SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06226  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001645
Annotation
PREDICTED:_uncharacterized_protein_LOC101741417_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.345
 

Sequence

CDS
ATGACCGCACAAAAGTGCGTTGTCGAAGGCTGCAATCTGGAATATGATGTGGTCTGCAGCTTCTCATTTTACAATGCCAATGTGACATCGGACAATGAACTCCAACGGCAGGAATGGATTGATGGTGCTATGCATGAGCAAAGTGAATGCCTCTGGAGGCATGTCAGCTTACAGCTGTGTGGATACCATTTTGAGCTGGACAACCAGGGACTATGGATTGACTCCCCGATGCTACCCGAACTCTTGACCGTGCAAGAAAAACCACCAGCATTGACACCATCAGCTGAAGACACTAGAATCGCTGAGATCGTTCGAATGGATCACAATTACAGCGTCGAGCCCCAGAACAAGGAGAACCCTGATAACATATCTCGACTTAACGTCAGACAACTCGTCGACACGTTAGGATATCTGTCCCTGAAGAATCTCCAAAGGAAACAGCTTTGGGTCGTGAAGGTGGAAACTGACAAGGCTGAGGCGTCGATAACCCAGTCGGAACAAGTCATCACCAAAATGCAAGACTCCAAGCAGACCATAGAGATAATACCACAAACATCGACTTCAGCCGATCAGCCGGCCAGCGAAGTGCTACAGATAATGGACGAAAACGCCATACCGGAGAACTTTATATACGAAATAGCCGAAGAACAAGAGATATCAATGGAGGAAGTCAAAGAGATACCTTCTTCGGGGAACCAGGAGTGGATCGTGAATATAATACCGGAGGAAACGAAGAATAAATACGCTTACATCAAACACTGCAGTACGGGGAAAAAGAAGAGACATTTCACAGCCGATGTGAACGAGATAACATTACAAGGTGACTTTGAGAATTACTACATACTGCCAGACGTCGATCCGTCTGTCGGCGTCGAGATAACCACGAGCTACGAGCCGGAGAACTACATAGTCGAGGAGTACCAGCATCTGGTGCTTGAGGATCGTCCCAAGAAACGCGTCAAAGAGGAGGGCAGCGGGAAAAAGAAACGCAAGAGACTGTCTTCGGGGCGGGACGACATCAAAACCGAACCAGACGATTGGGTCATCGAGAATGCAATCTCCTATGACAACGATGAGTTTGATGACAAGAAAGCAGCGTCCAGGGTGCGGAGAAAAAATAAAAAGTACCTAGGCTTCGATTTTGTTACGTAA
Protein
MTAQKCVVEGCNLEYDVVCSFSFYNANVTSDNELQRQEWIDGAMHEQSECLWRHVSLQLCGYHFELDNQGLWIDSPMLPELLTVQEKPPALTPSAEDTRIAEIVRMDHNYSVEPQNKENPDNISRLNVRQLVDTLGYLSLKNLQRKQLWVVKVETDKAEASITQSEQVITKMQDSKQTIEIIPQTSTSADQPASEVLQIMDENAIPENFIYEIAEEQEISMEEVKEIPSSGNQEWIVNIIPEETKNKYAYIKHCSTGKKKRHFTADVNEITLQGDFENYYILPDVDPSVGVEITTSYEPENYIVEEYQHLVLEDRPKKRVKEEGSGKKKRKRLSSGRDDIKTEPDDWVIENAISYDNDEFDDKKAASRVRRKNKKYLGFDFVT

Summary

Interpro
IPR006612   THAP_Znf       

Ontologies

Topology

Length:
383
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00254
Exp number, first 60 AAs:
0.00254
Total prob of N-in:
0.02241
outside
1  -  383
 
 

Population Genetic Test Statistics

Pi
168.330766
Theta
170.671827
Tajima's D
0.636002
CLR
0.312665
CSRT
0.556722163891805
Interpretation
Uncertain
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