Gene
KWMTBOMO06219
Pre Gene Modal
BGIBMGA001795
Annotation
PREDICTED:_pollen-specific_leucine-rich_repeat_extensin-like_protein_2_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 3.169
Sequence
CDS
ATGAGGTCCCAATCTTCGGGCTACCAAGGTTACCCTTACATCAACCCACCGGTGGTGGAGGCACCTTCGGTAGACCCAGCATCGGCAGCAGCTAACGCCGCGCGGTGGTCGAGTATGCCACGGCGACAAGTCACACGTTTAGATAAGGAAAGGGTGGTGTTTATAAACATCCCCCAAGATTTGGATCGACCGAGTCGGATTAATGAGGCACAAAATCCTACAACGTCAAATGCAGCTTCATCTGCTAATGATATTATCACGGAACATCAGTTACCGGATAGAGCTGGTGGAAGCAACTTGCACCAGACAGATGACAACGAAAGAGACAGCCAGGATCCCGTGAAAGACAATCCCGACGACGATCCGGTGGTGTACATAGATTTACCGAGCGATCCGTGCGGAGGCAACGCAGCTCATGCGAGAGAGGAAATCGAAGCCCCAGAACCGGGGTTCCTCCAGGACACGATCTTTTACGACCCGTTCGACGATAGACGAATTGATATGCCAAAGGTAAATCCGAGTCTGCATTCCATTGGTTCCGAGACGGACAGCGCTTCGGGCCAGAGCAGTTCCGTACGAAGACCGGCTCCGGAAAGACCCACCACTTTGGAGATTAACAGGATTTTAAGGCCCGCACCTACGCCCAACTCTCCTGTCAGCGCCGGCACATCAATCAACTCGACGCCGTCGTCGAGATTCCCTGACGGCTACCACCTCAACAGGGCAACCCCGGAAACCAGTCTGCCGTCACCGCTGCCGGTGACCGCTTTTCCTGAACCGCCACCAGCTTACACCGAGATCGACGCGACCCCTTCGCCGCTAAGTACTCCGCCGCACCCTCAAGATTCAACTCCGCCGAGGACACAAGTCATAACAGCTACACCCATTTCCGGGGATATAGCAAACTCGTCTAGAAAGTACTTGGATTGCCACCACTGCGGCATGAGAGTACACACGCTGGTCGTGAGAGAAATAGGGCTCTTGAACCACGTCATAGCGCTGATCTGCCTTGTCCTCTGCTTGCTGCCTCTCATCTGCCTGGTCTACTTATTGGACTGCTTCAAGAACCATAACCACTACTGCCCTAACTGCAACAAGGTCATCGGTTACCAGCTGCCCTTCAACTACAAGAAAATCTTCTACGTTAGCTGA
Protein
MRSQSSGYQGYPYINPPVVEAPSVDPASAAANAARWSSMPRRQVTRLDKERVVFINIPQDLDRPSRINEAQNPTTSNAASSANDIITEHQLPDRAGGSNLHQTDDNERDSQDPVKDNPDDDPVVYIDLPSDPCGGNAAHAREEIEAPEPGFLQDTIFYDPFDDRRIDMPKVNPSLHSIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQVITATPISGDIANSSRKYLDCHHCGMRVHTLVVREIGLLNHVIALICLVLCLLPLICLVYLLDCFKNHNHYCPNCNKVIGYQLPFNYKKIFYVS
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF10601 zf-LITAF-like
ProteinModelPortal
Ontologies
KEGG
GO
PANTHER
Topology
Length:
383
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.50406
Exp number, first 60 AAs:
0.00065
Total prob of N-in:
0.07071
outside
1 - 328
TMhelix
329 - 351
inside
352 - 383
Population Genetic Test Statistics
Pi
190.568879
Theta
145.273695
Tajima's D
1.057052
CLR
0
CSRT
0.683065846707665
Interpretation
Uncertain
