SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06188
Pre Gene Modal
BGIBMGA001776
Annotation
PREDICTED:_uncharacterized_protein_LOC100899471?_partial_[Metaseiulus_occidentalis]
Location
Bomo_Chr11(+):2031911-2051251      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.265
 

Sequence

CDS
ATGAAAAAGATCAATCTGTTCTTCAGGCAAGTGGAACAGAGCTATTCCACGCTCAAGGCACAGATTCCATATAATAATGCAAACATAACCACAAATCTCATACGAAGTAATATTGAAGTAATATCAAACTTAAATGATGTCAAAGAAATCAAAATTGAACCTTTAACTCCACAATTTCAAGATGACATTGAAATTGAAGTTAAGCTTGAAGAAGCACCCAATATTAGTAAGTCAACAGTACGGAGTCTTCCAGAACCTCTACAGATTCCACATAACAATGTTAACATGTCTACAATATTGAATAACTATAATTTTAAAGTAATATCGACCTCAAATGATGTAAAAGAAATCAAAATTGAACCTATCACTGCTCGATATGAAGATGATGAAGATGAAAATGATATTGAAGTTAAGTTGGAAGAAAAACACAATATTAGTAAGGCAACAGTACAGAGTCTTCAGGAACCTTTACAGTTGAACATACAAAACCTATTTGTGTGTGTCAAATGCCACAGTTTCATGAAAAAGATCAATCTGTTCTTGAGGCAAGTGGAACAGAGCTACTCCACGCTCAAGGCAGAGATTCCATATAATAATGCAAACATAACTACAAATCTCATACGAAGTAATATTGAAGTAATATCAAACTTAAATGATGTCAAAGAAATCAAAATTGAACCTTTCACTCCACAATTTGAAGATGACATTGAAATTGAAGTTAAGCTTGAAGAAGCACCCAATATTAGTAAATCAACAGTACGGAGTCTTCCAGAACCTCTACAGACTCCACATAACAATGTTAACGTATCTACAATATTGAATAACTATAATTTTAAAGTAATATCGAGCTCAAATGATGTAAAAGAAATCAAAATTGAACCTATCACTCCTCGATATGAAGATGATGAAGATGAAAATGAAATTGAAGTTAAGTTTGAAGAAGAACACAATATTAGTAAGGCAATGGTACGGAGGCTTCAAGAACCTTTACAGGCTGATCATCCTGAAGAATTAAAAACATGTGACGGCATTGAGGACTGCTTTGGAGCCAGACTGAAGACAACAGACCTGTCGCGGACCGAACTTGAAGCCGAGAGAGAACTAGCAAAAACGCACAGCAAATACACAGCGAAGCTGTACAAATGTGAAAAATGTTTAGTTTCCTACGATAATGAGTTGCATTTGAGAAAGCATTTGCTTTTGAGGCATAATGAGAAAAATCTTTACAAGTGTGACGTCTGTTATTGTACATACGACACGGAACTCAAATTGGAGACGCACGCCAGGAGGCATTACCTTAGAACTGCTTACAATCACACCATAGCAGACCGATCTGACGAACCTATGGACTACACGGATCCGCCGCTACCTTCAAAGAGTAATATACTCAAGGAAGCGCAAGACGCTGTCGCATTCACGTCATTCGACGAGCCATCAACCATAGCTGCTCCAAAATCGAAGGCACAGAAGCAACGCGAGTACAGACAGCGCATAGCAGCATCCAGAACATCTGCACAGGCGATAGCCGCTAAGAAGTCGGATGCCGAAAGACAACGTAACCGGAGATTACGCAAAGCCGCCAAATTGGCCCTTATCAGTGGGTCATTAGAATCGAATACTGCACCCATTTCTCGTTCAGGGGCGAAATCAAATGACCTTCAAACTGGTACTAAACCAGAGCCCACACACAAGCATAGTCGTACTTCAGCATCAGAACCAGGTCCAATCACTTCTGATCAAATTGTGATAGAACAGACACAATCTACTTGGAAGACTAAATGGGCATTCTCGATCGTGAGGTTCAAATCAACTTTCCTGGACAACGATTTCGGTCACGCTTGTTCGATTTGCGACAGGCTTTGGTTCAAAAACGACCTGAAACCCATCACCGAGCCACAGCTGGAGGTGATCTCGGAATGGTTCGTCAAAGAAAATCGAAGACCGCGCCGAGAAGAATATGAAATGGTTTGCAATACTTGTAAACGTTCACTGAACAAAAAATCGATGCCGCCCCTAGCAAAAGTCAATGGATTCTCATATCCAGACGAACCGCCAGCTCTGCCACCCTTGGATCCCATCAGCGAACGACTGATATCGCCGCTCCTGCCATTTATGCAAGTTCGTCGTCTGCGCCACGATGCCTCTTATGGAATCGTAGGGCAAGTGATCAACTTACCAGCAGACGTACAGCAGATGGTGAAATGTTTGCCGCGCCAATTAAACGAAGACCATGTCATCAATGTAAACATCGAGCGAAACCTTGCCCACAAATCGGCCTACATCAGCGGATATATGTCAAAAAGCACAATCAGCTCATGGCTAACTGCACTGCAGGAGTCGACGTTATATCGTTTATATGAAATCAACGTGGATTTATCTAGGCTGCATCCTACTGTGCCGTCTCTCGATGACATAAAGGATGATCCTTCGAACCGTATAGAAAACATTTCCGTTGAAAACGCACCTGAATCTGAGATATTCGCTTCAAGACAACATACCGTGATTTGGAATGAGGAAGATTGTCCGAAAATCGCACCGGGACATCAGGCGACACCACTCAACGTCATTTATGACCGTCACATTGAAGAGTTATCGTTTCCATCGATCTACTTCGGAGAGCCTCGTAGTTTTCACGTGGGAGTTCCAGTAACACCTTACATGGTGGCGACCAGTGAGATACGTCGTCGCGACCGACGCGGAGCAACTCCTCAAAAAATCCTGTATGTTGCAATGAAAATATTGCGGCAGCGAATGATGGACGGGATTCACAGCACGTTCCGCAACGTTTCGGTCACTGAGAACATTACGCGAGGCATGTTAGAGGACACAGAATTCATGAAAGAATATGTCATGCAAAACCTCGCATTCATGAAGACAGTGCCAAACTCAGTCCAGTACTGGGCCTCTCGCAAACGAGACCTCCTCGCGATGATCCGTCAGCTTGGCAAACCAACCGCCTTACTCACTATAAGCGCCAACGAAATACGCTGGACGAAACTGCTCACTATACTCCTCAAACTGAGCAAGAAATATCCTGGGAAAACGGCAAATGATCTCGACACTTCTGAGCGTTGTGCTTTAGTGAGCGACGATCCTGTTACGTGCTGCATATACTTCTACAAGCTAGTTAGTTCGTTGATGAAAATGCTGAAATCCAAACAGTCTTACAATCCGTTCGGAAAATATTTCGTTAAAGATCACTTCCTACGTATCGAGTTCCAGGAGCGAGGACGTCCACGCGCACGTATATTGTTGTGGTTGAACGACGACCCGCGCGAGACCGTATCGGAAAGTATGCCAAGAACAGTCGATCTCGTGGAAAAACTAAGTTCAGTTGCTCGGGATGATGTGCCAAACGATTCTATATACGCCAATCAGATACACAAGCATAGTTTCACTTGCACAAAGCGTGGCGAGACAGCTTGCAGATTCGGGGTCCCGTACTGGCCTATGCCCACGACCCGTGTACTGGTTCCGATGCCTCAAGCTGATGGACGTGGCCAAAACCTAGAAGAGAAGGCCAAGGAGCTGCGTGCCTCTCTCGGTGAACGTCGATACGCATCTATGGATGAGTTTCTTAATGCTAACGGCTTGACTTACATTACGTATCTCGACATTGTGCGCTCAACGTTGCGCCGACCGACTATAGTGTTCAGGCGAAACTTCGACGAACTAATGACAGACACGTTCAATCCGTACCTTGCCGGCGAAGTCAACTCTAAAATCGACATTCAGTTCATCTTGGACGAGCACAGCTGCGCAGATTACGTCGTGGAGTATATAAATAGATCAGCCCGTGGAATGGGTGATCTGCGTCGTGAGCTCACCACGATGATGCAAGAGCATCCAGAACAGGACTACACGGGTCAATTGAAAGCGTTAAGTGTTAAAATGCTTAACGCAGTCGAGACGTCGGCGCAAGAAGCAGCATGGTATCTGCTGCGACAACGCATGAGCGAGGCTAGTCGTCAAATCGTGTACATCCCAACCGTGTGGCCGGCTGAAAGGCCGTGCTGCCGCAAGCGTCGTCAGCAAATGGACCGCGAGGGCATCGACGGAGACAGCACCGATGTGTGGACCAAAAACATAATACAGCGATACGAAGAACGACCTGAATCATTAGAACAAGTGTATTTGGCTGAGTTCGCTTCGTGGTATGCTAACGCTAGCGATTTCCTTGACGAAGAAGACGACGTGCACGTGGATGACGATGAGGATTCTGAAGCTATACCTGAAACGAGAACGTCAAGAGCATCTAAAGAATATCGCAGACGACCGCTCGGACGAATCATACGGTACAGACGCTATGATATCGATGACACTGACAATTATAAACGGGAGATGGTTCTACTTTACGTGCGGTTTCGCAACGAAATGTCAGAGATTGTTGATCAAAATAAGTTTTTGCAATTATTCGACGAAAATGAAGATACCATTATGGAACGCCATAGACTATTCGAGACGAATATAAACATTGAAAACGTCGTAAAAGAACTCGAAGTGATGACGATTTTGGAAAACGATAATAACGGCAATCAAGCAAGAAGAGGAATCAAGAGCAGCGTTTGTCCAACGGTTGTTGGGAAAAGATGGTGCCAAGAACAGCGATGA
Protein
MKKINLFFRQVEQSYSTLKAQIPYNNANITTNLIRSNIEVISNLNDVKEIKIEPLTPQFQDDIEIEVKLEEAPNISKSTVRSLPEPLQIPHNNVNMSTILNNYNFKVISTSNDVKEIKIEPITARYEDDEDENDIEVKLEEKHNISKATVQSLQEPLQLNIQNLFVCVKCHSFMKKINLFLRQVEQSYSTLKAEIPYNNANITTNLIRSNIEVISNLNDVKEIKIEPFTPQFEDDIEIEVKLEEAPNISKSTVRSLPEPLQTPHNNVNVSTILNNYNFKVISSSNDVKEIKIEPITPRYEDDEDENEIEVKFEEEHNISKAMVRRLQEPLQADHPEELKTCDGIEDCFGARLKTTDLSRTELEAERELAKTHSKYTAKLYKCEKCLVSYDNELHLRKHLLLRHNEKNLYKCDVCYCTYDTELKLETHARRHYLRTAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAAPKSKAQKQREYRQRIAASRTSAQAIAAKKSDAERQRNRRLRKAAKLALISGSLESNTAPISRSGAKSNDLQTGTKPEPTHKHSRTSASEPGPITSDQIVIEQTQSTWKTKWAFSIVRFKSTFLDNDFGHACSICDRLWFKNDLKPITEPQLEVISEWFVKENRRPRREEYEMVCNTCKRSLNKKSMPPLAKVNGFSYPDEPPALPPLDPISERLISPLLPFMQVRRLRHDASYGIVGQVINLPADVQQMVKCLPRQLNEDHVINVNIERNLAHKSAYISGYMSKSTISSWLTALQESTLYRLYEINVDLSRLHPTVPSLDDIKDDPSNRIENISVENAPESEIFASRQHTVIWNEEDCPKIAPGHQATPLNVIYDRHIEELSFPSIYFGEPRSFHVGVPVTPYMVATSEIRRRDRRGATPQKILYVAMKILRQRMMDGIHSTFRNVSVTENITRGMLEDTEFMKEYVMQNLAFMKTVPNSVQYWASRKRDLLAMIRQLGKPTALLTISANEIRWTKLLTILLKLSKKYPGKTANDLDTSERCALVSDDPVTCCIYFYKLVSSLMKMLKSKQSYNPFGKYFVKDHFLRIEFQERGRPRARILLWLNDDPRETVSESMPRTVDLVEKLSSVARDDVPNDSIYANQIHKHSFTCTKRGETACRFGVPYWPMPTTRVLVPMPQADGRGQNLEEKAKELRASLGERRYASMDEFLNANGLTYITYLDIVRSTLRRPTIVFRRNFDELMTDTFNPYLAGEVNSKIDIQFILDEHSCADYVVEYINRSARGMGDLRRELTTMMQEHPEQDYTGQLKALSVKMLNAVETSAQEAAWYLLRQRMSEASRQIVYIPTVWPAERPCCRKRRQQMDREGIDGDSTDVWTKNIIQRYEERPESLEQVYLAEFASWYANASDFLDEEDDVHVDDDEDSEAIPETRTSRASKEYRRRPLGRIIRYRRYDIDDTDNYKREMVLLYVRFRNEMSEIVDQNKFLQLFDENEDTIMERHRLFETNINIENVVKELEVMTILENDNNGNQARRGIKSSVCPTVVGKRWCQEQR

Summary

Uniprot
H9IWZ3  
Pubmed
19121390   
EMBL
BABH01021151    BABH01021152   
Proteomes
UP000005204   
PRIDE
H9IWZ3   
Pfam
PF14214   Helitron_like_N
Interpro
IPR025476   Helitron_helicase-like        + More
IPR013087   Znf_C2H2_type       
ProteinModelPortal
H9IWZ3  

Ontologies

KEGG
101737282    no KO assigned | (RefSeq) zinc finger protein 225-like
GO
GO:0003676   GO:0046872   GO:0008270   GO:0022857   GO:0004559   GO:0006013   GO:0015923   GO:0005634   GO:0006260  

Topology

Length:
1536
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00101
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1536
 
 

Population Genetic Test Statistics

Pi
378.620941
Theta
203.870535
Tajima's D
3.45101
CLR
0.52546
CSRT
0.993050347482626
Interpretation
Uncertain
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