Pre Gene Modal
BGIBMGA001818
Annotation
PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.007
Sequence
CDS
ATGTTTCCCAAACAGACTTTTGGCAGTAATGCCACTTCAGGTTTTGGTTCCTTCAATTCTGGCGCGACAACTTCGTCCCCTTTTGGCGGATTCAAACCTGCCACAGGATCTTTTGGTGCGAGCACGTCAACGCAGCCCGCCACTGGTGGAGGTCTCTTCGCGAACAATACCTCTGGTGGTGGTCTTTTCGGGAATCCCGGTCCCTCGACATCGACTTCCGCCTTCGGGACGAGCACCACTGGTTTCGGCTTCGGCGGAGGTGCTACGTCCGGTGGACTATTCGGGAATACCTCGACCGCTGGAGGGGGTTTGTTCGGGAACACGCAGGCGACACCCTCGTTTGGAGTCAAACCGACAGGTTTCGGCTTCAGCGGCTCGACCACGACCGGAGCGACCACCGGGAACCTGTTCGGCACGCCGGCGACCGGACCCGGCGCCGGACTGTTCGCGCCCCAGGGCAACACCATGTCCGGCGGGGGACTGTTCGGGGGGAACACCAGCGCTGGTGCTTTCGGTCAGCAGCAACCCACAGGGACCGGCCATGTCAAGTTCAACCCAGTTGTTGGGACGGAGGTGGTGATGAAAAATGGCACATCACAGAACATTAACATCAAACATCACTGCATAACTTTCATGAAGGAATACGAAGGCAAAAGCTTAGAGGAGCTACGTTTGGAAGATTACATGGCAGGGCGAAAGGGTTCAACTGCCACCACGGGGATGTTCGGAGGTTTCCAGCAGACAACAGAGAACAAACCCTTGTTCGGCAGCACTGGTTTCGGCCAGCCAGCTACCACGAGCGCCCCCGGCATGTTCGGGACGGGATCCGGCCTGGGGACGTCCGGGGCATTCGGACAAAACAGTACATTCTCGTTTGGCGGCAACACGAATACGACGACCACGGGCCTCTTCGGTGCAAACAAGCCGCCGGCTTTCGGTACCAGCACTGCGGGCTCCACCCTGTTCAATACAACGACGACACAAGCGCCGGCGTTCGGCGCCAGTACTAACACATTCGGGTTTGGCGCCAACACGCAGAATCAGTCAACTGGTATATTCGGGGCGAAGCCGGCAACCGGAGCGTTCGGCACGACGCCGGCCAGCTCGGGCTTCGGTTCATTCTCGGGGGGCGGAGCACCCTTCGCTGCCAAGACGACGGCTCCGGCGTTCGGTACCACCACATCCGCATTCGGCAGCATGGCGCCTACGTTCGGCAGCGGCACGCAGGGCGGGGGCCTGTTCGGGCAGGGCACGGCCTTCGGGAAGCCGGCCACCACGCAGCCCAGCTTCAGCTTCGCCGCCTCGCAGCCCGCCGCGCCGGGGCTGGGGGCCGGGGCGGGGGGCGTGTTCCAGGGCAAGCCCGCGGCGCCGAGCTTCGGCACGCTCGGGCTCGGCACGTTCCAGCAGCAGCCCGCCAACACGTTCAAGACGGACGGCGTGCTGGGCGGCGGAATGTTCGGGAACAACAACGCGCTGGGCTCCGGCTTCGGTTTGGGCTCGATGAACGCGAACAACAGTCTGCTGGCGAACAACAGCTTATCCGGCGCCTCTGCTGGCGGCAACGTGCACGAGCAGATCCTGACGATGGCGGCCCGCCCGTACGGGGACTCGCCCCTCTTCAAGGACCTGCTGCCCGATTCGACAACGGCAGCCGAAGACATACTGAAGCCGACGAACCCGCTGGCGCTGAAGGCGGTCCTGGACGGCTCCCATTCCGCCTACAGGATCAACTCGCCCACCTCACGGGTGCAACCCAGGCAGCTGCCCGTACATAAGAAGTCGCTCTTCGACGGCCTAGAAGAATCGGATTCGAGCTTAGAAGACAAGCTGTGCTTGAAGCCGAGCCGCAAGCGTCTGGTGCTGCGCGCCCGCCCCGCCGACGGACAAGACGAGGGACGTACCAACAGATCATTCGAGCAACCCTCCAGTGGGCCGGGCCGCACGCAGGACTCCGTCGACCAAGTGGACAGGTCCGCCGACGTTAACCGTAACAAGTCCACGGCCGACACAGAGGAAAATGGCGATTTACATCCAGACAAGCACAGCAGGTGGATCAACTCGCCAAAGATCAGCGATCTGTGGACGGAGCGCGACCACAAGCCCGACGCGCAGCGGACCAACAGGATGTACCCCGACATCGAAAAAGAAGTGTCCGAACATATATCCGAGAGACGCGCCAGCTGGTGA
Protein
MFPKQTFGSNATSGFGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGGGLFGNPGPSTSTSAFGTSTTGFGFGGGATSGGLFGNTSTAGGGLFGNTQATPSFGVKPTGFGFSGSTTTGATTGNLFGTPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTGTGHVKFNPVVGTEVVMKNGTSQNINIKHHCITFMKEYEGKSLEELRLEDYMAGRKGSTATTGMFGGFQQTTENKPLFGSTGFGQPATTSAPGMFGTGSGLGTSGAFGQNSTFSFGGNTNTTTTGLFGANKPPAFGTSTAGSTLFNTTTTQAPAFGASTNTFGFGANTQNQSTGIFGAKPATGAFGTTPASSGFGSFSGGGAPFAAKTTAPAFGTTTSAFGSMAPTFGSGTQGGGLFGQGTAFGKPATTQPSFSFAASQPAAPGLGAGAGGVFQGKPAAPSFGTLGLGTFQQQPANTFKTDGVLGGGMFGNNNALGSGFGLGSMNANNSLLANNSLSGASAGGNVHEQILTMAARPYGDSPLFKDLLPDSTTAAEDILKPTNPLALKAVLDGSHSAYRINSPTSRVQPRQLPVHKKSLFDGLEESDSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSADVNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDHKPDAQRTNRMYPDIEKEVSEHISERRASW
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Interpro
SUPFAM
SSF82215
SSF82215
Gene 3D
ProteinModelPortal
PDB
3MMY
E-value=6.54635e-12,
Score=173
Ontologies
PANTHER
Topology
Length:
728
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13929
Exp number, first 60 AAs:
0.0493
Total prob of N-in:
0.00548
outside
1 - 728
Population Genetic Test Statistics
Pi
203.941364
Theta
143.825562
Tajima's D
1.00418
CLR
0.00128
CSRT
0.665966701664917
Interpretation
Uncertain
