SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06263
Annotation
PREDICTED:_uncharacterized_protein_LOC105841967_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.331
 

Sequence

CDS
ATGAACGCAGAAGCCAAAAAGAAGGTAGACGTACTATCAGAAGAACTGCTTCCGTATATCATAGCAGAACAGGAAAGAAGGACAACGTTGTACAAGAGAATAATGACCGCCATCCAGAACGGGGAGAAGGGGGTGACGATAGCCGAGATCAGGAATAAGCCCCCCTTGATCATAAGGAAAGGGTTAATGTACCGATGTCCGTCGAACCGTGCCCCCAAAGAGCCCGACGGTTCTGGCACGATCATGTGCGAAGACGAAATCGAACCGTTCCCGGTGATGTACGACTCGTGCCTAAGCGCCGAAGACAAGGAGCTTTATGTTGCGCAGAACAATTACTTCTTTTGCAACCGGCATAAAGTGGAGGGTCCGGATCTACCCAGAAACGGGAGTACCGTCATAGGGTGCGCTCCAATAGAGAGGACGTCGCTGAACTACACTACGAATAAATGTACACTTGAAGATACCGACGATGTTGTCGTCCATTACAGATATTATCCGGATAAAACATATAAATTCGTCACCGAACTGGACCCTGATCGTGAGGTGTGCGACCACTGGAATCCTTGCCAGATTGGCTACATCTACAGCTTACCTTCACCCGATCAAGCGTTGACAGCCAATGAGCTATGGCGTGAGTAA
Protein
MNAEAKKKVDVLSEELLPYIIAEQERRTTLYKRIMTAIQNGEKGVTIAEIRNKPPLIIRKGLMYRCPSNRAPKEPDGSGTIMCEDEIEPFPVMYDSCLSAEDKELYVAQNNYFFCNRHKVEGPDLPRNGSTVIGCAPIERTSLNYTTNKCTLEDTDDVVVHYRYYPDKTYKFVTELDPDREVCDHWNPCQIGYIYSLPSPDQALTANELWRE

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Pfam
PF00078   RVT_1        + More
PF00646   F-box
PF00175   NAD_binding_1
PF00667   FAD_binding_1
PF00151   Lipase
Interpro
IPR000477   RT_dom        + More
IPR001810   F-box_dom       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR003097   CysJ-like_FAD-binding       
IPR001709   Flavoprot_Pyr_Nucl_cyt_Rdtase       
IPR039261   FNR_nucleotide-bd       
IPR017938   Riboflavin_synthase-like_b-brl       
IPR023173   NADPH_Cyt_P450_Rdtase_alpha       
IPR001433   OxRdtase_FAD/NAD-bd       
IPR017927   FAD-bd_FR_type       
IPR033906   Lipase_N       
IPR013818   Lipase/vitellogenin       
IPR029058   AB_hydrolase       
SUPFAM
SSF81383   SSF81383        + More
SSF63380   SSF63380       
SSF52343   SSF52343       
SSF53474   SSF53474       

Ontologies

Topology

Subcellular location
Secreted  
Length:
212
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00021
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.32755
outside
1  -  212
 
 

Population Genetic Test Statistics

Pi
147.013307
Theta
154.146448
Tajima's D
-0.25108
CLR
104.007863
CSRT
0.303034848257587
Interpretation
Uncertain
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