SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06209
Pre Gene Modal
BGIBMGA001790
Annotation
cyclin_g_[Danaus_plexippus]
Full name
Cyclin G      
Location in the cell
Cytoplasmic   Reliability : 1.095 Mitochondrial   Reliability : 1.079 Nuclear   Reliability : 1.326
 

Sequence

CDS
ATGTTGAGAGCGGGCGCGAGGCACCCGGATGCTGCTGAGTGTCGTTCGCCGGTCGCGTCCACGTCACGTGACGACGTCGACTCGGCCCAGCAACTGTACGCTACGCTCAACGAGTACCTGCTCCTCGAGCAAAAGTCTCAGCCGAAACTGCGCTTGCCCGCGGAGTCTGAGAGCGGCGAAGTGACGACCGGCGCTAGGGATGGCGCAGCGCACGTGTTGCGCTGTCTCAAAGTCTGGTTCGATCTACCCGCGGACGTGCTCATCGGGGCCATCAATCTGTTCGACAGGTTTCTGACCAAGATGAAGGTGAGGCCGTGTCATGTGCCGTGCATTACTGTCTCCTGCATGAACATATCCATAGACGAGTATGCGGCTAGGACCAACATAAAAAGGACAGTGTCAATAGAGGAGCTGGTGTCTATCTCACAATCGGCCTGCACCGCTGGCGACGTGTCCAGGATGTCTCGAGTCATTCAGGACAAGCTGGGATTGGCACGAGGAACTGTCAGCGTGACGGCTCTGCACTGGCTCAGACTGTATCGGAAGCTGTTGCTGATGCATGCTGACGCCGGAGACGTACTGGCGCAGGAAAGCGAGCTGGTGAATCTACTGGAGATAGCCGTGTGCGACGCCACCTGCGCCAACGCTCGGACCAGCGAACTGGCACTCGTCTTACTCTTCCATAAACTAGAAAAACAACTCGTCGAATGGTCTGAAAAAGGAATGACTGTCCCGGAAAAGGTTTTCTACATGTACGACTTTGCCAGGCAACTGCAAATTCATTGTCATATGTCGGACGCTTCCCTGAGCGGCGTCGGCGGCGCCGTGCGCGGCGTGGTGCAGCGCTACGAGTCGCGCAGCGCGCAGCCGCTCCGGCAGCGACTCGTCTGGAGACTCTCCGAGAGAACCCTCAAGGTGCTCCGCCCTACCGATCGCCTCACATCCCTGCTGCCCACCATTGAGGAACAGCACTTCGCGGTCGAGGCGACGCCCACAAGAACCAGATCTGGAAGCGAAAGTAGTGTAAGCGAAGAGACATCGGATTGGCCCAGAAGTCCGTTGCTGCCGGTTTATTGTGACAATTGA
Protein
MLRAGARHPDAAECRSPVASTSRDDVDSAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVTALHWLRLYRKLLLMHADAGDVLAQESELVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQIHCHMSDASLSGVGGAVRGVVQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPTIEEQHFAVEATPTRTRSGSESSVSEETSDWPRSPLLPVYCDN

Summary

Description
Cyclin with roles in multiple processes including transcription, meiotic recombination repair, cell cycle regulation, and promotion of normal growth and metabolism (PubMed:18667003, PubMed:18286205, PubMed:21311225, PubMed:22976300, PubMed:25995770, PubMed:26274446). Binds to the promoter region of the homeobox gene Abd-B and is involved in maintaining Abd-B expression in the pupal epithelium (PubMed:18667003, PubMed:18286205). Involved in the transcriptional repression of the homeotic genes Scr and Ubx (PubMed:25995770). Plays a role in meiotic recombination repair of DNA double-strand breaks which ensures efficient translation of grk and promotes grk activity in the oocyte, leading to oocyte dorso-ventral axis formation following secretion of grk from the oocyte and its binding to Egfr in the directly overlying follicle cells (PubMed:23121330, PubMed:22976300). Negatively regulates the binding of serine/threonine-protein kinase Akt1 to the protein phosphatase 2A subunit wdb, promoting normal growth and metabolism (PubMed:26274446). Required for the formation of bilateral symmetry (PubMed:21998598). Negatively regulates cell cycle progression by preventing G1 to S transition and retarding S-phase progression (PubMed:21311225).
Subunit
Interacts with corto (PubMed:18286205). Interacts with the cyclin-dependent kinases Cdk2 and Cdk4 (PubMed:21311225). Interacts with Brca2 and Rad9 (PubMed:22976300). Interacts with polycomb protein Asx (PubMed:25995770). Interacts with protein phosphatase 2A subunit wdb (PubMed:26274446).
Similarity
Belongs to the cyclin family.
Belongs to the cyclin family. Cyclin G subfamily.
Keywords
Cell cycle   Cell division   Chromosome   Complete proteome   Cyclin   Developmental protein   DNA damage   DNA repair   DNA-binding   Growth regulation   Meiosis   Reference proteome   Transcription   Transcription regulation  
Feature
chain  Cyclin G
EMBL
BABH01021192    KZ150332    PZC71347.1    RSAL01000142    RVE46024.1    GDQN01010950    + More
GDQN01005931    JAT80104.1    JAT85123.1    AGBW02009730    OWR50021.1    ODYU01010788    SOQ56104.1    KQ459463    KPJ00517.1    JTDY01000484    KOB76967.1    GALA01001174    JAA93678.1    CH477318    EAT43711.1    GDAI01001553    JAI16050.1    GFDL01009442    JAV25603.1    GFDL01009455    JAV25590.1    DS231848    EDS36617.1    GANO01003149    JAB56722.1    GAPW01001231    JAC12367.1    GGFJ01006897    MBW56038.1    GGFJ01006878    MBW56019.1    GGFL01003011    MBW67189.1    GGFM01000377    MBW21128.1    GGFK01001243    MBW34564.1    GGFJ01004208    MBW53349.1    GGFJ01004209    MBW53350.1    GGFJ01004207    MBW53348.1    GGFJ01004206    MBW53347.1    NNAY01001351    OXU24274.1    AXCN02001149    AAZX01002312    APCN01000910    AAAB01008987    EAA01373.5    AXCM01000028    KQ760869    OAD58761.1    JXUM01024901    JXUM01024902    JXUM01024903    JXUM01024904    JXUM01024905    JXUM01024906    KQ560705    KXJ81212.1    ADMH02001998    ETN60048.1    KQ434856    KZC08726.1    KZ288222    PBC32115.1    JR046204    AEY60152.1    GDIQ01040702    JAN54035.1    GEBQ01016503    JAT23474.1    KQ435814    KOX72669.1    NEVH01025127    PNF16087.1    GL449769    EFN82026.1    KK852463    KDR23337.1    KQ414614    KOC68855.1    GFDF01006851    JAV07233.1    GEDC01019266    GEDC01010615    JAS18032.1    JAS26683.1    GBYB01001113    GBYB01001114    JAG70880.1    JAG70881.1    GECU01037692    GECU01025187    JAS70014.1    JAS82519.1    GECZ01031514    GECZ01020287    GECZ01019145    GECZ01018287    GECZ01013263    GECZ01004190    GECZ01003753    GECZ01001916    GECZ01001115    JAS38255.1    JAS49482.1    JAS50624.1    JAS51482.1    JAS56506.1    JAS65579.1    JAS66016.1    JAS67853.1    JAS68654.1    AJWK01033867    AJWK01033868    AJWK01033869    AJWK01033870    CVRI01000059    CRL03017.1    DS235880    EEB19978.1    EZ424050    ADD20326.1    GDHC01008876    JAQ09753.1    GBHO01007923    GBRD01007644    GBRD01007355    GDHC01020898    JAG35681.1    JAG58177.1    JAP97730.1    GFDG01004303    JAV14496.1    GFDG01003984    JAV14815.1    JRES01000752    KNC28756.1    GFDG01003683    JAV15116.1    GAMC01019769    JAB86786.1    GECL01000758    JAP05366.1    GDKW01002267    JAI54328.1    GFDG01002286    JAV16513.1    AJVK01010812    CCAG010012544    CCAG010012545    CCAG010012546    CCAG010012547    CCAG010012548    CCAG010012549    CCAG010012550    CCAG010012551    CCAG010012552    CCAG010012553    CM000160    EDW99236.1    KRK04739.1    KRK04740.1    CM000070    EAL27401.2    EIM52472.1    EIM52473.1    OUUW01000005    SPP80514.1    KA647280    AFP61909.1    CP012526    ALC45574.1    CH480846    EDW50962.1    AE014297    AY058720    AAL13949.1    CH933806    EDW14320.2    GBBI01004471    JAC14241.1    CH954182    EDV52940.1    CH902623    EDV30380.1    KPU72819.1    GAKP01019475    JAC39477.1    CH964232    EDW80795.2    CH940650    EDW67411.1    KRF83283.1    ADTU01018882   
Pfam
PF00134   Cyclin_N        + More
PF00096   zf-C2H2
PF00432   Prenyltrans
Interpro
IPR028895   CCNG2        + More
IPR039361   Cyclin       
IPR006671   Cyclin_N       
IPR013763   Cyclin-like       
IPR036915   Cyclin-like_sf       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR001330   PFTB_repeat       
IPR026872   FTB       
IPR008930   Terpenoid_cyclase/PrenylTrfase       
SUPFAM
SSF47954   SSF47954        + More
SSF57667   SSF57667       
SSF48239   SSF48239       

Ontologies

Topology

Subcellular location
Chromosome   Localizes mainly on active chromatin.   With evidence from 9 publications.
Length:
361
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.3975
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03157
outside
1  -  361
 
 

Population Genetic Test Statistics

Pi
211.232536
Theta
165.739532
Tajima's D
1.083089
CLR
0.512912
CSRT
0.684165791710414
Interpretation
Uncertain
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