0A146SDR0   A0A2I4DD54   A0A2I4DD45   A0A194Q1P7   A0A146QNF7   A0A1J1I4W8   A0A146Q541   A0A146RNE2   A0A146SSS6   A0A0L8HKL4   A0A3Q3A3Y6   A0A2I4AI30   A0A0L8FNG0   B1WB42   A0A146STE8   G3VRD7   A0A3Q2FTC8   A0A1J1IX89   A0A2I4CX17   A0A060XZM4   D6W9U2   A0A2P6KBI2   A0A3B3UKD6   A0A1S3KJD3   A0A146P0L5   F6URM0   A0A044UWW2   A0A0L8IDE1   V4CQJ3   A0A3B4A388  

PDB

5YJ3     E-value=0.0078523,     Score=92

KEGG

101744882    no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 41-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0046872   GO:0006810   GO:0006378   GO:0016787   GO:0008235   GO:0019538   GO:0030145   GO:0015923   GO:0006260  

Length:

390

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.38958

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02672

outside

1  -  390

 

 

Pi

202.212323

Theta

178.757657

Tajima's D

0.251584

CLR

0.400528

CSRT

0.43852807359632

Interpretation

Uncertain