Gene

KWMTBOMO06251

Annotation

hypothetical_protein_KGM_10146_[Danaus_plexippus]

Location

Bomo_Chr11(+):3345995-3347096      View in EpiBrowser

Full name

UPF0547 protein C16orf87 homolog      

Location in the cell

Mitochondrial   Reliability : 1.562 Nuclear   Reliability : 1.897

CDS

ATGATAGCTAAAAGTTGCCCGAAATGTGAAATGCAGGTAGCCGTTGCATCAAAATCGTGTAAGTGCGGACACACTTTCTTTTCTGCTCGTCGCGGTGCTGACACTTTGCCGGCCGTTGAGAATATCAAAAGAAGAACCGGTCGAGTTAGGAGATCGCAGCCTCAGTTTTATGATGCCCAGCATTACCAAAAGCAGATTAAAAGGAGAGTGAGTATAAGAGCAGTCCCGACTAACTTGTCAATTGTGAAAGCAGATGTAGCGGATCAGCTTTCAGGCTAA

Protein

MIAKSCPKCEMQVAVASKSCKCGHTFFSARRGADTLPAVENIKRRTGRVRRSQPQFYDAQHYQKQIKRRVSIRAVPTNLSIVKADVADQLSG

Similarity

Belongs to the UPF0547 family.

Keywords

Coiled coil   Complete proteome   Reference proteome  

Feature

chain  UPF0547 protein C16orf87 homolog

Uniprot

A0A212F8E4   S4PSN2   A0A3S2NC43   A0A2A4JK04   A0A2A4JLF4   A0A2W1BM54   + More
A0A194Q5X2   A0A0N0PE99   A0A1E1WW43   A0A1W4X1R6   A0A158NWX0   A0A3L8E264   A0A0L7R8L0   A0A195BW77   E2B3K0   A0A067RGL2   N6T2B1   A0A1B0DHM3   K7IYR1   A0A232F3N2   A0A1Y1LRU3   D6W749   A0A0A9Z852   A0A0P4W592   A0A0V0GCP8   A0A069DPH4   A0A0T6B3H1   A0A2A3E387   A0A1D2MSP3   A0A088A6D9   V5I7L4   F4WJ95   A0A195FM54   A0A151J6I5   A0A0P5BS53   E9GU21   A0A0P5CWI6   A0A0P5DXA8   A0A0P5SU33   A0A0P5JPV0   A0A0P5X7V4   A0A0P5A3L0   A0A0N8D7R6   A0A0P5Z3Z0   A0A0P5YB32   A0A0P4ZQY7   A0A0N8CHH7   A0A0N8C619   A0A0P5GMP6   A0A0P5WV03   A0A1B6MGE3   A0A2R7W024   A0A0P6C981   A0A0P5UPD8   A0A1B6G922   A0A0P4ZV26   A0A3B3SHD4   U5EWL5   A0A3B4CCU5   Q6DGQ4  

Pubmed

22118469    23622113    28756777    26354079    21347285    30249741    + More
20798317    24845553    23537049    20075255    28648823    28004739    18362917    19820115    25401762    27129103    26334808    27289101    21719571    21292972    29240929   

EMBL

AGBW02009738    OWR50012.1    GAIX01013493    JAA79067.1    RSAL01000109    RVE47204.1    + More
NWSH01001144    PCG72415.1    PCG72414.1    KZ150084    PZC73790.1    KQ459463    KPJ00405.1    KQ459894    KPJ19539.1    GDQN01000063    JAT90991.1    ADTU01028711    QOIP01000001    RLU26485.1    KQ414632    KOC67210.1    KQ976401    KYM92535.1    GL445346    EFN89752.1    KK852482    KDR22922.1    APGK01047241    KB741077    KB631792    ENN74264.1    ERL86109.1    AJVK01061311    NNAY01001104    OXU25119.1    GEZM01054353    GEZM01054352    JAV73737.1    KQ971307    EFA11507.1    GBHO01004071    GBRD01017636    JAG39533.1    JAG48191.1    GDKW01000042    JAI56553.1    GECL01000360    JAP05764.1    GBGD01003303    JAC85586.1    LJIG01016075    KRT81691.1    KZ288405    PBC26175.1    LJIJ01000608    ODM95908.1    GALX01006230    JAB62236.1    GL888182    EGI65673.1    KQ981490    KYN41064.1    KQ979851    KYN18837.1    GDIP01180751    JAJ42651.1    GL732565    EFX76958.1    GDIP01180750    JAJ42652.1    GDIP01155950    JAJ67452.1    GDIQ01209922    GDIP01135262    JAK41803.1    JAL68452.1    GDIQ01196929    JAK54796.1    GDIP01076168    JAM27547.1    GDIP01204452    JAJ18950.1    GDIQ01208474    GDIP01060519    LRGB01000996    JAK43251.1    JAM43196.1    KZS14274.1    GDIP01062171    JAM41544.1    GDIP01062170    JAM41545.1    GDIP01209903    GDIQ01185285    JAJ13499.1    JAK66440.1    GDIP01131231    JAL72483.1    GDIQ01111307    GDIP01052721    JAL40419.1    JAM50994.1    GDIQ01239517    JAK12208.1    GDIP01082068    JAM21647.1    GEBQ01004993    JAT34984.1    KK854155    PTY12280.1    GDIP01011208    JAM92507.1    GDIP01110166    JAL93548.1    GECZ01010817    JAS58952.1    GDIP01212155    JAJ11247.1    GANO01001361    JAB58510.1    BC076286   

Proteomes

UP000007151    UP000283053    UP000218220    UP000053268    UP000053240    UP000192223    + More
UP000005205    UP000279307    UP000053825    UP000078540    UP000008237    UP000027135    UP000019118    UP000030742    UP000092462    UP000002358    UP000215335    UP000007266    UP000242457    UP000094527    UP000005203    UP000007755    UP000078541    UP000078492    UP000000305    UP000076858    UP000261540    UP000261440    UP000000437   

Pfam

PF10571   UPF0547

Interpro

IPR040246   C16orf87-like        + More
IPR018886   UPF0547       

ProteinModelPortal

A0A212F8E4   S4PSN2   A0A3S2NC43   A0A2A4JK04   A0A2A4JLF4   A0A2W1BM54   + More
A0A194Q5X2   A0A0N0PE99   A0A1E1WW43   A0A1W4X1R6   A0A158NWX0   A0A3L8E264   A0A0L7R8L0   A0A195BW77   E2B3K0   A0A067RGL2   N6T2B1   A0A1B0DHM3   K7IYR1   A0A232F3N2   A0A1Y1LRU3   D6W749   A0A0A9Z852   A0A0P4W592   A0A0V0GCP8   A0A069DPH4   A0A0T6B3H1   A0A2A3E387   A0A1D2MSP3   A0A088A6D9   V5I7L4   F4WJ95   A0A195FM54   A0A151J6I5   A0A0P5BS53   E9GU21   A0A0P5CWI6   A0A0P5DXA8   A0A0P5SU33   A0A0P5JPV0   A0A0P5X7V4   A0A0P5A3L0   A0A0N8D7R6   A0A0P5Z3Z0   A0A0P5YB32   A0A0P4ZQY7   A0A0N8CHH7   A0A0N8C619   A0A0P5GMP6   A0A0P5WV03   A0A1B6MGE3   A0A2R7W024   A0A0P6C981   A0A0P5UPD8   A0A1B6G922   A0A0P4ZV26   A0A3B3SHD4   U5EWL5   A0A3B4CCU5   Q6DGQ4  

KEGG

101743485    no KO assigned | (RefSeq) UPF0547 protein C16orf87-like

GO

PANTHER

PTHR31101  

Length:

92

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.009

Exp number, first 60 AAs:

0.00035

Total prob of N-in:

0.42537

outside

1  -  92

 

 

Pi

212.810878

Theta

134.286875

Tajima's D

1.837056

CLR

0.120487

CSRT

0.850807459627019

Interpretation

Uncertain