SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06157  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001675
Annotation
PREDICTED:_uncharacterized_protein_LOC101739668_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr11(-):1541784-1585980      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.912
 

Sequence

CDS
ATGTCGAATCACAGTAGGCCTCAGAGGCGCCGGGAGTGGGACCCGATGAGGGACGATTTTAACGAACACACGTATGACGTGCAATACGCCGATGATAATGCCGGGGAACAAGTGCAGCTTGACCACACGAAGCTGTACATAATCAACATACCGAGAGGTCTGAGCGAGGACGGCATTCGCGCCGCCTTCTCGAAGCACGGAAAAGTTTTAAGCGCCCGCTTGAGCAAAAATCCTAACAAGAGATTCGCCATAGTGCAATTCGAGACTGCTAGTGAAGCCAAACTGGCCATGATGAAAATGAACGGCTCCGAACCTCTGAACCTGAAGATATCCATAGCTCATAAGACGATTCGGAAAACGCAACATGATAATAAAGACAGGAATTACAGCACGTCACGAAATGGTCATTGTAGTAGAGATGAAGCATCCAGTATCAGCAGCAAGGGATGGAATATGAGGAATCTGGACGATGTCATGAACAATGATGAAATTGACGAAATTGATGACATGATTCATGAGGATCACGATGACAACCTTGACTTGGAGCTGGACATGCTCACGCTGAAACAGCTGAAGATCAAAGAGGAGCAGCTCATGTGTAAGCGCAGATTGCTCCTGCGACATGCTGAGAAGAGACAGGTGGCTCCGCATTCGTCTGCCGGTAGATCCGTCCTGCCCGACGGTCGGATCGTCGTGAGGAACAACGCCAATGAAACGGATTCTGCTGAGGTGGAACCTTCGTTCGCTGGAGCCGGTTCAGAATCGAGCGAGACCCTATGCTCCTGCCTGACGAAGACATGCGATCGAGCTTCCGTAAGCAGTGCGTCCACGACTGCATGCGATAAATGCGCCGGCGCTGACAAAGCTAAGTCTACGATCCACAATAAAACCGATATAAAGTCTTCCGACAGTAGAGCGCCGATGACGGATCCGTCGAGTCAGTTTGACAGATGTCACTTTGACATTTGCGATCTGGATGACTCCGACTCCGAAACCACTGGGCTGATACAGCTTAGGAGCACTGATTACGCGGGCGCGGTCGAGGAGCGCTTGAAGGTCGTTATAGCTTTCGAAGGATACCCCAAGTCCAGTATTCGGCTGCGGCAAATGGAATCGTTTCAGCGATGTCTGAACACCATTATAGAGATGCAGCTACATAATGGTCTGCTTAAGGAGACGCCGTCTTTTGTAGATTATTACTTGAATCGGGGTGCTATAGTGGTGGTGTGCAAAGATTTGGAGAGTAGAGATTGGATCGTACGCGTTTTTCCGGGTCTAGAAGAGAGGATGAAGGAAAAGATTGTCCTTCTGAATTCGACCGTGAAACGCGTCTATTTGGCTGTCATGAAGTTACCTCGTACGTGCTGGCCCATGAAAGCGAGAGATGTTTTCAAATTGCTACAATACTTCAATCCGAAATTGAAAACTGTTTTGTGGAAAATTTACAGCCAGAAAGTAATGAACGGTGTTGAAGTCACCTCGTTTATCATGGACAGGGTCTCCGGGGAGATAGTCAGAGGCTATTCATTCAACAATGTTATAGATTATTCTCAGATGGAATTCGACATGATCGGTCAAAGAGAAATATACTTTGAGCCCTTGTCCGGTTTAGACGAGGATATCAGCAGTGTAGCGTCTAGAGTAAAACTCTTGGCAGAAATCAAATCAGCTGAATCGACCCCGAAAACTTCTCAAATCAGTTTGATTAATAAAGCTGTTGACGTGGAAAAAGTAATAAAAGTCATCGAGGCTCATGAAAATGAAGAGAAAGTATTCAAGTTTAACTTTCCCGATCCGAACGAAGACCCAGAAAGTTCTTTCCAACAAAAAGTCTTAGATAAACTAAAGGATGTCCAGTATGTGGGAGAGGATCGTGAAGTCTTCGTTTGGTCGAAAGACCTTGGCGGCGTCGAGGATGCGTCGAATGACGGCTTCATGTCCGACAGCAGCAATGTCACGTCTGCGCCCTTATCATATATGTCTGAGGGTACTGATCTCCGAGAGAATCTGTACGTGGACAGCAGTAAAAGGAAACCTTATTACAGGAGAACAAATTATCTACACGTCGAACCGGAGTTGAAGGTAGCTGTGACGCTTGAAGGATACCCGACAGACAAACTAGAAGCTCCCCATATGAAACTTATGAAACGGGCCTTCAAAGACTTTGTACATAAAGACGCGAAAATGAAGAGATTCGATTGTTTGATGCAGCCGCATTTTCATGACGTGTACCTAGCGAACGGCGCTTTGATTTACATATGCAATTGTATAGAAAGTAAAGATTATCTGCTGGAGGTTCTGCCCAAATTGATATTAGCTACCGGCTTAAGGTTGTCCGTGAGGGATATAAAAGATCTTGTAAGATACACTAGAGTCGTGTTTCGGTTGCCCAAAGAGATCGCTCATAAGGCTTCGGAAGAAGTATTGAATGCTTTGAAAAAATCTTATTCTGGCTTAAAAATTGAATGCTGGAAGTATTACTCTAGCGTTATTGGTAAACAGAGACGGGAGTTCGGCTTGGATCCGGAATCGTTATTAATTATAAAAAGTCCAGAGTTCAAACCTACGTACGAAGGTCACATTTTAGAATTCAGAATAATCGACCGTACCCAAAAATATCTAAAGGAATGCGAGAGAGCTTGCGTGAAAACCGAAGAAACTTCAGAATCGGAGAAAAGAAACCAAGAAATATTAAATAAAATTTATAATCCAATTAATCCGTCACTAAAGAATTTGTCTCTATCAAAAATACGTGCGGATCATTATTCTGATTTCATTGACGACGATCTAAAACTGTATATAGGTTCGGTCAATTATCCCGAGATTCGTATCGACTTGGAGTTGTTCAATACGATCAAGACAACATTCGAGAAGATTCTTTTGGAATCCATTGAGAAAGGCGTCATGGGGATCACCAATTTACCAGTGTTCCACGATGTATATCTTTTCGACGGTGTAATATTTGTGATTTGCCAGAACATGGCTTCGAGGCGGTGGATAGAAAATTCTCTGTCCTCAGTTAATTCAAGATTGGGAATAAGTCTGAAGCATACAGAGTATAGAGGAGCGGTTGGTATAATTAGTATGTCTTTACAAACCTCTAAAACACCTGAACGGGTGATCGAAGCGTTGCAAATAAGAAATCCCAGGCTAAGGACTAGATTTTGGCGTGTAATCAGCACTGTGCAGACGAAAAACAATCTGAATATAGTGTTGCAAATCGACAAGTTTTCAGCTCAAATCATAACTAGTAAAGATTTCGTGAATGTGGTCGGCAAGAAGTGTAAAGTTCACTTCAAATTGGGTCATTTAATGCCTTTGCTCGATAACAAGTCGAAACTGACTTGTTATAATAATAATTTCGAAAAATTAACTACAATAGAAGAGTACGCAAATATTGAAAACCTCGAAGCGACAACTAATCAGACGAAAACAAAAAAAAATAAGAAGAAAAGTAAAAATAAAAAAGGACTTAAAATTCCTAATACGGAAGCCGAATCTAAAATCACTTTGGTATCTGAAAGTTCAAACGATAATTCTACAACAGACACGTCTAAAGGAAATGAAAGTGTAAGACCCACTGACGACCATCAAGACAAAGGAATTATTTGTAACATAAATAACAACAGTCTGGTACATGCTATAATGAATGTAACAAAAAAGAATAATGATAAACAAAGTGAAGATAAACGACAAACAAAGGAACCAAATTCGAACTCTGACAGCTCAGATGACATTTTTACAGCAGACACTTCTAAAAATAATGATGAAATTGTTAATGTAACCAGGACTGAGGCAAGCCTACAACACGATAATTTGTTTAGTAACATTAATAATATTCTAGAACAGGCCATAATCAATGTATCAAAACAGAATAATGATGAACAAACGAAAGTTGAAATATTTGATGAGAAAACAAAAGAAAATAACGATCAAAGTAATAATTCTATAAATTTGGAAACAAATTCCAAGTCTGTTGACAATTCTGCAACAGAAACATTTAACTATATCCAGGAACATATTTGTGAAGAAAATACAGATGCTTCCGGCGTAGTTCGTAACTTCGAAGAACAACAAAACAATATAAGTGTAACAGAAAACAATGAACAAACAGTAATAGCAATTCGTCTAGATAAAGAAGAGTTGCTTAAAAACAGCATTGGAAATAAATTAGATGTTTTGGCTGCTGATAATGAGGCTGTTGAAATTGAAACGGAAACTATAGGTGTACCTTTAAGCGAAGACGATACAAACACCAAGGATGTAACGGACTCGACCGAAGCCATACCAGAAAACAATAATTTCGAATTGATTAATGAAGACGTAATGATTGAAAAAGAAACTCCAGCATCAGATTTTAATGATAACATAATAGAGACAAGCAAAACCCAATCTCCTCACGTCTCAGATCCCGAATCTGATTTGAACACAAACGGGCTACAGAAGATACTATTGAGGATACCTATAGAAATATTGCCTGAGGAGGAAGACTTGAATATGGTGTTCGAAGTTTTGAAGAATAAGAATCCAGGTCTGAATCCTGAAGTTTGGAAGATGCACGCCATCGGCTCGTATGATAAAGTGGAGGCACATCATACTATACACGTCACACGTGAATTGGTACAGCTAAAAACACCAGGACTAGAACGGAACGCTTCCCGCCAGTGCGTGAAGTGCGGCGCGCCCGCCGACTGGTACTGCTCGCGTTGCGCGATCACGCCCTACTGCTCGCAGACGTGCCAGACGAAGGACTGGACCGAGAGGCACAAGTCCGTCTGCCATTATCTAGCTCCTTTGAAAACTGCTGGAGGCTTCGAAGCTGAAGCCACGTCTAGTAAGAGCCTCTCTAATTCGACGCCGATGCGCTCCTCACACTCGCCACCGACAAAGCAGCAGCGGGGCGAAGCAGACGAAACTGACAATAAGGCCAAGAACATTCAAGAACCCAGGCAAAATTACCATCGCCCTTCGAACTCTGGCCCCAATAAAAACATTCCGGGGAAGAACCAAGATCCCAGAAGACCCGCTACATCCAGAGAAGCGATAGAAGAGGAGACTGAAGAACGGGGAGCCAGGAACTCGAAGCCAGCGGAGGTAACGAAAGACAAACATCATCCGATGAACCCGGTTACGTTCCAAAGGCGGCAGCTGAAGTCGAATCCGGTGGTGGATGCCCAGCCGGCGCCGAGAGAGCAGCAGCAGCCGGCGGCGGCCAGGGCGCCCGAGGCATCTCCTACTGAACAGACAGAGTCAGCTCGACGGACCCTCGTACCGGATAGGTGCCTCATAGACAGTCTCAGCGAGGGGGACGTGGTGCTGGTCTCGGTGGAGCTGAAGGCGAGCGAGTGCTGCACCAAGCAGGGCGGCTACGTGTGCCTCTCCATGCACGAGAAGTACGAGAGCGACTATCAGAAGCTGTGTGAGGACTACGTGCTGGACTGCGAGGCTGACTCGGACGAGTACAAAATTATAACGGGTGACACCTTCTCGTACCTGAGCCCCGAGGACGGAGGCTGGTACCGGGCGCGGGCGCTGAACACGACGATGGCTGCGCTACTGGATGGCAGCAAAGTCGTATACTTGAGAATGAACGACAAAGTGAAGAAGTTGCCGGCGAAGTACAGCGGGATACCGGAGTTCTGTTGCGTTTTGAACGCTGATGTCGAAGTGGGGTTAAATCTCAAATGTTCGTTATTGTCCAAAACACCCAATGGATTCAAAGTTACACTTGAAAACGTTGAAACCGAAGCTAACGTCGGCGAAGGGGAGATCACGAGGTGGATTCCCGAGGTGGATTATCCTCCACCGGTCAAGAACGTACCAGTTCAACGGTCAGTTGAAATACCTGAAGTTCCTCGTCCGGAGATCAAGAACAAGAGCAGAGTTATATTAGTAGATGCGACCGACGTGCAGCGTGTGTTTGTGAGGCCGGCCGACACGCGCTCGCAGAAGGCGTTCGATAATATACTACAAGATGTGCTACTGTACGGTACAACGGCTGAACCCTTGAAAGAGCCTCCAAGTAAGGGACAAACAGTAGTCAGCAAGTACACAGACAATTTGCACTACAGAGCATTGTGCAAACGTACTAGTGTTAACAAAAATAAATATTTACTTGAATATATTGAATACGGCAACATTGAAATAACTCAGCTGAATCGTCTGTACGCGTGCCCCGAGCACCTGTCGGTGACGTCACTAGCCAGTCTGACGTCACACGTGCAACTGGATACTACCGTCGGCGAGCTGACACCTCGCGCTCTAGAATACATTGAGACTATCAAAGAGGAGGAGATGATTTTGACTCTATCGAGCGGCGGCGACACAGCCCAGAGCGGCGCGGCCCTCGTCAACCTCACCCTGGTCAAGAACAACGAGAACGTCAATAAGAGAATAGAAGAACTGTGCACTCCCGAATGGAAGAAACTCGAGTTGAAAGGAGTCGATGTTATAGAAACAGAACGTCTGATGTACGGCACCGCTCTGGACTACATCGAGCTGCCGGCCGCGCCCTTCGACCTGCAAGTGCTGGACGAGGTTGGCCTCGACTCTGGGAACATATCTGGCTGCCCCACGAACTCGGACTACGTGCGATACGTCATGACGAAGCTCCCTGCGCGGATGAGGGAATACTGCGAGAGCGAATTCGGTCGGCAGCCGTACCTGCCCGCGGCCGAGGAGCTCTGCATCGCGCAGCTGCCGCCCTCCTCCGAATGGCACAGAGCGGTGGTGCTGGAACAGATCCTGGGGCCCGGCGGCGGCACCGCGCGCGTTCTGTTCCTGGACCACGGCAACGTGGCCGAGGTGCCGGTCTCCGCGCTGCGGAAGATGCTGGCGGAGTTCGTTACCGACCTGCCGGCTGTCGCCTGCCAGATCGTCATTGAAGATTTCCCGAAACAAGCAACGGCTGAGATGCTGTCGAAGGCGCGTCGGTTCATGAGCGGCCCGGACAAGGATCGCGCCGCCCAGCTGCCCGTCCGGGGCTGTGACAAGCAGGACGTCGGCATCTACACGATCCGCGTCCCGGAGCTGCTCCAAGCGATGACCGACCTGAAGACTGCTCAGATCAGACCAAGCCACGCTGCCTCCGTGAAGAACTTGAGATTCCGTCTCCGCGGTGAGACCACAATCTCAATACCGATTTTTTTAACCTGTATTAAGACTATGTTAAGTAGTTTTAAGGAATGTTCGATACATTGA
Protein
MSNHSRPQRRREWDPMRDDFNEHTYDVQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIAHKTIRKTQHDNKDRNYSTSRNGHCSRDEASSISSKGWNMRNLDDVMNNDEIDEIDDMIHEDHDDNLDLELDMLTLKQLKIKEEQLMCKRRLLLRHAEKRQVAPHSSAGRSVLPDGRIVVRNNANETDSAEVEPSFAGAGSESSETLCSCLTKTCDRASVSSASTTACDKCAGADKAKSTIHNKTDIKSSDSRAPMTDPSSQFDRCHFDICDLDDSDSETTGLIQLRSTDYAGAVEERLKVVIAFEGYPKSSIRLRQMESFQRCLNTIIEMQLHNGLLKETPSFVDYYLNRGAIVVVCKDLESRDWIVRVFPGLEERMKEKIVLLNSTVKRVYLAVMKLPRTCWPMKARDVFKLLQYFNPKLKTVLWKIYSQKVMNGVEVTSFIMDRVSGEIVRGYSFNNVIDYSQMEFDMIGQREIYFEPLSGLDEDISSVASRVKLLAEIKSAESTPKTSQISLINKAVDVEKVIKVIEAHENEEKVFKFNFPDPNEDPESSFQQKVLDKLKDVQYVGEDREVFVWSKDLGGVEDASNDGFMSDSSNVTSAPLSYMSEGTDLRENLYVDSSKRKPYYRRTNYLHVEPELKVAVTLEGYPTDKLEAPHMKLMKRAFKDFVHKDAKMKRFDCLMQPHFHDVYLANGALIYICNCIESKDYLLEVLPKLILATGLRLSVRDIKDLVRYTRVVFRLPKEIAHKASEEVLNALKKSYSGLKIECWKYYSSVIGKQRREFGLDPESLLIIKSPEFKPTYEGHILEFRIIDRTQKYLKECERACVKTEETSESEKRNQEILNKIYNPINPSLKNLSLSKIRADHYSDFIDDDLKLYIGSVNYPEIRIDLELFNTIKTTFEKILLESIEKGVMGITNLPVFHDVYLFDGVIFVICQNMASRRWIENSLSSVNSRLGISLKHTEYRGAVGIISMSLQTSKTPERVIEALQIRNPRLRTRFWRVISTVQTKNNLNIVLQIDKFSAQIITSKDFVNVVGKKCKVHFKLGHLMPLLDNKSKLTCYNNNFEKLTTIEEYANIENLEATTNQTKTKKNKKKSKNKKGLKIPNTEAESKITLVSESSNDNSTTDTSKGNESVRPTDDHQDKGIICNINNNSLVHAIMNVTKKNNDKQSEDKRQTKEPNSNSDSSDDIFTADTSKNNDEIVNVTRTEASLQHDNLFSNINNILEQAIINVSKQNNDEQTKVEIFDEKTKENNDQSNNSINLETNSKSVDNSATETFNYIQEHICEENTDASGVVRNFEEQQNNISVTENNEQTVIAIRLDKEELLKNSIGNKLDVLAADNEAVEIETETIGVPLSEDDTNTKDVTDSTEAIPENNNFELINEDVMIEKETPASDFNDNIIETSKTQSPHVSDPESDLNTNGLQKILLRIPIEILPEEEDLNMVFEVLKNKNPGLNPEVWKMHAIGSYDKVEAHHTIHVTRELVQLKTPGLERNASRQCVKCGAPADWYCSRCAITPYCSQTCQTKDWTERHKSVCHYLAPLKTAGGFEAEATSSKSLSNSTPMRSSHSPPTKQQRGEADETDNKAKNIQEPRQNYHRPSNSGPNKNIPGKNQDPRRPATSREAIEEETEERGARNSKPAEVTKDKHHPMNPVTFQRRQLKSNPVVDAQPAPREQQQPAAARAPEASPTEQTESARRTLVPDRCLIDSLSEGDVVLVSVELKASECCTKQGGYVCLSMHEKYESDYQKLCEDYVLDCEADSDEYKIITGDTFSYLSPEDGGWYRARALNTTMAALLDGSKVVYLRMNDKVKKLPAKYSGIPEFCCVLNADVEVGLNLKCSLLSKTPNGFKVTLENVETEANVGEGEITRWIPEVDYPPPVKNVPVQRSVEIPEVPRPEIKNKSRVILVDATDVQRVFVRPADTRSQKAFDNILQDVLLYGTTAEPLKEPPSKGQTVVSKYTDNLHYRALCKRTSVNKNKYLLEYIEYGNIEITQLNRLYACPEHLSVTSLASLTSHVQLDTTVGELTPRALEYIETIKEEEMILTLSSGGDTAQSGAALVNLTLVKNNENVNKRIEELCTPEWKKLELKGVDVIETERLMYGTALDYIELPAAPFDLQVLDEVGLDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLPAAEELCIAQLPPSSEWHRAVVLEQILGPGGGTARVLFLDHGNVAEVPVSALRKMLAEFVTDLPAVACQIVIEDFPKQATAEMLSKARRFMSGPDKDRAAQLPVRGCDKQDVGIYTIRVPELLQAMTDLKTAQIRPSHAASVKNLRFRLRGETTISIPIFLTCIKTMLSSFKECSIH

Summary

Uniprot
H9IWP3  
Pubmed
19121390   
EMBL
BABH01021093    BABH01021094    BABH01021095    BABH01021096   
Proteomes
UP000005204   
PRIDE
H9IWP3   
Pfam
PF01753   zf-MYND        + More
PF16012   DUF4780
PF00567   TUDOR
Interpro
IPR002893   Znf_MYND        + More
IPR031961   DUF4780       
IPR035437   SNase_OB-fold_sf       
IPR002999   Tudor       
Gene 3D
2.40.50.90    
ProteinModelPortal
H9IWP3  
PDB
2DJ8     E-value=0.00247378,     Score=104

Ontologies

KEGG
101739668    no KO assigned | (RefSeq) uncharacterized LOC101739668
GO
GO:0046872   GO:0003676   GO:0000166   GO:0020037   GO:0005874   GO:0007017   GO:0004559   GO:0006013   GO:0015923   GO:0005634   GO:0006260  

Topology

Length:
2399
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21985
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  2399
 
 

Population Genetic Test Statistics

Pi
230.529689
Theta
169.47363
Tajima's D
1.257797
CLR
0.279765
CSRT
0.732313384330783
Interpretation
Uncertain
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