Gene

KWMTBOMO06242  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001805

Annotation

PREDICTED:_28S_ribosomal_protein_S35?_mitochondrial_[Plutella_xylostella]

Location

Bomo_Chr11(+):3175045-3176365      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.978

CDS

ATGAGCATTTTAATCAAACGTTCTAAGTCTGGGTGCTTCAATAGCGCCTGCAACGTTAAATTATGGCGTCTAAACTCTACTTCGGCAGATTCCGCTCTGAAAAAGGGCGAAGAAGAAGAAGAATTTCGTGTACTAGATATCTTGAAGAAAAGGGATAAAATGCAGCGTCGAGTAGTCAAAAGAACTGATGTGCAGCCAGATAGGATCGACAGGATGGCCACAAACCAGAACTGGGGGAATGTGTGGCCTGGTCCGAAAACTTTCCACCCGTCTTCGGTGCCATTACCGATACGTCAGGGCTACGTACCAAAGGGTCAAGCACCGCCAGGTAAAAAAGCGAATGCAGAATTAATGAAAATACCAAATTTCCTTCACTTAACACCACCAGTTATCAAGAGCCAGTGTGAAGCCTTAAAACAATTTTGTACGGAATGGCCGAATCTACTCAACTCTGAGGAAAGTATAGAGAAGCATTATCCCTTAGAAATTATAAGTTCAGATTACTGTCACGCAAGTCCATCTATCCGTAACCCGTTAGCACGCGTCGTGATCTTAAGAGTTCAATTAGCAGACCTCAAACTCGATAAACATGCAACAGACAAGTTTAAGAGGCTGGTCGGTGACAGGTACGACCCAAAAACAGATTTAGTGACGATCACAGCGGATCGTTGTCCAACTAAAGTACAAAACTTGGACTATGTCAATTATTTGTTGACTGCATGCTACCATGAGTCGTGGAATTTTGAAGATTGGGAGAAGGAGAAGACCGAGGACGACATGGAGTATTATGACTGGGATAATAATGCTTCAAAGAGGAGTTTGATTGATTGGTATCTTCGTGTTAAGAATGAATTGAAAATCATGAATGATGAAGAATATAAAGCATTTGATATAAGCCAAATAGAAAATGGAGCCCAATATAAAGCGTCTGTATCAAAGTATATGAATGAAGGTGAAAATCCACAGACCGTGCAAGAATATAGTATCGCCGTTAGAAAGCTGTTTGGCTTGCCACAGAAGAAATTAGTTTAA

Protein

MSILIKRSKSGCFNSACNVKLWRLNSTSADSALKKGEEEEEFRVLDILKKRDKMQRRVVKRTDVQPDRIDRMATNQNWGNVWPGPKTFHPSSVPLPIRQGYVPKGQAPPGKKANAELMKIPNFLHLTPPVIKSQCEALKQFCTEWPNLLNSEESIEKHYPLEIISSDYCHASPSIRNPLARVVILRVQLADLKLDKHATDKFKRLVGDRYDPKTDLVTITADRCPTKVQNLDYVNYLLTACYHESWNFEDWEKEKTEDDMEYYDWDNNASKRSLIDWYLRVKNELKIMNDEEYKAFDISQIENGAQYKASVSKYMNEGENPQTVQEYSIAVRKLFGLPQKKLV

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

Uniprot

H9IX22   A0A2A4K395   A0A1E1WVF2   A0A2W1BK93   A0A2H1VKB2   A0A3S2LQK2   + More
A0A0N1I9U9   A0A194Q4L8   A0A212EPG1   A0A0L7L2T0   A0A1W4XBB6   D6WDJ0   A0A0K8TT09   A0A0T6AYJ2   J3JTF0   U4U7S8   A0A232F1D7   N6T642   A0A195CBH1   A0A151X6X6   A0A195FF89   A0A158NSZ8   A0A2J7QJ66   E2A1Y3   A0A182L3Z5   A0A026WWM0   W8C7T8   Q7QIE1   A0A182IX80   A0A1B0DD95   A0A034WPA4   A0A182QF79   F4WY59   A0A182V6J2   A0A182I6D2   A0A195EHH3   A0A084WMW5   A0A182R6P4   A0A182TRX7   A0A0L7QS73   A0A182X272   A0A182MEZ2   A0A182Y890   A0A182KEN5   A0A0K8UAX5   A0A0L0CPV4   A0A1B0GJ66   A0A182PIW2   A0A336M7S7   R4G3N6   A0A0P4VMQ5   A0A023EPU6   U5EK12   A0A1Q3FBX4   E2C8E7   A0A182GF65   Q16WG3   A0A2M4AP35   A0A2M4ANQ8   A0A2M4AP49   A0A2M4BT49   A0A1S4FLQ0   A0A1Q3FCM8   A0A1Q3FEB1   A0A1L8DRJ5   A0A2M4BTG1   A0A151I467   A0A2M3Z6I5   A0A2M4BTB4   A0A2M4BTD5   W5JL09   A0A2M3ZHI2   A0A1L8DRJ8   A0A1I8MYC5   B4H1N5   A0A182WI36   Q29E49   A0A023ER01   A0A1B6KVT3   B4LE29   A0A023F7Q4   B4IYH8   A0A1A9UGC9   A0A0V0G649   A0A182N7G2   J9K252   B0WC73   Q9VZX6   A0A2M3Z6R3   B4MN34   C4WVK3   A0A224XHB3   D3TM03   A0A1A9W4C4   T1H0S3   A0A1A9YI98   A0A1Y1NCL6   A0A1I8P9U8   A0A1B0AVU1   A0A2R7W5Q1  

Pubmed

19121390    28756777    26354079    22118469    26227816    18362917    + More
19820115    26369729    22516182    23537049    28648823    21347285    20798317    20966253    24508170    30249741    24495485    12364791    14747013    17210077    25348373    21719571    24438588    25244985    26108605    27129103    24945155    26483478    17510324    20920257    23761445    25315136    17994087    15632085    25474469    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    28004739   

EMBL

BABH01021253    NWSH01000236    PCG78132.1    GDQN01000049    JAT91005.1    KZ149995    + More
PZC75459.1    ODYU01003029    SOQ41289.1    RSAL01000344    RVE42340.1    KQ460038    KPJ18387.1    KQ459463    KPJ00487.1    AGBW02013491    OWR43347.1    JTDY01003285    KOB69803.1    KQ971322    EFA00783.1    GDAI01000538    JAI17065.1    LJIG01022529    KRT80098.1    BT126506    AEE61470.1    KB631768    KI210422    ERL86000.1    ERL96257.1    NNAY01001275    OXU24525.1    APGK01050964    KB741180    ENN73123.1    KQ978023    KYM98045.1    KQ982476    KYQ56050.1    KQ981636    KYN38887.1    ADTU01025462    NEVH01013559    PNF28638.1    GL435856    EFN72559.1    KK107078    QOIP01000011    EZA60475.1    RLU16865.1    GAMC01007836    GAMC01007832    GAMC01007830    GAMC01007828    JAB98719.1    AAAB01008807    EAA04180.4    AJVK01031793    GAKP01002805    JAC56147.1    AXCN02000573    GL888439    EGI60816.1    APCN01003620    KQ978957    KYN27322.1    ATLV01024521    KE525352    KFB51559.1    KQ414758    KOC61483.1    AXCM01002040    GDHF01028487    GDHF01016863    JAI23827.1    JAI35451.1    JRES01000080    KNC34378.1    AJWK01019416    UFQS01000523    UFQT01000523    SSX04566.1    SSX24929.1    ACPB03016769    GAHY01002065    JAA75445.1    GDKW01002854    JAI53741.1    GAPW01002525    JAC11073.1    GANO01001991    JAB57880.1    GFDL01009964    JAV25081.1    GL453666    EFN75782.1    JXUM01059297    KQ562045    KXJ76823.1    CH477566    EAT38934.1    GGFK01009057    MBW42378.1    GGFK01009099    MBW42420.1    GGFK01009222    MBW42543.1    GGFJ01007098    MBW56239.1    GFDL01009797    JAV25248.1    GFDL01009213    JAV25832.1    GFDF01005002    JAV09082.1    GGFJ01007153    MBW56294.1    KQ976472    KYM83990.1    GGFM01003392    MBW24143.1    GGFJ01007176    MBW56317.1    GGFJ01007178    MBW56319.1    ADMH02001223    ETN63600.1    GGFM01007253    MBW28004.1    GFDF01005001    JAV09083.1    CH479202    EDW30212.1    CH379070    EAL30213.2    GAPW01002537    JAC11061.1    GEBQ01024424    JAT15553.1    CH940647    EDW70072.1    GBBI01001311    JAC17401.1    CH916366    EDV97651.1    GECL01002600    JAP03524.1    ABLF02009803    ABLF02009804    DS231886    EDS43318.1    AE014296    BT016117    AAF47688.1    AAV37002.1    GGFM01003468    MBW24219.1    CH963847    EDW73590.1    AK341561    BAH71923.1    GFTR01004539    JAW11887.1    EZ422455    ADD18731.1    CAQQ02387843    GEZM01006628    JAV95674.1    JXJN01004388    KK854332    PTY14748.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000192223    UP000007266    UP000030742    UP000215335    UP000019118    UP000078542    UP000075809    UP000078541    UP000005205    UP000235965    UP000000311    UP000075882    UP000053097    UP000279307    UP000007062    UP000075880    UP000092462    UP000075886    UP000007755    UP000075903    UP000075840    UP000078492    UP000030765    UP000075900    UP000075902    UP000053825    UP000076407    UP000075883    UP000076408    UP000075881    UP000037069    UP000092461    UP000075885    UP000015103    UP000008237    UP000069940    UP000249989    UP000008820    UP000078540    UP000000673    UP000095301    UP000008744    UP000075920    UP000001819    UP000008792    UP000001070    UP000078200    UP000075884    UP000007819    UP000002320    UP000000803    UP000007798    UP000091820    UP000015102    UP000092443    UP000095300    UP000092460   

PRIDE

H9IX22    Q9VZX6   

Pfam

PF10213   MRP-S28        + More
PF00225   Kinesin

Interpro

IPR039848   Ribosomal_S24/S35        + More
IPR019349   Ribosomal_S24/S35_mit       
IPR027640   Kinesin-like_fam       
IPR001752   Kinesin_motor_dom       
IPR036961   Kinesin_motor_dom_sf       
IPR027417   P-loop_NTPase       

SUPFAM

SSF52540   SSF52540       

Gene 3D

3.40.850.10    

ProteinModelPortal

H9IX22   A0A2A4K395   A0A1E1WVF2   A0A2W1BK93   A0A2H1VKB2   A0A3S2LQK2   + More
A0A0N1I9U9   A0A194Q4L8   A0A212EPG1   A0A0L7L2T0   A0A1W4XBB6   D6WDJ0   A0A0K8TT09   A0A0T6AYJ2   J3JTF0   U4U7S8   A0A232F1D7   N6T642   A0A195CBH1   A0A151X6X6   A0A195FF89   A0A158NSZ8   A0A2J7QJ66   E2A1Y3   A0A182L3Z5   A0A026WWM0   W8C7T8   Q7QIE1   A0A182IX80   A0A1B0DD95   A0A034WPA4   A0A182QF79   F4WY59   A0A182V6J2   A0A182I6D2   A0A195EHH3   A0A084WMW5   A0A182R6P4   A0A182TRX7   A0A0L7QS73   A0A182X272   A0A182MEZ2   A0A182Y890   A0A182KEN5   A0A0K8UAX5   A0A0L0CPV4   A0A1B0GJ66   A0A182PIW2   A0A336M7S7   R4G3N6   A0A0P4VMQ5   A0A023EPU6   U5EK12   A0A1Q3FBX4   E2C8E7   A0A182GF65   Q16WG3   A0A2M4AP35   A0A2M4ANQ8   A0A2M4AP49   A0A2M4BT49   A0A1S4FLQ0   A0A1Q3FCM8   A0A1Q3FEB1   A0A1L8DRJ5   A0A2M4BTG1   A0A151I467   A0A2M3Z6I5   A0A2M4BTB4   A0A2M4BTD5   W5JL09   A0A2M3ZHI2   A0A1L8DRJ8   A0A1I8MYC5   B4H1N5   A0A182WI36   Q29E49   A0A023ER01   A0A1B6KVT3   B4LE29   A0A023F7Q4   B4IYH8   A0A1A9UGC9   A0A0V0G649   A0A182N7G2   J9K252   B0WC73   Q9VZX6   A0A2M3Z6R3   B4MN34   C4WVK3   A0A224XHB3   D3TM03   A0A1A9W4C4   T1H0S3   A0A1A9YI98   A0A1Y1NCL6   A0A1I8P9U8   A0A1B0AVU1   A0A2R7W5Q1  

PDB

6GAZ     E-value=1.10464e-72,     Score=694

KEGG

101742763    K17413 small subunit ribosomal protein S35 | (RefSeq) 28S ribosomal protein S35, mitochondrial

GO

GO:0032543   GO:0003735   GO:0005739   GO:0005840   GO:0005763   GO:0016021   GO:0008017   GO:0005524   GO:0003777   GO:0007018   GO:0006412  

PANTHER

PTHR13490   PTHR24115  

Length:

343

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00014

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02754

outside

1  -  343

 

 

Pi

235.608935

Theta

198.735547

Tajima's D

0.540846

CLR

1.291843

CSRT

0.528723563821809

Interpretation

Uncertain