Silkworm Genome Informatics Database

Gene

KWMTBOMO06203

Pre Gene Modal

BGIBMGA001784

Annotation

PREDICTED:_gastrula_zinc_finger_protein_xFG20-1-like_[Bombyx_mori]

Location

Bomo_Chr11(+):2335611-2353935 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.633

CDS

ATGAATGTAAAAAACGATTCTAAGTCTTTGAATGAACTTTGCGTGGTGTGCCTCTGTGTGGGGCGGTCTCTCCGAGTTATCACCGAAGACAAGATCCTGAAATACTACTTGGACGCTTTGCAAGAGATACCTTTAAATAGGGTATCATCAGTTCTGCTAGTGTGCTGGGAGTGTGAGGTGCTGCTGAAGAGGGCTGTACAGTTCAGACAGCAGGTCCAGGATTCCCACAGGATACTGCAAACCTACACTAAAGAGAATTTAAACGAATATTTGCTGACCGAAGTATCAAGGCCGCCGCGTTTGAAGATCACCAAGAACGAGATCATCGCGATATCGCCGCACGTGGATTGTTCTAGAAGACCAAATGTTCGGGTAGATTTTAAGGATGAAGTCAAAAACGAAGTGATCCAAAATTTCATCGGTTATGTTGAACGCGAACAAGAAGATGCCTTGGTAAACGTCAGGAGTGTGTCGAAGAGGAAATCCAAACAATGGACTCGAAAGAAATTGAAGAGAAACAGAGAGAAATTCTCCGAGTGCTTCCTTAATGAAGTGTCATATGCAACCAGCGGCACTCGCAATCGGAAGGACCTGCAGAGCGTGCTTGTAAAAGATGAAGTTAAAAATGAAAAATCTGGCAGCGATATTCGAATGTCTGACGAGTGTGTAATAGACGCGGACTTCTCTGATGACTCTACAGAAGAAATAGGATTGAAAGATAACAAAAATTGTGATAAATTTAGTGGATCTGAGGGATATATTGAAACCACCTTCGAGGATGACAAATTCTCCGAGTGCTTCCTCAATGAAGTGTCATATGCAACCAGCAGCACTCGCAATCGGAAGGACCTGCAGAGCGTGTTCGTAAAGGATGAAGTTAAAAATGAAAATTCTGACAGCGATATTCAAATGTCGGACGATTGTGTAATGGACCCGGACTTCTCTGATGACTCTGGAGAAGAAATGGGATTGAAAGAAAAGAAAAATAGCGATAAATTTAGTGGATCTAAGGGAGATATTGAAACCGCCTTCAAGAATAACAAAATTCAGAACATGAGCGATACGGGGGGCATACCATTGAATGTGAATATTGAAGACAATGCAACATTGGATTTGCAGTTTGATTGTCTGAAAGTGGAGATTGACAATGGGCGGTCGCGCGATGAGGCCGGGAGCGGGATTGATCCGGGGACTGCGATGCACGATCACCCATCGGCCAAAGTCCCGGGCACGTTGAAGAGGAAGACCAAACGTTGCCCGGCGAAGAAGACGAAGAAAGCGAAAGGCGTCAAAGGAAACGGTGTAAACAAAAAGGTGAAAGGATCAGAAGAGAAGCTTTATACTACGATCGAGCTTACGCACGAGCAGATGCTCGACGAGAGGAACGCCGCTCACGGCTCCGAGAGCTTCCAAAGTTCGGCCTACAAATGCGAAACTTGCATTCTCGGCTTTCAGTACCGGCGGCCTTACGAAGCTCATCTAAACTCTAGACACGCAAAGACCCTCGGCGATTACGTATGTCCTATATGCAAGACGGTGGTGATGTCCGTGGACTCTTTCACGGCGCATTACAGACGTCACATGAGAAGGTTCCAGTGCAACTTGTGCGAGAAGAGAACCATAGACAGGGGCCGTATCAAGCAGCATCTGTATACGGAACACGGGGTCGTGATGTCGACGATCAAGTGTAAGCAGTGCGGGCACGTTTCCCGCTCCTTAGACAACCACATACACCACTTGGACACGCACAAGGGAAGGTTCAAATGCAAAGAGTGCACCAAAACCTTCAAACACAGAGGGGGACTGAAGAATCATGCGATCTTGAAGCACGTGACACACGATCAACGGAAATACGTGTGCGATCATTGCAACCGAAGATTCATAGACAAGACGAAACTCCGAGATCACATTGAATGTAAGCACATGCATAAGACGTACCAGTGCCACATATGTTTGAAGCCATCTAAGAACAGAGTGAATCTAGATCAGCACATAAGGAACGTGCACAAAGGGCGACCGAATAATAAAATATGCCATCATTGTGGCAAAGGATTTCCGACCAAAGTCCAGCTCGACTCGCACATGCGTACGCACACGGGAGAGCGTCCCTTCATATGCGAGTATTGCCCGACCACGTTCACACAGAAATCGAATCTATACAAGCATTACAAACAGGTACACCTCAATATAAAATCGAAGAGGTATCCGCCGGTCAAGAAACCGAAAGACGCGCTAAACTGCCAACCGTCCATCGGGGGGTTCGAGAGAATCAATGGCACGACGTACCCGCCCGAAAGAGGTCTCGTGCCGTGCTGA

Protein

MNVKNDSKSLNELCVVCLCVGRSLRVITEDKILKYYLDALQEIPLNRVSSVLLVCWECEVLLKRAVQFRQQVQDSHRILQTYTKENLNEYLLTEVSRPPRLKITKNEIIAISPHVDCSRRPNVRVDFKDEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIQMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNNKIQNMSDTGGIPLNVNIEDNATLDLQFDCLKVEIDNGRSRDEAGSGIDPGTAMHDHPSAKVPGTLKRKTKRCPAKKTKKAKGVKGNGVNKKVKGSEEKLYTTIELTHEQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHAKTLGDYVCPICKTVVMSVDSFTAHYRRHMRRFQCNLCEKRTIDRGRIKQHLYTEHGVVMSTIKCKQCGHVSRSLDNHIHHLDTHKGRFKCKECTKTFKHRGGLKNHAILKHVTHDQRKYVCDHCNRRFIDKTKLRDHIECKHMHKTYQCHICLKPSKNRVNLDQHIRNVHKGRPNNKICHHCGKGFPTKVQLDSHMRTHTGERPFICEYCPTTFTQKSNLYKHYKQVHLNIKSKRYPPVKKPKDALNCQPSIGGFERINGTTYPPERGLVPC

Uniprot

NA

ProteinModelPortal

NA

PDB

5V3G E-value=3.80481e-17, Score=219

KEGG

101743060 no KO assigned | (RefSeq) uncharacterized LOC101743060

GO

GO:0046872 GO:0003676 GO:0005634 GO:0008270 GO:0022857 GO:0004559 GO:0006013 GO:0015923 GO:0006260

Length:

771

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03153

Exp number, first 60 AAs:

0.0295

Total prob of N-in:

0.00178

outside

1 - 771

Pi

189.528235

Theta

149.681986

Tajima's D

0.881546

CLR

0.613902

CSRT

0.633968301584921

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics