Gene

KWMTBOMO06165

Pre Gene Modal

BGIBMGA009638

Annotation

PREDICTED:_uncharacterized_protein_LOC106131099_[Amyelois_transitella]

Location

Bomo_Chr11(-):1712393-1716810      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.023

CDS

ATGTCTTATTTGGGAAATTTACCAATTTACGATCATAAAACATGTGAATGGTCTATTTTCAAGAGTCGTTTAACACAGTTTTTAAAAGTAAATGACGTATCGGAAGAAAAGAAAAGTGCTATCCTCATTACGCACCTCTCCGATGAGGCGTACCGTCTAGTGCGAAATTTAGCATACCCCAAAGATGCTGATTCATTTTCGTATGTGGAGCTGGTTTCATTACTCGATAATCATTTTAAGCCAAAGAAGTGTTCATATACCGACAAGGCTCGTTTTTATGGGGCTACGAGAACCCCAGGCGAATCATTAGGAGACTGGGCGGCGCGACTTAGGGGGTTGGCAAGTTATTGCGAATTCGGCGCGGCTTTGGAAACGAACCTTACGGATCGTTTTGTCCTAGGCCTGGGCTCAGGTCCAGCACGAGATAAGCTGTACGAGCAGGACCCATCAAAAATGAAAATCGATCGAGCGTTAGAAATAGCCCAGCAGGCAGAGAGTGCGAGGGAGGCTAAGTTCATGGAAGTTAGTGTTAAGGAAGAACCTGTGTACCGTGCCTCCTTCACGCTCGACGATAGACGTGAAGCTAATCGACGAGCGCGGACGAGTGAGCCAAGCAGTGGTTATTCAGGGCAGCGGCAGCGGTCCCACCTTGGTGATGGTCAATCAGTTCGCGGGCAGCAACCACGTCGTGACTTCCCAAGGTGCTCGGTTTGCGGGTTAAGAAACCACGACGAAGAGAAGTGCCGTTACAAGGGCTATCGCTGTCAGAAGTGCGGTGAAAAGGGACATTTAAAAAAAGTGTGTGACAAAAATGTGCAGATCAATAATATTTGTGATGACCACGATAAAGGTGTCGGCCACATTCCGGATCCTGACCATTGTGAGGAATGTCATAATTATAGTTTAAAGTACGTGTCTGATAAGCCGATTAATTTAAAATTATTGCTAGGTGGCAAGAGCATAACAATGGAGTTAGATTCTGGTTCTGGGACATCAGTGATATCAAAATCATTATACGATACATTGTTTTCGAAGTACAAGTTAAATAAATGTAACATCAAAATGTGCCTTTATAACGGACATAAAATTTCACCGGAAGGGTATTTTGATATCGAGGCAAAATTTAATCAACAACAAAAAAACTTAAAATTATTTGTTATTAAAAACGGTGGCCCTCCACTTCTCGGTCGAGATTTTATGTCCGCCTTCGGTGTAACGTTTACCACTGGTCTTCATAACATTTGTTATACCGATAAAGATGTTCAAAGTTTGCTAGAACAATTTCCAGATCTGTGGCGTGACGAATTAGGGTCATTCACAAAATTTCAGGTCGATTTAAAATTAAAAGAGGATGCTGTACCAAAGTTTTTCAAACCTCGAACGGTACCATTCGCGCTCAAAGCTAAGGTAGAAGCCGAGTTGGATAGAAATTTTATTCCCAACGCATCATGTATTATGAGTCCACTTCACGAGTTACTCCGCAACGGCGCGCAGTGGGAATGGACGGAGCGGCAACGTCGCGCGGTGCATCAGGTAAAGACCGAGTTGGCATCGGAGCGCGTCCTTGCCCACTTCGAGCACGACGCTCAGCTGATTCTGACCGTAGATGCGGGCCCAGGCGGCCTCGGCGCGGTGCTGGCCCAGAGGCATATCGATCAGATTCTTAGAAGTAAGGAAGATTTTGAAAAAAAGAGTTGTATTACTAGTACGTCGCCTCCATTTTCCAACACAACAATTTTAGCAAAACCTAACAAAACCAATTATAGCGATGGTTCGATTATGACTTCTGTAGCTCAACAGGCTGTGGGAATGGAAAGTGGAGACGGACGTAACGAGCAAGAAAATGTAGTAACCGATATTGGTGACATTGTCCAGCCAACTGACGAGATCTGGGGTGATTGCGAAGAAGTTGACCTTGAACGGGAGAACCTAGTTCCTGGCAGTTCAGCCGAGCCTCCGGCGCCGCCGCTGGCGTTGTCGTCACCAGTCGCGTCTAAACGTACCTCACCTGTTTCTGATCCACATCAGCCCGGACCCTCGTCCTTAACTTATTCCCCACCGCTCACACGTCGCAAGAAGAGAGTTGATTACAAGCAATTCTATTATTGA

Protein

MSYLGNLPIYDHKTCEWSIFKSRLTQFLKVNDVSEEKKSAILITHLSDEAYRLVRNLAYPKDADSFSYVELVSLLDNHFKPKKCSYTDKARFYGATRTPGESLGDWAARLRGLASYCEFGAALETNLTDRFVLGLGSGPARDKLYEQDPSKMKIDRALEIAQQAESAREAKFMEVSVKEEPVYRASFTLDDRREANRRARTSEPSSGYSGQRQRSHLGDGQSVRGQQPRRDFPRCSVCGLRNHDEEKCRYKGYRCQKCGEKGHLKKVCDKNVQINNICDDHDKGVGHIPDPDHCEECHNYSLKYVSDKPINLKLLLGGKSITMELDSGSGTSVISKSLYDTLFSKYKLNKCNIKMCLYNGHKISPEGYFDIEAKFNQQQKNLKLFVIKNGGPPLLGRDFMSAFGVTFTTGLHNICYTDKDVQSLLEQFPDLWRDELGSFTKFQVDLKLKEDAVPKFFKPRTVPFALKAKVEAELDRNFIPNASCIMSPLHELLRNGAQWEWTERQRRAVHQVKTELASERVLAHFEHDAQLILTVDAGPGGLGAVLAQRHIDQILRSKEDFEKKSCITSTSPPFSNTTILAKPNKTNYSDGSIMTSVAQQAVGMESGDGRNEQENVVTDIGDIVQPTDEIWGDCEEVDLERENLVPGSSAEPPAPPLALSSPVASKRTSPVSDPHQPGPSSLTYSPPLTRRKKRVDYKQFYY

Uniprot

J9KFN3   X1XT86   A0A1Y1KCE7   J9LDN7   X1WTX7   J9KQR5   + More
A0A146M835   V5GQ27   A0A1Y1LPV1   A0A0A9WT47   J9L142   A0A1Y1NDL2   A0A1Y1NGB8   A0A2R7X643   A0A1B6DD07   A0A1B6CPB9   A0A3B3H2N7   A0A3P8QD94   A0A3P8NHI5   A0A3S2PB62   X1WZX1   A0A3Q1EQC9   A0A3S0ZSV8   A0A1B6E6W0   A0A3P8Q506   A0A1B6CK52   A0A1A7YSF0   A0A1X7TIE8   A0A2I4C6V0   A0A0J7KBM1   A0A1B6KDA3   A0A1B6L0V9  

Pubmed

28004739    26823975    25401762    17554307   

EMBL

ABLF02036937    ABLF02012266    ABLF02012271    GEZM01092768    GEZM01092767    JAV56467.1    + More
ABLF02030002    ABLF02008248    ABLF02008249    ABLF02008250    ABLF02035153    ABLF02037855    ABLF02037866    ABLF02061872    ABLF02006499    ABLF02041879    GDHC01002706    JAQ15923.1    GALX01002217    JAB66249.1    GEZM01051399    JAV74971.1    GBHO01031997    JAG11607.1    ABLF02012827    ABLF02012828    ABLF02015552    ABLF02041322    GEZM01005739    JAV95951.1    GEZM01005740    JAV95950.1    KK857512    PTY27246.1    GEDC01013717    JAS23581.1    GEDC01021971    JAS15327.1    RSAL01000130    RVE46453.1    ABLF02013313    RQTK01000185    RUS85038.1    GEDC01007675    GEDC01003661    JAS29623.1    JAS33637.1    GEDC01023506    GEDC01023205    JAS13792.1    JAS14093.1    HADX01010638    SBP32870.1    LBMM01010146    KMQ87646.1    GEBQ01030602    JAT09375.1    GEBQ01022644    GEBQ01012433    JAT17333.1    JAT27544.1   

Proteomes

UP000007819    UP000001038    UP000265100    UP000283053    UP000257200    UP000271974    + More
UP000007879    UP000192220    UP000036403   

Pfam

PF00078   RVT_1        + More
PF00665   rve
PF17921   Integrase_H2C2
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH
PF05485   THAP
PF00098   zf-CCHC
PF00378   ECH_1

Interpro

IPR012337   RNaseH-like_sf        + More
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041373   RT_RNaseH       
IPR036875   Znf_CCHC_sf       
IPR006612   THAP_Znf       
IPR001878   Znf_CCHC       
IPR001995   Peptidase_A2_cat       
IPR001753   Enoyl-CoA_hydra/iso       
IPR029045   ClpP/crotonase-like_dom_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       
SSF52096   SSF52096       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

J9KFN3   X1XT86   A0A1Y1KCE7   J9LDN7   X1WTX7   J9KQR5   + More
A0A146M835   V5GQ27   A0A1Y1LPV1   A0A0A9WT47   J9L142   A0A1Y1NDL2   A0A1Y1NGB8   A0A2R7X643   A0A1B6DD07   A0A1B6CPB9   A0A3B3H2N7   A0A3P8QD94   A0A3P8NHI5   A0A3S2PB62   X1WZX1   A0A3Q1EQC9   A0A3S0ZSV8   A0A1B6E6W0   A0A3P8Q506   A0A1B6CK52   A0A1A7YSF0   A0A1X7TIE8   A0A2I4C6V0   A0A0J7KBM1   A0A1B6KDA3   A0A1B6L0V9  

PDB

4OL8     E-value=9.21836e-08,     Score=137

KEGG

101735635    no KO assigned | (RefSeq) receptor-like protein kinase BRI1-like 3

GO

GO:0003676   GO:0015074   GO:0008270   GO:0003677   GO:0004190   GO:0006508   GO:0007017   GO:0004559   GO:0006013   GO:0015923   GO:0005634   GO:0006260  

Length:

702

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01239

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00008

outside

1  -  702

 

 

Pi

243.139591

Theta

162.682723

Tajima's D

1.395871

CLR

10.814854

CSRT

0.764361781910904

Interpretation

Uncertain