Gene

KWMTBOMO06132

Annotation

PREDICTED:_zinc_finger_protein_271-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr11(+):879935-885241      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.397

CDS

ATGGCGGACGTGAAACGCCGCCGAACCCAAGACCTGGACGAGAATCTGTTCACGATAACTTCGCTCACGTACGAGGAGCAGATAGCGGAGATAGAGAAGAGGCAGGAGCTGAACAGCTACAAGAGCGCCCCGTACAAGTGCACCACGTGCTACAGGGGCTTCCTCAACAGGGAGAGGTTCGAGGCGCACTCCGTGAGGCACAGCGACGTGAGTGGCGTCTTCGAATGCTTCATATGTAAATCCAGAATGAAATCCAGCCGCGCTCTACGCAAACACCTCACCGGACAGCATACAGAGAAAATTATATGCAAAGGGTGTCCTTTCACAACGAGGAACAGGGGCGTGGCCAGAGAACACGAAAAATGGCACGCTGGTACTAAATACCAGTGCCCGCATTGCTGTAGTGAATTCGATAAACTGACCACATACATGGGCCACTTGAGGATCAAGCACGTGTGCGACTTCGTGTGCGAGCTTTGCGGCTACACGTTCGTCAGCAAGAAGGGGGTCGACGTTCACAAGAAGAAGAAGCACAGGCTCGCCGACAAGCCGGATCTGCTCGAAGGACCATTCTGTGAGCTATGCGAGGTCAAATTCAAGACTCAAATGGCCTACGATCGACACTTGAGGTTGTCGTCGAGACACAGCAAAGACAGCGATCCGAATCGCTTAAGGAACGATTCTCAGAGCGTCTCGCAGCGCAGCGACCGCGTCGTGCGCCGCATAGAGAGACGCCCCGTCATCCACGGGCGGGACGCGGGGGCGGAGCGCGGGGCGGCCGGGCCCGTCACGTGCGAGCAGGTGCGGGGGCGGGGTGGGGGTCTTGCGTGTCTGTGGATGCGTGATATATCTGACCAAACCTTAATGAAAGACATTAATGTCTTCAAACTTCAAAACGTTTCACATAACGCTCCTGAGTTGAATTATTATTTTATTTGA

Protein

MADVKRRRTQDLDENLFTITSLTYEEQIAEIEKRQELNSYKSAPYKCTTCYRGFLNRERFEAHSVRHSDVSGVFECFICKSRMKSSRALRKHLTGQHTEKIICKGCPFTTRNRGVAREHEKWHAGTKYQCPHCCSEFDKLTTYMGHLRIKHVCDFVCELCGYTFVSKKGVDVHKKKKHRLADKPDLLEGPFCELCEVKFKTQMAYDRHLRLSSRHSKDSDPNRLRNDSQSVSQRSDRVVRRIERRPVIHGRDAGAERGAAGPVTCEQVRGRGGGLACLWMRDISDQTLMKDINVFKLQNVSHNAPELNYYFI

Uniprot

A0A212F5H6   A0A3S2TJB5   A0A194Q527   A0A194QVL0   A0A2H1W3X2   A0A194QAM2   + More
A0A2A4JTI5   A0A2A4JSJ1   A0A1E1WHH4   H9IWW1   A0A2W1BCB5   A0A212ET42   A0A2A4K955   A0A2A4K8P9   A0A2W1BFA5   H9JCD1   A0A3S2LJV4   A0A2W1B1S3   A0A0N1IQ78   A0A3S2NNE3   A0A2H1V5K9   A0A2W1BE97   A0A2H1WDF0   A0A212F9K1   H9JMD3   A0A212FC38  

Pubmed

22118469    26354079    19121390    28756777   

EMBL

AGBW02010195    OWR48987.1    RSAL01000098    RVE47648.1    KQ459463    KPJ00464.1    + More
KQ461181    KPJ07591.1    ODYU01006174    SOQ47799.1    KPJ00466.1    NWSH01000652    PCG75008.1    PCG75007.1    GDQN01004610    JAT86444.1    BABH01021020    BABH01021021    BABH01021022    BABH01021023    KZ150504    PZC70656.1    AGBW02012649    OWR44658.1    NWSH01000027    PCG80589.1    PCG80587.1    KZ150313    PZC71450.1    BABH01031546    RSAL01000087    RVE48251.1    KZ150681    PZC70388.1    KQ459718    KPJ20255.1    RSAL01000025    RVE52097.1    ODYU01000804    SOQ36135.1    KZ150164    PZC72671.1    ODYU01007811    SOQ50892.1    AGBW02009568    OWR50408.1    BABH01040066    BABH01040067    AGBW02009230    OWR51306.1   

Proteomes

UP000007151    UP000283053    UP000053268    UP000053240    UP000218220    UP000005204    + More

PRIDE

H9IWW1    H9JCD1    H9JMD3   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF05485   THAP
PF12171   zf-C2H2_jaz
PF03820   Mtc

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR006612   THAP_Znf       
IPR012934   Znf_AD       
IPR038441   THAP_Znf_sf       
IPR022755   Znf_C2H2_jaz       
IPR004686   Mtc       

SUPFAM

SSF57667   SSF57667       

Gene 3D

3.30.40.180    

ProteinModelPortal

A0A212F5H6   A0A3S2TJB5   A0A194Q527   A0A194QVL0   A0A2H1W3X2   A0A194QAM2   + More
A0A2A4JTI5   A0A2A4JSJ1   A0A1E1WHH4   H9IWW1   A0A2W1BCB5   A0A212ET42   A0A2A4K955   A0A2A4K8P9   A0A2W1BFA5   H9JCD1   A0A3S2LJV4   A0A2W1B1S3   A0A0N1IQ78   A0A3S2NNE3   A0A2H1V5K9   A0A2W1BE97   A0A2H1WDF0   A0A212F9K1   H9JMD3   A0A212FC38  

PDB

5T00     E-value=0.000679674,     Score=100

KEGG

101738156    no KO assigned | (RefSeq) zinc finger protein 271-like

GO

GO:0005634   GO:0003677   GO:0008270   GO:0003676   GO:0046872   GO:0015075   GO:0016021   GO:0030246   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

PANTHER

PTHR11153  

Length:

312

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00519

Exp number, first 60 AAs:

0

Total prob of N-in:

0.28522

outside

1  -  312

 

 

Pi

143.054769

Theta

63.046755

Tajima's D

-0.539778

CLR

0.209716

CSRT

0.235088245587721

Interpretation

Uncertain