Gene

KWMTBOMO06143

Pre Gene Modal

BGIBMGA001679

Annotation

hypothetical_protein_KGM_07372_[Danaus_plexippus]

Location

Bomo_Chr11(-):1214694-1220923      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.846

CDS

ATGGAGGTTACGATCGCGAACCCGAAGCCTAATCAAATGATAACATGCCCATACGAGAAGGCGCATATAGTAGAACACTACAGGATGCACATACACCTGCAGAAGTGCCGCAAACAACATCCGGCTTGTAACAAAGTGCAGTGCCCGTTTGATGCTACACACGTCGTTAATGATGTGGAACTCGATTTCCACGTAACGGTGTGCCCTAAACGTCACATGCTGGACACACAGCTGTACATCACGGATGACGAGTACAGACCTACAGTGGAAGTCCATGCCACACCGGTGCTGCCGAGCGACGAGAACTGGGACGACGAGACATCAACTTCATACATACCGGATCCATCGAAGAAGGGCGCCCATATAATAACAAAAGCTAAAGGCTTGACCCGCTCAGAGAGGCAGAGTCTGAGGAAGGAATTGATAAAGACTTACAGACCATTAGAATAG

Protein

MEVTIANPKPNQMITCPYEKAHIVEHYRMHIHLQKCRKQHPACNKVQCPFDATHVVNDVELDFHVTVCPKRHMLDTQLYITDDEYRPTVEVHATPVLPSDENWDDETSTSYIPDPSKKGAHIITKAKGLTRSERQSLRKELIKTYRPLE

Similarity

Belongs to the histone H1/H5 family.

Uniprot

A0A3S2NMP8   S4P7X6   A0A212F4H0   A0A2A4JP08   A0A2W1BI54   A0A0N1IP54   + More
A0A194Q622   A0A2H1V7Z0   A0A0L7KXF1   A0A1E1W5W0   A0A1I8MGF1   A0A1I8P0Y6   A0A0L0C4E6   A0A1B0FIT9   A0A1B0A780   A0A1A9ZHH4   A0A161M1N8   A0A1B0ADV7   A0A1B0B787   A0A1B0APA8   A0A1A9Z4I1   A0A1A9W8I4   A0A1B0FB72   T1HY36   A0A1A9UZY3   A0A1B0FNJ6   A0A1A9YKZ2   A0A0P4VQJ2   A0A069DT96   A0A023F9T9   A0A224XRR7   A0A0K8TQS3   A0A067RK80   A0A1A9VLD1   A0A0V0G7N0   A0A2P8XJ68   A0A1A9XRR5   A0A1A9WV75   T1GR92   A0A1B0GQU2   A0A182RVN6   A0A1Y1LRA8   A0A2P8XM15   A0A1Q3EWW8   A0A034VMQ8   A0A087UPK0   A0A0C9R2U2   W8B2S8   A0A0K8VGK8   A0A084VTZ4   W8AR74   A0A1I8PP89   A0A084WFB0   A0A2T7PGQ3   A0A182N333   A0A034WV66   A0A1B6I3Y8   A0A224Y972   A0A1W7R4L4   A0A023EJI4   A0A1I8NBU7   A0A182GFC8   A0A182KB59   A0A0A1XHV8   A0A182RLN4   A0A182XS36   A0A1A9VLE8   A0A034WMN7   K1REF4   A0A0K8V5L7   A0A0K8VZ85   A0A1B0BGC1   E2BA42   A0A131YNB4   A0A182V1U7   U5ER91   A0A2S2QS28   B0WM12   A0A1B0APA5   A0A1I8PEP5   A0A1B6GSR0   A0A1A9WRL6   H2Z0X7   A0A0K8WKN5   A0A146KZI9   A0A0A9WLS6   A0A2M4CZK9   A0A0L7RGV3   A0A2P8XXP7   A0A2M4CZJ8   B4LJJ8   Q16NU2  

Pubmed

23622113    22118469    28756777    26354079    26227816    25315136    + More
26108605    27129103    26334808    25474469    26369729    24845553    29403074    28004739    25348373    24495485    24438588    28797301    24945155    26483478    25830018    22992520    20798317    26830274    26823975    25401762    17994087    18057021    17510324   

EMBL

RSAL01000002    RVE54893.1    GAIX01006211    JAA86349.1    AGBW02010364    OWR48638.1    + More
NWSH01000868    PCG73787.1    KZ150331    PZC71353.1    KQ460596    KPJ13909.1    KQ459463    KPJ00455.1    ODYU01001127    SOQ36906.1    JTDY01004622    KOB67932.1    GDQN01008686    GDQN01004483    JAT82368.1    JAT86571.1    JRES01000926    KNC27238.1    CCAG010006519    GEMB01005628    JAR97694.1    JXJN01009420    JXJN01001290    CCAG010015600    ACPB03010710    CCAG010005686    GDKW01001878    JAI54717.1    GBGD01002027    JAC86862.1    GBBI01000465    JAC18247.1    GFTR01005286    JAW11140.1    GDAI01001348    JAI16255.1    KK852424    KDR24207.1    GECL01002404    JAP03720.1    PYGN01001947    PSN32050.1    CAQQ02088166    CAQQ02088167    AJVK01008656    GEZM01053289    JAV74106.1    PYGN01001740    PSN33047.1    GFDL01015269    JAV19776.1    GAKP01015867    GAKP01015865    JAC43085.1    KK120896    KFM79289.1    GBYB01001156    JAG70923.1    GAMC01015209    GAMC01015207    JAB91348.1    GDHF01014322    JAI37992.1    ATLV01016572    KE525094    KFB41438.1    GAMC01015210    GAMC01015208    JAB91345.1    ATLV01023325    KE525342    KFB48904.1    PZQS01000004    PVD32570.1    GAKP01000760    JAC58192.1    GECU01026550    GECU01026096    GECU01001394    JAS81156.1    JAS81610.1    JAT06313.1    GFPF01000983    MAA12129.1    GEHC01001545    JAV46100.1    GAPW01004468    JAC09130.1    JXUM01000955    JXUM01112915    KQ565636    KQ560113    KXJ70826.1    KXJ84430.1    GBXI01003750    JAD10542.1    GAKP01003517    JAC55435.1    JH816850    EKC42104.1    GDHF01018266    JAI34048.1    GDHF01008424    JAI43890.1    JXJN01013817    JXJN01013818    JXJN01013819    GL446664    EFN87451.1    GEDV01008499    JAP80058.1    GANO01003846    JAB56025.1    GGMS01011373    MBY80576.1    DS231993    EDS30826.1    GECZ01004313    JAS65456.1    GDHF01000662    JAI51652.1    GDHC01018509    JAQ00120.1    GBHO01034202    GBRD01001756    JAG09402.1    JAG64065.1    GGFL01006578    MBW70756.1    KQ414592    KOC70207.1    PYGN01001192    PSN36766.1    GGFL01006568    MBW70746.1    CH940648    EDW61566.1    KRF80070.1    CH477809    EAT36014.1   

Proteomes

UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    UP000037510    + More
UP000095301    UP000095300    UP000037069    UP000092444    UP000092445    UP000092460    UP000091820    UP000015103    UP000078200    UP000092443    UP000027135    UP000245037    UP000015102    UP000092462    UP000075900    UP000054359    UP000030765    UP000245119    UP000075884    UP000069940    UP000249989    UP000075881    UP000076407    UP000005408    UP000008237    UP000075903    UP000002320    UP000007875    UP000053825    UP000008792    UP000008820   

Pfam

PF05253   zf-U11-48K        + More
PF00067   p450
PF02949   7tm_6
PF00538   Linker_histone

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR022776   TRM13/UPF0224_CHHC_Znf_dom       
IPR036396   Cyt_P450_sf       
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR004117   7tm6_olfct_rcpt       
IPR005819   Histone_H5       
IPR000415   Nitroreductase-like       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR005818   Histone_H1/H5_H15       

SUPFAM

SSF57667   SSF57667        + More
SSF48264   SSF48264       
SSF55469   SSF55469       
SSF46785   SSF46785       

Gene 3D

1.10.630.10     1.10.10.10     3.40.109.10    

CDD

cd00073  H15

ProteinModelPortal

A0A3S2NMP8   S4P7X6   A0A212F4H0   A0A2A4JP08   A0A2W1BI54   A0A0N1IP54   + More
A0A194Q622   A0A2H1V7Z0   A0A0L7KXF1   A0A1E1W5W0   A0A1I8MGF1   A0A1I8P0Y6   A0A0L0C4E6   A0A1B0FIT9   A0A1B0A780   A0A1A9ZHH4   A0A161M1N8   A0A1B0ADV7   A0A1B0B787   A0A1B0APA8   A0A1A9Z4I1   A0A1A9W8I4   A0A1B0FB72   T1HY36   A0A1A9UZY3   A0A1B0FNJ6   A0A1A9YKZ2   A0A0P4VQJ2   A0A069DT96   A0A023F9T9   A0A224XRR7   A0A0K8TQS3   A0A067RK80   A0A1A9VLD1   A0A0V0G7N0   A0A2P8XJ68   A0A1A9XRR5   A0A1A9WV75   T1GR92   A0A1B0GQU2   A0A182RVN6   A0A1Y1LRA8   A0A2P8XM15   A0A1Q3EWW8   A0A034VMQ8   A0A087UPK0   A0A0C9R2U2   W8B2S8   A0A0K8VGK8   A0A084VTZ4   W8AR74   A0A1I8PP89   A0A084WFB0   A0A2T7PGQ3   A0A182N333   A0A034WV66   A0A1B6I3Y8   A0A224Y972   A0A1W7R4L4   A0A023EJI4   A0A1I8NBU7   A0A182GFC8   A0A182KB59   A0A0A1XHV8   A0A182RLN4   A0A182XS36   A0A1A9VLE8   A0A034WMN7   K1REF4   A0A0K8V5L7   A0A0K8VZ85   A0A1B0BGC1   E2BA42   A0A131YNB4   A0A182V1U7   U5ER91   A0A2S2QS28   B0WM12   A0A1B0APA5   A0A1I8PEP5   A0A1B6GSR0   A0A1A9WRL6   H2Z0X7   A0A0K8WKN5   A0A146KZI9   A0A0A9WLS6   A0A2M4CZK9   A0A0L7RGV3   A0A2P8XXP7   A0A2M4CZJ8   B4LJJ8   Q16NU2  

KEGG

101745848    no KO assigned | (RefSeq) gametocyte-specific factor 1-like

GO

GO:0016301   GO:0020037   GO:0005506   GO:0016705   GO:0005549   GO:0004984   GO:0016021   GO:0007165   GO:0003677   GO:0000786   GO:0016491   GO:0005634   GO:0006334  

PANTHER

PTHR21137  

Subcellular location

Chromosome  
Nucleus  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14356

outside

1  -  149

 

 

Pi

156.354805

Theta

165.117233

Tajima's D

-0.671056

CLR

0.272044

CSRT

0.204039798010099

Interpretation

Uncertain