SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06228  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001643
Annotation
hypothetical_protein_RR46_07074_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.236
 

Sequence

CDS
ATGGCTGCGCGCGTGTCTGCTGAGGGCGCAGGACCCTCTTACGCGTCCGTGCTCAACTTCAAAGGAGGCGAAAGTAATAAAGAAAACATTGAGGCCCACGCAGAGGAGGCGTTAGACGCGCCTCCCAGGCCAGATATTGAAGAGGAGGAGGGCTTCGTACCGGTCATCTCTCATGGACGGCGTCCTGGTAAAAACCGGAGGGACAGGGAACGGAAAGCACCCCCGAGAGCTCATAAAACACCACAACAGCATGCTGACCCTCAGCCCACAGCGGAGCAACAGCAACAAGCTGCAGAACAACAGCCGAAGAAGTTTGTTGAAGCGCCTATTCCAAAAGTCAATCCGTGGCAGGTCCGCGGAGGTAGCACGGGAGTGCCACCGCCAGCGCCACCAGCCTTGGAACAAGAGAAGAGGTCGCCGTTGCAGCCGCAGCAGCAGGGGAGGGTACAGACTGAACACACTCCAGCACCGGCCGTGATACCGAAAGCTCCGGCCGTAATAAAAGCTCCGAAGAACGCAAAGATAAATCAGAAGGTATTGTGA
Protein
MAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRAHKTPQQHADPQPTAEQQQQAAEQQPKKFVEAPIPKVNPWQVRGGSTGVPPPAPPALEQEKRSPLQPQQQGRVQTEHTPAPAVIPKAPAVIKAPKNAKINQKVL

Summary

Pfam
PF05383   La
Interpro
IPR006607   DM15        + More
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR006630   La_HTH       
SUPFAM
SSF46785   SSF46785       
Gene 3D

Ontologies

Topology

Length:
180
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00016
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.15070
outside
1  -  180
 
 

Population Genetic Test Statistics

Pi
198.378918
Theta
159.035838
Tajima's D
1.010756
CLR
0.290328
CSRT
0.664016799160042
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号