Gene

KWMTBOMO06187

Pre Gene Modal

BGIBMGA001663

Annotation

PREDICTED:_zinc_finger_protein_2-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr11(-):2019942-2027460      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.733

CDS

ATGGAATTTGAAGTAAAAAGTGAAATAAACAATGAGGTTCTTCTATGCCGCACTTGTTTGAATGGGGAACAGAAGTTGAAACCATTAGGGCAATTATCTGCTATTTTTCGAAAATTATTTTCGGATTGCAAAGGCTTATTCGACTTGGAAATGATTGAAATATGTTTGGAATGCGAAGCCATGCTGAAAAGGATTGACGATTTTTACAATCGTGTGCAAAGAGCTATCGGACTATTGTTGAGTGGAACGAAATTCAAGAGTAGCTCTCTCTCGTTCCCGGAAACAACGAAGCAATGCGTGCAAACAGAATGTGTAGAGTTAAAAAGAGAATTTAACAAAGAAGCTTCTGTAGTTTTAGATGCGGAAGAAATTGAAAATAAAAAGCAGAGAATGAAAAAGCAAAGTAACTGGGCGAGAAGACGAGCCTTATTAAACAAAAAGCCCAAATATGTAATAATAAAATTACAAGAGAACACAATGTTTAAGAAGAAGAGATTCAACAACGTTGACGAATTGAATTCATTTCTGAATACCCACAGATGCAGTGATCTTTTTAAAGGGAAAGAGTTCAAATGTGAATCTTGCGTGTACTTTTTCAAAAATAATAGGTTACTGGAGAGTCATAACAAGAGATATCACAATAAGAGATTGTCATACATCTGTGATATCTGCGAGTCGAATTTTCCCGACAAGCTTCGCCTGAAGATGCACATCGCCAGCCATTTTGACGTTTACGAATGTCAGTATTGCCGACAGATATGTCAGGGTGACAGCTCGAAAGGTAGACACGTCAGAGAGCACGGCGCAGTGTTGCAGTGTTTGAAATGCGACGCTAAATTTAGCGAGCGTCGTGACTTCTACGCGCACCACAGACGGCTCCACGAGATTTTCGTCTGTCATCACTGCGGAGTGTCCTTCAAAATGAGAAGGAGACACGCCCCGAAGAAGTGCACGTGCTGCAATAAGACGTTCGCCCGTTACAAGTCGCTGTGGATGCACACGAGGTTGTCGCACGCATCCGCCGTGCCCGCTTACTGCGTGGAGTGCGACAAGCACTTCACCGACGTGTACAAATACAGAAGACACTTGAACGGCCCGAAACATAAGCCGGGGAAGAAGCGGAGGATCCCATGTCCGAATTGCGGCAAGGTCTTCAGTAAAAACATATACATGAAGAACCATTACGATTTGGTTCATTTGAAGAAGATTCACAACAGATGTGAAGAGTGCGACAAGAACTACTTAAGGAAGGCGGATCTGTTGAAGCACAAGCTGAGGATCCACGAAGGGGTCTCGCCGCCTCGGAATAAGATCTGCGGCGTCTGCAGTAGGGGATTCACGACGAACAGAATACTCGCGAATCATGTCCGCACGCACACAGGCGAACGTCCGTATTCGTGTGCGATCTGCGCCGCCACGTTCACGCAGAACTCTGCGCTGTCAACTCACGTTCGATCGAAGCATAGAGACGTGTGA

Protein

MEFEVKSEINNEVLLCRTCLNGEQKLKPLGQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRAIGLLLSGTKFKSSSLSFPETTKQCVQTECVELKREFNKEASVVLDAEEIENKKQRMKKQSNWARRRALLNKKPKYVIIKLQENTMFKKKRFNNVDELNSFLNTHRCSDLFKGKEFKCESCVYFFKNNRLLESHNKRYHNKRLSYICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRRRHAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKHKPGKKRRIPCPNCGKVFSKNIYMKNHYDLVHLKKIHNRCEECDKNYLRKADLLKHKLRIHEGVSPPRNKICGVCSRGFTTNRILANHVRTHTGERPYSCAICAATFTQNSALSTHVRSKHRDV

Uniprot

A0A2A4JMU5   A0A3S2THA9   A0A2H1W4L2   H9IWZ4   A0A3S2NF42   A0A2W1BK83   + More
A0A0N0PBL1   A0A2H1WUB2   A0A1E1WJ28   A0A194QRA1   A0A212F479   A0A146QPP6   A0A146TSP3   A0A3Q2FFQ9   A0A3S2NQN3   A0A3Q2CGL1   A0A3P9PM12   J9JMS6   A0A087XPE8   H9G5S8   A0A0N0PE54   W4X9H3   A0A3P9HTS6   A0A3B5LPH5  

EC Number

2.1.1.-

Pubmed

19121390    28756777    26354079    22118469    21881562    17554307    + More

EMBL

NWSH01000953    PCG73395.1    RSAL01000142    RVE46037.1    ODYU01006296    SOQ48021.1    + More
BABH01021154    RSAL01000063    RVE49477.1    KZ149995    PZC75449.1    KQ460969    KPJ10206.1    ODYU01010720    SOQ56004.1    GDQN01004034    JAT87020.1    KQ461198    KPJ06061.1    AGBW02010415    OWR48546.1    GCES01128495    JAQ57827.1    GCES01090321    JAQ96001.1    RVE46029.1    ABLF02038601    AYCK01023940    AYCK01023941    AYCK01023942    AYCK01023943    AAWZ02032794    AAWZ02032795    AAWZ02032796    AAWZ02032797    KQ459983    KPJ19122.1    AAGJ04106031    AAGJ04106032    AAGJ04106033   

Proteomes

UP000218220    UP000283053    UP000005204    UP000053240    UP000007151    UP000265020    + More
UP000242638    UP000007819    UP000028760    UP000001646    UP000007110    UP000265200    UP000261380   

PRIDE

H9IWZ4   

Pfam

PF00096   zf-C2H2

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
IPR003656   Znf_BED       
IPR017125   Znf_PRDM5-like       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A2A4JMU5   A0A3S2THA9   A0A2H1W4L2   H9IWZ4   A0A3S2NF42   A0A2W1BK83   + More
A0A0N0PBL1   A0A2H1WUB2   A0A1E1WJ28   A0A194QRA1   A0A212F479   A0A146QPP6   A0A146TSP3   A0A3Q2FFQ9   A0A3S2NQN3   A0A3Q2CGL1   A0A3P9PM12   J9JMS6   A0A087XPE8   H9G5S8   A0A0N0PE54   W4X9H3   A0A3P9HTS6   A0A3B5LPH5  

PDB

5V3M     E-value=4.84334e-17,     Score=216

KEGG

101741194    no KO assigned | (RefSeq) zinc finger protein 28-like

GO

GO:0003676   GO:0005634   GO:0008270   GO:0046872   GO:0000976   GO:0003677   GO:0022857   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

Length:

491

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00155

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00225

outside

1  -  491

 

 

Pi

374.613474

Theta

191.506347

Tajima's D

2.79899

CLR

0.134335

CSRT

0.966751662416879

Interpretation

Uncertain