Silkworm Genome Informatics Database

Gene

KWMTBOMO06117

Pre Gene Modal

BGIBMGA001690

Annotation

ATM_interactor_[Papilio_xuthus]

Location

Bomo_Chr11(-):666405-670914 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.147

CDS

ATGGCCGAGGGTGAGATACCTGGTGAGGCCGAAGTGGTCGAGCTTGGTGCGGAGGAGCCGCTGGTTTGTCGGGGGTGCCTCGCGAACGCCGGCGAAATGAAAAACATGTACGATTGGGGACTGAATGAGGAATTCTTCAAGATTACCGATATAAAGGCTATCCGGACGGAGAACATCTCTGAATTCCTTTGCACGACCTGCGAGGATATGCTGATGATCTGCAAAAGATTTAAATCACAATGCCAGCAATCAAACAGCATCATGATGAACTGGATCAAGACAACGACATCGGATTCATCGGTCCCGCAGAATATAACTCGTCACATCCTGACCGAGAATAAGCTGACCGTAATCCTGCTGGCGCCGGACCGTCTGGCCAAAGTCTACATTACGTGTCCCTTGGACTGCAACGAGAGATACATAAAGAAACGGGATCTCCTAACGCATTTGAATAGAAAACACAACTACAGCAAGGACTTCGCTGTGGAATTGCAGTATTACTGTTCGTATGAAACGTGCACTTACAGCATGAAATTCGGCAGCAAATGGTTCGCCGAACGCAAGTTTCTGAATCAGCATTACAACAAAGTGCACAGCATTAAAGTCATTGAATGCGAGCGATGCAACAAAGGCTTTCCTTCCGAGACGGATTACGCGAGACACGTGCCTGCTTGCAGTAAAACATTTCAGTGTCCGTTGTGCAATAAAGAGTACGCTTCGAGAGATCGCTACACTGTGCACCTGCTAAGGAAACACCCGCAGATACATAAAGAGTTCAAGATGAATAATAAAGCGGAAAAACGCAAGTCCGCTGTGCTCGCGAAGAACAAGAAAAAGAAAAAAGAATCTTTCGAAGATTACATTTGTGATAGTCCGAAACGCAGTTCAGCGACTCAGACGCGGCTCGATGATAAAATTAAGAATGACGTCACGCTGCCATCTTGGTCCGTGCCCGGCAGGAGCGACGGCCTCGAAATCAAAACAGACGAAATATCGACGCAGACTGTTTTCGAAGATCTGTTGTCTATAAAATCGCAGACGAGCGAAGACGAATCGATATTTTGTTCGGAAACAGTATCGCTGTCTGATATACAAACTCAAACATTTCCGATCGAATTTGGTTTGAGTCGTTCGAATAAGGAGACGGTCACGAGCGAGACCCAGTCACCGGATTTGAGTATTAAAGAGACTCAAACATGTTTATGCCTATACGAAACATCGAAAAGTGGAGGTAGATATCAGGACGGCCTTTCGTCAAGTCCGTGCAGCAACAATTTCATATCAACGGAGACTCAAACGGGCGACCTCAAATGCTGCGTCAAATCGGATGTGCTTTTGAGCTTTAATTCGACCGAAACTCAAACTTGCTTCGACGATGACACCCAAGGAAGCGATAACATTATGTGA

Protein

MAEGEIPGEAEVVELGAEEPLVCRGCLANAGEMKNMYDWGLNEEFFKITDIKAIRTENISEFLCTTCEDMLMICKRFKSQCQQSNSIMMNWIKTTTSDSSVPQNITRHILTENKLTVILLAPDRLAKVYITCPLDCNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKEFKMNNKAEKRKSAVLAKNKKKKKESFEDYICDSPKRSSATQTRLDDKIKNDVTLPSWSVPGRSDGLEIKTDEISTQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIKETQTCLCLYETSKSGGRYQDGLSSSPCSNNFISTETQTGDLKCCVKSDVLLSFNSTETQTCFDDDTQGSDNIM

Uniprot

H9IWQ8 A0A1E1VYI7 A0A0N1IN54 A0A0N1PHU1 A0A2W1BHU2 A0A212EJC1 + More
A0A2H1V2D0 A0A0L7KTX4 W8C3T1 A0A0A1XR21 A0A1I8PW72 A0A182K0U7

Pubmed

19121390 26354079 28756777 22118469 26227816 24495485 + More
25830018

EMBL

BABH01020989 GDQN01011305 JAT79749.1 KQ458725 KPJ05375.1 KQ460046 + More
KPJ18012.1 KZ150196 PZC72330.1 AGBW02014496 OWR41575.1 ODYU01000147 SOQ34424.1 JTDY01005717 KOB66702.1 GAMC01002632 JAC03924.1 GBXI01000543 JAD13749.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151 UP000037510 UP000095300 + More
UP000075881

PRIDE

H9IWQ8

Pfam

PF07776 zf-AD + More
PF00096 zf-C2H2

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9IWQ8 A0A1E1VYI7 A0A0N1IN54 A0A0N1PHU1 A0A2W1BHU2 A0A212EJC1 + More
A0A2H1V2D0 A0A0L7KTX4 W8C3T1 A0A0A1XR21 A0A1I8PW72 A0A182K0U7

PDB

6B0R E-value=0.0188685, Score=90

KEGG

101742376 no KO assigned | (RefSeq) uncharacterized LOC101742376

GO

GO:0005634 GO:0008270 GO:0003676 GO:0046872 GO:0005975 GO:0030246 GO:0004559 GO:0006013 GO:0015923 GO:0006260

Length:

468

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00088

outside

1 - 468

Pi

198.461391

Theta

151.567702

Tajima's D

0.825365

CLR

1.46572

CSRT

0.609919504024799

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics