Gene
KWMTBOMO06247
Pre Gene Modal
BGIBMGA001632
Annotation
PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.65
Sequence
CDS
ATGGCGTCGTTCCTATGTTTCGTTTGCCATAGCACGATCAACTCTATAACAAACGAGGCGACGCGCGAGAAATATCGCGAAGTCATAGGAATGAATTTATGTCAGGATTCGCATTTGTGCCATATATGCAGACACATACTCAACAAATTATGGTTATTCAGATCTAAATGTCTGAAGAGGAGTTCTGAGTATCCTAGTTTGTTCAGTGAAGATGTTCCTATACGTTTGCAAAGAACCGACACGGAATGCCACATACTGTGCCCGAAGTCTGACTCATGCCAAACCTTACAGACCGGGTATAGCTCCCAATACGTTTGTGATGAACGAAATTTGGACGAAAATCGTAAAGACGCAGATGATTATCACGTACACCAGCTGCAAGATGAAAGGAATTACATTGATTACTACGAAGATCTAGATGCGCTAAATGAATTTTACGGCAACGATAATCCGATTGTTGATAAAGGTGCTAACGCTTTAAACGTTTTGGACGATGATAATATTGATGGCGAAATCGAAGGTAGCGTGCCAGAACAAATAAAAATTCAAAATGAATTTATTGAAGATCACGTGCAGATGATAAATGATGATGGAAATGAGGGATCAGCTAAATTGGACGATACGAAAACGAGGAAGGTCAAAAACAAGAGGCAGAAAAAGATTTTAACTGATCTAGAAGAGCAGAAAGCGGTTTTGGACGCTATGAGGAAAGGGAAGAAGTATTTAGAGGCGGAATTCAAATGTTATAATTGCGCTGTTGGATTCCTATTTAAGGACACTTATCAGGCGCATATGATGAGACACGAAGAGTCAAACGGTGAATATCGTTGCGAGGTGTGCACCCTGCGTTTTGCGTGTGCGTCCGTATTGCGCGCGCACAGCAAGACTCATAGTCTAGAACGTTCTAGACGACGGGTTAAAGTCGACGCGAACGGTACGCAAGTCCCTTGTCACTTGTGCGGAAGGATTTTCATGGATACGACAAATTTGAAACAGCACTTAAAGAGATTCCACAATCAGAAGAACAATAACCGCACGTATTCGTGCAGCGTCTGCGGGAAGAGCTACAGCAACCAGGGAGCGGTCCGGACACATATGATAAAGTTCAACTGCGACAAATGCCCCTCGACATTCAGCAGCCCGTACACCCTGAACCAGCACAAGAAGAAGCATGATGACGTCACAGCGCTGCATCATTGTGAGACGTGTGACGTCACGTACAACAGCCGGAAGAGTCTTATGGCCCATAAGAGGAATACTTTTGCACATCAGCAGACTGTTTTCGCCTGTCGGGCGTGCAACAGGCTGTGTCCTACGAAACGCTCCCTGGAATCGCACATGGCCGCCGTCCACTCGGCGACGAAGGACTTCTGTTGCGAAGTCTGCGACGCTAGGTACACGAATCGAAAGTCTTGGGTGCGACACGTGGCGACCCACGACCCGAGCAGAGCCAAAGAGGTCTTCATATGCTACCGGTGCCCGAAGACTTTTAAGTCCCGTAGCATGCTAACCCGACATCTGAAGAAAGTTTGCGAGAAAGAAAAGTTGATAATCGAAGAAAATAATTACTATCAAGAAAACGTTTCTAATTTATAA
Protein
MASFLCFVCHSTINSITNEATREKYREVIGMNLCQDSHLCHICRHILNKLWLFRSKCLKRSSEYPSLFSEDVPIRLQRTDTECHILCPKSDSCQTLQTGYSSQYVCDERNLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGEIEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAKLDDTKTRKVKNKRQKKILTDLEEQKAVLDAMRKGKKYLEAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMAHKRNTFAHQQTVFACRACNRLCPTKRSLESHMAAVHSATKDFCCEVCDARYTNRKSWVRHVATHDPSRAKEVFICYRCPKTFKSRSMLTRHLKKVCEKEKLIIEENNYYQENVSNL
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
ProteinModelPortal
PDB
5V3M
E-value=8.47431e-12,
Score=171
Ontologies
GO
Topology
Length:
531
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00051
Exp number, first 60 AAs:
0.00037
Total prob of N-in:
0.00051
outside
1 - 531
Population Genetic Test Statistics
Pi
313.24352
Theta
205.15481
Tajima's D
1.669989
CLR
0.260733
CSRT
0.824658767061647
Interpretation
Uncertain
