SGID The Silkworm Genome Information Database
Gene
KWMTBOMO06207
Pre Gene Modal
BGIBMGA001654
Annotation
PREDICTED:_uncharacterized_protein_LOC106712628_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 4.919
 

Sequence

CDS
ATGTCGACATTACAAGGTACTCAAGAGTCATGGGCGATTACAGGCGAGAGACTTGATTCAAAATACGAAAAATGCCTGAATATAACTCAAGAAATATACAAAAGAATAAACATCACCTTTCAGATCAAGAAATTAGAGGCACAGAGTGATTTATCAAATTATAGTGATCAAATAGACAGCAATGAGTTAAGTAACGGTACAGATCTGTTTGCTTGCGATAAGACCAGCATATCAAGCAGTACAGATGCGGAGAGACCACAGGCATCATGCGAGAAATACATCAATATCAATAATAATGAGGAGACTAACAAGAAACCTATTATTGCTCAGCGTAGACCGCGTAAGAGATTTAGGAAGCGAGTAAAGAAGCGTCAGTCAAGACCTCATCACATCGATACAGATGGCTCCAGTGATGAAGCGCCTTTGAGTCGCATCGTTGAGACAGACATGAGCATAAAAGCTAATCAAGTCGACTCCCCGCATAATGTTATGGGTGTGCCCAACATAGTCATTGTAGCCAGCTTAAAACCAAAACTGTATACACCGGAAAAGAAACACAACAAAAGGGAAACCACAGATAATGCTCAATGTACAGATAGTAAAACGTCCACCATAGACACGAAGGCTGAGGATCATAGAGAAGTGAACATCAAAAATGAAAATATAATGGAAATGAAAAATTGTTCTCTATGCGGTCTGTTATTTAGAGGCGAAAGAGGTCTAAGGCGGCACATGTCAATGTCTCATATATTGACCCCCAGTCAAGAGATTCGAAGGACCCGTTAA
Protein
MSTLQGTQESWAITGERLDSKYEKCLNITQEIYKRINITFQIKKLEAQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQASCEKYININNNEETNKKPIIAQRRPRKRFRKRVKKRQSRPHHIDTDGSSDEAPLSRIVETDMSIKANQVDSPHNVMGVPNIVIVASLKPKLYTPEKKHNKRETTDNAQCTDSKTSTIDTKAEDHREVNIKNENIMEMKNCSLCGLLFRGERGLRRHMSMSHILTPSQEIRRTR

Summary

Pfam
PF09237   GAGA
Interpro
IPR013087   Znf_C2H2_type        + More
IPR015318   Znf_GAGA-bd_fac       

Ontologies

Topology

Length:
261
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00347
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07513
outside
1  -  261
 
 

Population Genetic Test Statistics

Pi
185.362465
Theta
153.813522
Tajima's D
1.131754
CLR
0.097157
CSRT
0.698265086745663
Interpretation
Uncertain
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