Gene

KWMTBOMO06133

Pre Gene Modal

BGIBMGA001743

Annotation

PREDICTED:_zinc_finger_protein_271-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr11(+):886875-888520      View in EpiBrowser

Full name

Zinc finger protein 22      

Alternative Name

Zinc finger protein KOX15
Zinc finger protein Krox-26

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.311

CDS

ATGTGGGTCCACACCGGCGAGAAACGCTTCAAATGCGACCGCTGCCCGAAGAGCTTCACCCAGAAGACGAACCTGGTGTTCCACCTGCGCGTGCACAGCGCCACCCGACCCTCGTACGAGTGCCCCCTGTGCGGGAAACATTTCGCCTTCTATAACAACAGGAGGCGTCATATGTTCATCCACACTGGCCTGAAGCCGTACAAATGCGACACGTGCCTCAAGTGCTTCACAACGTCCGGCGAGCTGCGCGCGCACGTCGAGCACGTGCACATGAAGAAGCCGTGGCCGAAGCGCGCGCGTACCAACAGACAGAGCGACGCGCTCGCCGACTAG

Protein

MWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPWPKRARTNRQSDALAD

Description

Binds DNA through the consensus sequence 5'-CAATG-3'. May be involved in transcriptional regulation and may play a role in tooth formation (By similarity).

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Acetylation   Complete proteome   DNA-binding   Metal-binding   Nucleus   Phosphoprotein   Reference proteome   Repeat   Transcription   Transcription regulation   Zinc   Zinc-finger   Polymorphism  

Feature

chain  Zinc finger protein 22
sequence variant  In dbSNP:rs3740093.

Uniprot

H9IWW0   A0A2A4KA39   A0A3S2TJB5   A0A2H1W3X2   A0A194Q527   A0A194QVL0   + More
A0A1E1WHH4   A0A2A4K8P9   A0A2W1BJN6   A0A194QRI4   A0A194Q632   A0A2A4JSJ1   H9IWW1   A0A2A4JTI5   A0A212ET42   A0A212F5H6   A0A2H1VJD2   A0A0L7LGN8   A0A0L7LH80   A0A2A4K955   A0A2H1VTH9   S4PE06   S4PEJ9   A0A2H1W0Z4   A0A2D4GJC2   A7SWT3   A0A2D4PD48   Q8VEC1   A0A3B2W7H5   A7S0X6   A7T2W2   E9Q5G8   S4P1V0   A0A091DUI9   A0A3Q0ECV2   V4A5U0   A0A2A4JTE3   A0A061IJP8   A0A3Q3IL18   A0A0L8HUG3   A0A0L8HUD4   A0A3N0ZA52   A0A0P6JD94   A0A0L8H6P6   A0A0L8IAJ3   A0A3Q7MCV9   A0A3B4BJ45   A0A1W4XVQ6   A0A1W4XV68   A0A1W4XV63   A7T1L9   A0A3P8NTM5   A7TAT8   A0A1W4Y5B1   A0A1W4Y4W3   A0A1W4Y5G4   A0A3P9DGF5   A0A3B4F2M7   A0A2B4REX0   K1PPH7   A0A0K8W733   K9KBQ3   A0A2W1BLU1   A0A0L8HTA0   A0A0K8U4S7   A0A3B5A840   A0A1U7SUI7   G3IEA2   A0A3Q1ECG0   A0A3B5LI64   A0A3N0YZ26   A0A0R4IXX9   A0A0L8HV31   B7ZUX7   V4AAN6   A0A3Q0DM75   A8WFV9   A7T4M0   A0A2R8ZMM4   A0A3Q2Q910   A0A146VLS6   A0A0L8I532   U3AYV7   A0A2K5RJT2   A0A2I3HJF5   A0A146ZSC1   F6Y801   A0A3Q1FXM1   A0A0L8FS27   A0A2I2YAN2   A0A2J8XT63   H2Q1U7   A0A024R7T4   Q5R4X5   P17026   A0A3Q1H518   A0A0L8H224   A0A3P9CKJ5   A0A0L8GTC8  

Pubmed

19121390    26354079    28756777    22118469    26227816    23622113    + More
17615350    15489334    19468303    23254933    23929341    25463417    25186727    22992520    21804562    23594743    22722832    25243066    19892987    22398555    16136131    11181995    1421376    14630903    14702039    15164054    1946370    2288909    24275569    16959974   

EMBL

BABH01021017    BABH01021018    BABH01021019    NWSH01000027    PCG80590.1    RSAL01000098    + More
RVE47648.1    ODYU01006174    SOQ47799.1    KQ459463    KPJ00464.1    KQ461181    KPJ07591.1    GDQN01004610    JAT86444.1    PCG80587.1    KZ150245    PZC71883.1    KPJ07590.1    KPJ00465.1    NWSH01000652    PCG75007.1    BABH01021020    BABH01021021    BABH01021022    BABH01021023    PCG75008.1    AGBW02012649    OWR44658.1    AGBW02010195    OWR48987.1    ODYU01002887    SOQ40937.1    JTDY01001260    KOB74361.1    JTDY01001125    KOB74797.1    PCG80589.1    ODYU01004320    SOQ44066.1    GAIX01001789    JAA90771.1    GAIX01001539    JAA91021.1    ODYU01005670    SOQ46765.1    IACJ01133402    LAA59819.1    DS469867    EDO31838.1    IACN01068181    LAB55950.1    BC019219    AAH19219.1    CT009755    DS469562    EDO42660.1    DS470341    EDO29702.1    GAIX01012305    JAA80255.1    KN122033    KFO33955.1    KB202444    ESO90340.1    NWSH01000707    PCG74670.1    KE667083    ERE87554.1    KQ417280    KOF92851.1    KOF92821.1    RJVU01001269    ROL55261.1    GEBF01001268    JAO02365.1    KQ419049    KOF84759.1    KQ416225    KOF98035.1    DS470123    EDO30148.1    DS474437    EDO26879.1    LSMT01000709    PFX14928.1    JH816467    EKC18365.1    GDHF01005373    JAI46941.1    JL621397    AEP99455.1    KZ150166    PZC72653.1    KQ417336    KOF92441.1    GDHF01031004    JAI21310.1    JH002160    EGW13504.1    RJVU01019022    ROL51262.1    BX004964    BX248582    KQ417236    KOF93064.1    BC171385    AAI71385.1    ESO90341.1    BC154476    AAI54477.1    DS470906    EDO29094.1    AJFE02056893    GCES01068426    JAR17897.1    KQ416560    KOF96464.1    GAMT01006389    GAMT01006388    GAMS01007182    GAMS01007181    GAMR01009212    GAMR01009211    GAMQ01003414    GAMQ01003413    GAMP01004019    GAMP01004018    JAB05473.1    JAB15954.1    JAB24720.1    JAB38437.1    JAB48736.1    ADFV01064219    GCES01017225    JAR69098.1    KQ427054    KOF67463.1    CABD030071137    NDHI03003318    PNJ85226.1    AACZ04049673    GABC01010476    GABF01005519    GABD01007771    GABE01003637    GABE01003636    NBAG03000468    JAA00862.1    JAA16626.1    JAA25329.1    JAA41102.1    PNI20895.1    CH471160    EAW86633.1    CR861114    S50223    AY137767    BT009806    AK291508    AL353801    BC010642    BC041139    BC053687    M77172    X52346    KQ419523    KOF83316.1    KQ420458    KOF80213.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000037510    UP000001593    UP000000589    UP000028990    UP000189704    UP000030746    UP000030759    UP000261600    UP000053454    UP000286641    UP000261520    UP000192224    UP000265100    UP000265160    UP000261460    UP000225706    UP000005408    UP000261400    UP000001075    UP000257200    UP000261380    UP000000437    UP000240080    UP000265000    UP000008225    UP000233040    UP000001073    UP000002281    UP000001519    UP000002277    UP000001595    UP000005640    UP000265040   

PRIDE

H9IWW0    H9IWW1    E9Q5G8    G3IEA2    A0A024R7T4    P17026    + More

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF05485   THAP
PF12171   zf-C2H2_jaz
PF16622   zf-C2H2_11
PF01352   KRAB
PF00856   SET

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR006612   THAP_Znf       
IPR013087   Znf_C2H2_type       
IPR038441   THAP_Znf_sf       
IPR022755   Znf_C2H2_jaz       
IPR017114   YY-1-like       
IPR041697   Znf-C2H2_11       
IPR001909   KRAB       
IPR036051   KRAB_dom_sf       
IPR017921   Znf_CTCHY       
IPR001214   SET_dom       
IPR003656   Znf_BED       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

Gene 3D

3.30.40.180    

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9IWW0   A0A2A4KA39   A0A3S2TJB5   A0A2H1W3X2   A0A194Q527   A0A194QVL0   + More
A0A1E1WHH4   A0A2A4K8P9   A0A2W1BJN6   A0A194QRI4   A0A194Q632   A0A2A4JSJ1   H9IWW1   A0A2A4JTI5   A0A212ET42   A0A212F5H6   A0A2H1VJD2   A0A0L7LGN8   A0A0L7LH80   A0A2A4K955   A0A2H1VTH9   S4PE06   S4PEJ9   A0A2H1W0Z4   A0A2D4GJC2   A7SWT3   A0A2D4PD48   Q8VEC1   A0A3B2W7H5   A7S0X6   A7T2W2   E9Q5G8   S4P1V0   A0A091DUI9   A0A3Q0ECV2   V4A5U0   A0A2A4JTE3   A0A061IJP8   A0A3Q3IL18   A0A0L8HUG3   A0A0L8HUD4   A0A3N0ZA52   A0A0P6JD94   A0A0L8H6P6   A0A0L8IAJ3   A0A3Q7MCV9   A0A3B4BJ45   A0A1W4XVQ6   A0A1W4XV68   A0A1W4XV63   A7T1L9   A0A3P8NTM5   A7TAT8   A0A1W4Y5B1   A0A1W4Y4W3   A0A1W4Y5G4   A0A3P9DGF5   A0A3B4F2M7   A0A2B4REX0   K1PPH7   A0A0K8W733   K9KBQ3   A0A2W1BLU1   A0A0L8HTA0   A0A0K8U4S7   A0A3B5A840   A0A1U7SUI7   G3IEA2   A0A3Q1ECG0   A0A3B5LI64   A0A3N0YZ26   A0A0R4IXX9   A0A0L8HV31   B7ZUX7   V4AAN6   A0A3Q0DM75   A8WFV9   A7T4M0   A0A2R8ZMM4   A0A3Q2Q910   A0A146VLS6   A0A0L8I532   U3AYV7   A0A2K5RJT2   A0A2I3HJF5   A0A146ZSC1   F6Y801   A0A3Q1FXM1   A0A0L8FS27   A0A2I2YAN2   A0A2J8XT63   H2Q1U7   A0A024R7T4   Q5R4X5   P17026   A0A3Q1H518   A0A0L8H224   A0A3P9CKJ5   A0A0L8GTC8  

PDB

2I13     E-value=1.32755e-13,     Score=178

KEGG

101738156    no KO assigned | (RefSeq) zinc finger protein 271-like

GO

GO:0008270   GO:0003677   GO:0005634   GO:0003676   GO:0006355   GO:0046872   GO:0008168   GO:0005654   GO:0000981   GO:0042476   GO:0030246   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

Subcellular location

Nucleus  

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0008

Exp number, first 60 AAs:

0.0008

Total prob of N-in:

0.31215

outside

1  -  110

 

 

Pi

142.247698

Theta

133.173166

Tajima's D

0.207458

CLR

0.626094

CSRT

0.425828708564572

Interpretation

Uncertain