SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06180
Pre Gene Modal
BGIBMGA001666
Annotation
PREDICTED:_bromodomain-containing_protein_8-like_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.913 Nuclear   Reliability : 1.244
 

Sequence

CDS
ATGAGCTCGATACAAGAGCGTCTTCAGCTCAAAAGAGTTCCTCTGGACACTTGGAATATACGTGAACAGCTATGCCTGGCCTCCGCCGTGGTCAGAAGCGGGGATCAGAACTGGATGTCGGTTTCCCGCGCTCTAAAGACCCTTGGCGAGCCAAACAGGCCTCCGGACTGGTATTCCCAAAAAAGCTGTGCTGCACAATATGGAACGCTATTAGAACATGTGGAAACGCCGAAACGAAAAAAGAGAAACTCTGACGGTGGCGTGGAAACTCCACAGGAGAGTATATTGAAACGTTTAACCCAAGATCGGATAGCCGAGATCCAGAAGAATATTGCTGAAATGAGTCAACAACATGAAGTAATGAAGGATGAATTATCGGAGATCCGTAATCCTTCAACGTCTGATGAGCGTCTGCTTGAGCTCTGGGCCAACATGGAGTCCGCGAAACGGGCTAAAGAAAGAGAAGCAGCGAAGAAGGTAGCTTGGCTCAAAGAAAGAGAGGAAAGGCGGGTCAGAGCCGAGAGGAACTGGCGTCCACAATCGACTCCGTCTTCACCAGCACACGACAACACACCGACTCCAGTGCCCCCAGCCTCCCCGCTCCTGACGTCACTGCTGAAGTCGTCTCCGGTTGTAACAACACCACAGCACATCTCGCATCCAGCCAATCTTGTCGAAACGGTCTCGCCATCAGTCACGGCTCCTACTCTGTCGATGCTGCTGGAGAAGTCCTTGTCCTCGTCCTCCTGCAACCAGCACGAGAGCAAGCACGCGGCCATCGAGCACATCAAGAGTCAGCTGCAACAGATCGAGCACCAGCTGAAGGCGAACACGAGCGCGCCGGTGTTGCCAGCCCCCGCCCCCGCCCCCACCCTCGCCCCCGCAGTGGACATCGACGACATCGAGATCAAGGCTGAAGACGTTTACGCCTTCAGGGACGTGGACATACACATACCGCCCGTCGCCTTGCAAAAAGGCGGCGCGGGGGGCAGCAAACAAGAAAAACCAGCTCCCAAAAAGGATGAAGAGGCTGTCGAAGCTGACGGGGCCGCGGAGGATTCCTCTGAACCAATGGAGGAGAGTATCAAGGAGGAACCGACGTCCGTGGAGGCTAGCGAAGAGGCTGTGATAGAAGATACGGAGGTGGCTGACGCGACGTTGCCGCCGCAGGAACCGCCGGAAGAGGCTCCGGAAGCGGAGGGGGCCGCCCCCCCGCCCGACCCCCCAGCAGAGACGGAGGTCAAGGTCAGCTTCCCGGAAGTGAAATTCCCGACGACCGAAATAAAAGTCATTCAACCCGAAGTTGAAAAGATAAAAGAGGAGATCAAGGAAATAGAATCGACACCCCCTCAACCGGACGTGGAGGAAGAGGAGGTGGTCACGCCGAAAGATGAACCAGCCCCTCCGGTCGAGGAGGAGCCTCTACCCGCGGAAGAGAGTGACGCACTTGACCCCGAACCACCTCCGGTCCCTGTAGAAGAGAAACCAGAGCCGTCCGCGAGCGAAACGGAAGTTGTAACCCCTGAAGCACTTCCTCAAGATGAGTCGGTTGAAGAACCGCCTCCCGCGCAACAGCCGGAGGACGTCGAGGAGGAGTGTCTGAGGGTGCTGCCCGAAGATATACCCTTGCCACCGGAGCCGGAACCGGATGCGAAGGAGCCCGACGCACCAGAAGCGGCTGAGAACCCAGCGCCACCAGAGGAGACTCCGGTCGAGGAGCCACCGCCCGAAGCGAAGCCGGAAGCCGAAGAGGAAACACCACTGGTGGAAGTCAAGACGGAGCCGGAAGTGGCGAACGAATCGGCCGCACCGGAACCGGAAGCGGCCATCGAGAAGACAGAGGACGGACTGAAGAGAGACGAAGATGCCGAGGATTCAATACCGCTGAACCAGATGCTCATCCAGGCGGTCGCGAAGCGGGAGCCGCCGCCCCCCGAGGAGACGCACGCCGAGACAGACGACGACACCCCCATGGAGCACACGGCTCACCACGGATGGTGA
Protein
MSSIQERLQLKRVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTLGEPNRPPDWYSQKSCAAQYGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLELWANMESAKRAKEREAAKKVAWLKEREERRVRAERNWRPQSTPSSPAHDNTPTPVPPASPLLTSLLKSSPVVTTPQHISHPANLVETVSPSVTAPTLSMLLEKSLSSSSCNQHESKHAAIEHIKSQLQQIEHQLKANTSAPVLPAPAPAPTLAPAVDIDDIEIKAEDVYAFRDVDIHIPPVALQKGGAGGSKQEKPAPKKDEEAVEADGAAEDSSEPMEESIKEEPTSVEASEEAVIEDTEVADATLPPQEPPEEAPEAEGAAPPPDPPAETEVKVSFPEVKFPTTEIKVIQPEVEKIKEEIKEIESTPPQPDVEEEEVVTPKDEPAPPVEEEPLPAEESDALDPEPPPVPVEEKPEPSASETEVVTPEALPQDESVEEPPPAQQPEDVEEECLRVLPEDIPLPPEPEPDAKEPDAPEAAENPAPPEETPVEEPPPEAKPEAEEETPLVEVKTEPEVANESAAPEPEAAIEKTEDGLKRDEDAEDSIPLNQMLIQAVAKREPPPPEETHAETDDDTPMEHTAHHGW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
666
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00019
outside
1  -  666
 
 

Population Genetic Test Statistics

Pi
312.279429
Theta
176.465465
Tajima's D
2.324613
CLR
0.28995
CSRT
0.926653667316634
Interpretation
Uncertain
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