SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06239  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001803
Annotation
PREDICTED:_putative_aminopeptidase_W07G4.4_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 2.182
 

Sequence

CDS
ATGCCGTTCGTCGAATACAAGCTATACGAGAATATTTTCATCGAAACAAACCTTCAGTCGGCTGATTACGATGCGGTGATCTTAATCCTTTACCCCGAGGAACTTAACGTGCCATTGCCGAGACATATCGGGAGCTTCGTCGACGGAATCGGGAAACTTGACAAGCACATCCACAAGTCGGCGACGGTGTGGCAATGCGACTACGTATCTGGCGGCAGGATTATATTGGCCCCGACCGGGAAGATCACTCCTTACCACGACGCTAGAGTGGTGAAGGAAGCAGCGTACAAAGGAATGACCCGTGCGCTGGACGCCGGCGCGAAAAGACCTTTACTAGTCGTTCAAAACGTTGTAGACTTTCCGGACGGACAATTGGTAGCGATCCTCGGAGCCCTGGAAGCGTTGTACGTGCCCCTCCAGATGCGAGAGAGAGACAGCACGAGGAACTTCTCAAGAATCGGTCTCCACGCCGAAGAAAAACGAACTGAGAACTTCGAAAAGATCGTTCGCAATGCCATAGCGCTTGAACGCGCTCGCGTGCTAGCCAGAGACATCGGAGGCGGTGATCCCGAGAGAATGAGTCCGATAAAGATAGCCGAACATCTGAAGTCAACCTTCAGCGGTTACAGCAACATCGAAGTGCGGATTGTCGAGGACGAAGATATAATTAATAAGGACTATCCGCTCTTATCGGCCGTGTCAAGAGCGGCCAGCCACATAGACCGGCACAAACCCCGAGTTGTCGAAATCGAATACAAGCCTTCGGATCCTGCAAGGATTAGCGAAACGCTGCTGCTTGTCGGCAAGGGAGTCACTTACGACACTGGCGGCGCTGATATAAAGATTTCCGGTAAGATGGCAGGTATGGCGAGAGATAAATGCGGAGCCGCCGCCGCCGCGGGCTTCCTTAAGGCCTGCTCCATACTGAAGCCTCCGCATTTGAAAGTGGTCGCAGCGCTGTGCCTCTGCAGAAACTCGATCGGCGAAGACTCTTATGTCTCCGACGAATTGCTCTTATCGAAGAGCGGGAAGACGGTGCGCGTCACGAACACAGACGCTGAAGGCCGCTTCGCTATGGCCGATGCGTTGTACAAGTTCGCCGAAACTGCTGCCCAAGAACTAAACCCGCATTTATATACCATAGCAACACTGACAGGCCATGCTAGAGCCTGCTACGGAAACTACGTGGCTGCTATGGACAATCACAGTGCTAGAGCCACGAATCACTCCACTAGGCTGCAGTTCAGCGGCACCAGAGTGTCAGAGCCGATTGAAGTTTCATACGTCAGGCCCGAAGACTTGGCTGTCAACGTTGGGAAGTGCAAAGGCGATGATCTACTTCAAGTGGATATGGAGAAGACCTTCCGCCATCATCAGCTGGCCGCGGGCTTCCTGATCAAAGTCAGCGGCTTGGAAGATAAGAACGTGAAGTACACTCATTTGGACATAGCTGGAGCGGCCGGTTCGCCTCCCTGCGAACCAACCGCCGTTCCAATATTGTCTTTGTGTCATTTACATAAAGTACTACTCTGA
Protein
MPFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHIGSFVDGIGKLDKHIHKSATVWQCDYVSGGRIILAPTGKITPYHDARVVKEAAYKGMTRALDAGAKRPLLVVQNVVDFPDGQLVAILGALEALYVPLQMRERDSTRNFSRIGLHAEEKRTENFEKIVRNAIALERARVLARDIGGGDPERMSPIKIAEHLKSTFSGYSNIEVRIVEDEDIINKDYPLLSAVSRAASHIDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGKMAGMARDKCGAAAAAGFLKACSILKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSGKTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHSARATNHSTRLQFSGTRVSEPIEVSYVRPEDLAVNVGKCKGDDLLQVDMEKTFRHHQLAAGFLIKVSGLEDKNVKYTHLDIAGAAGSPPCEPTAVPILSLCHLHKVLL

Summary

EMBL
BABH01021250    NWSH01000236    PCG78134.1    KQ460038    KPJ18385.1    JTDY01003285    + More
KOB69804.1    ODYU01009529    SOQ54027.1    KQ459463    KPJ00486.1    AGBW02013491    OWR43349.1    KQ980800    KYN12835.1    KQ971372    EFA10568.1    AK416933    BAN20148.1    NEVH01017441    PNF24597.1    GEZM01028092    JAV86472.1    PNF24594.1    GBYB01012339    GBYB01012340    JAG82106.1    JAG82107.1    ACPB03018501    GEMB01000392    JAS02729.1    CM000070    EAL28043.1    KRT00415.1    GDKW01002191    JAI54404.1    CH479179    EDW24309.1    KK852568    KDR21177.1    AAZX01011166    CH480815    EDW42263.1    PZQS01000005    PVD31088.1    CM000160    EDW97291.1    KRK03639.1    CH954181    EDV49172.1    CH964272    EDW84586.1    KRG00076.1    OUUW01000005    SPP80181.1    CM000364    EDX13024.1    GDHC01003584    JAQ15045.1    AE014297    AY051926    AAF54991.2    AAK93350.1    AAN13593.1    AAN13594.1    AHN57315.1    KU365960    KU932335    ANJ04676.1    APA33971.1    CH477258    EAT45789.1    GFDL01014535    JAV20510.1    JH432192    GFDG01001541    JAV17258.1    GAHY01001868    JAA75642.1    PNF24595.1    KQ414581    KOC70929.1    GFTR01006704    JAW09722.1    GEMB01000391    JAS02730.1    GEBQ01025939    GEBQ01004246    JAT14038.1    JAT35731.1    KK107199    EZA55609.1    CH933806    EDW14721.1    GAPW01000982    JAC12616.1    NNAY01000338    OXU29093.1    KA647519    AFP62148.1    JXUM01063346    KQ562244    KXJ76319.1    AXCN02000100    AAAB01008851    EAA07361.4    EGK96638.1    APCN01002215    AXCM01003454    DS232065    EDS33687.1    GECZ01027612    JAS42157.1    GAKP01016316    JAC42636.1    JXJN01016622    GAKP01016315    JAC42637.1    JRES01001623    KNC21373.1    CH902617    EDV43698.2    KPU80425.1    GBYB01012338    JAG82105.1    GECL01003778    JAP02346.1    GGFK01006344    MBW39665.1    GAMC01009029    JAB97526.1    GDHF01025841    GDHF01023367    JAI26473.1    JAI28947.1    GAMC01009030    JAB97525.1    EZ422241    ADD18517.1    CH940656    EDW58500.1    KRF78326.1    CVRI01000066    CRL05934.1    GBXI01005406    GBXI01001718    JAD08886.1    JAD12574.1    GBXI01007742    JAD06550.1    KQ981560    KYN39967.1    KQ434902    KZC11125.1    GANO01001123    JAB58748.1    CH916377    EDV90694.1    KQ435706    KOX80189.1   
Pfam
PF00883   Peptidase_M17        + More
PF01400   Astacin
PF05383   La
PF13862   BCIP
Interpro
IPR011356   Leucine_aapep/pepB        + More
IPR000819   Peptidase_M17_C       
IPR006607   DM15       
IPR024079   MetalloPept_cat_dom_sf       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR001506   Peptidase_M12A       
IPR006630   La_HTH       
IPR025602   BCP1_family       
SUPFAM
SSF46785   SSF46785       
Gene 3D
PDB
3KZW     E-value=1.3697e-19,     Score=238

Ontologies

Topology

Length:
510
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01336
Exp number, first 60 AAs:
0.00081
Total prob of N-in:
0.00098
outside
1  -  510
 
 

Population Genetic Test Statistics

Pi
200.322799
Theta
177.59225
Tajima's D
0.235317
CLR
3.043698
CSRT
0.431928403579821
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 DYPLLSAVSR 100.00 5e-10
28556443 CGAAAAAGFLK 100.00 5e-10
28556443 VEIEYK 100.00 7e-09
28556443 DYPLLSAVSR 100.00 2e-07
26280517 ACVIANQANSPIYIVHMMSK 100.00 1e-05
26280517 SAISTPGGGGTTAQSKPTSGK 100.00 9e-05
28556443 VSEPIEVSYVRPEDLAVNVGK 100.00 9e-05
28556443 FAMADALYK 100.00 1e-04
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