SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06113
Pre Gene Modal
BGIBMGA001734
Annotation
PREDICTED:_MIP18_family_protein_CG7949_[Amyelois_transitella]
Full name
MIP18 family protein galla-2       + More
Cytosolic iron-sulfur assembly component 2B      
Alternative Name
Mitotic spindle-associated MMXD complex subunit MIP18
Location in the cell
Nuclear   Reliability : 2.531
 

Sequence

CDS
ATGACCAAAACAGCGGATAACATCAACCCTCACATTTACGAGAAGGGTTCAGAACGGGAGATCACTTCTTCGGAACGCGACGAAGACTTGCAAGATGAATTTGATGATCGCGAAATATTTGATTTAATACGAAATATAAATGATCCTGAACACCCATTGACACTCGAGGAGCTCAGGGTGGTGGAAGAGAAGAATATAATCGTTAATAACGATGATAGTACTGTATTAGTCAATTTTACACCGACAATTCCCCATTGCAGTATGGCGACTCTGATAGGTCTTTCAATACGAGTTCAACTACTCCGAGCTCTGCCAAGCCGTTTCAAAGTGACCGTACAAGTATCGGAGGGCTCTCACGCTTCCGAACATGCGGTCAACAAACAGTTAGCGGACAAGGAAAGAGTTGCTGCAGCTTTAGAGAACAATAATCTACTGCAAATCATCAATCAATGCATAGCTGTTTAA
Protein
MTKTADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERVAAALENNNLLQIINQCIAV

Summary

Description
Component of the crb-galla-Xpd (CGX) complex which is essential for proper mitotic chromosome segregation in early embryos. The CGX complex is also required for cell proliferation in developing wing disks. In the CGX complex, acts with crb to recruit Xpd thus forming the functional complex.
Component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. As a CIA complex component and in collaboration with CIAO1 and MMS19, binds to and facilitates the assembly of most cytosolic-nuclear Fe/S proteins. As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation, probably by facilitating iron-sulfur cluster assembly into ERCC2/XPD.
Subunit
Component of the CGX complex composed of crb, galla (galla-1 or galla-2) and Xpd. Interacts with crb (via intracellular domain). Also able to interact with Xpd in the absence of crb.
Component of the CIA complex. Component of the MMXD complex, which includes CIAO1, ERCC2, CIAO2B, MMS19 and SLC25A5. Interacts with CIAO1, ERCC2 and MMS19; the interactions are direct.
Miscellaneous
The name 'galla' means splitting in Korean and is derived from its role in chromosome segregation.
Similarity
Belongs to the MIP18 family.
Keywords
Cell cycle   Cell division   Chromosome partition   Complete proteome   Mitosis   Reference proteome   Cytoplasm   Cytoskeleton   Nucleus  
Feature
chain  MIP18 family protein galla-2
EMBL
BABH01020984    KQ458725    KPJ05364.1    AGBW02014764    OWR41087.1    KQ460546    + More
KPJ14048.1    GDQN01010566    JAT80488.1    GAIX01014210    JAA78350.1    AK405069    BAM20471.1    NWSH01000719    PCG74632.1    ODYU01004997    SOQ45435.1    KQ977171    KYN05134.1    GL762419    EFZ21581.1    KQ982045    KYQ60751.1    CCAG010008857    KQ981241    KYN44305.1    JXJN01011858    GL439566    EFN67069.1    KQ979602    KYN20531.1    GL887726    EGI70089.1    CH902618    EDV40651.1    JRES01000828    KNC27998.1    KQ976421    KYM89067.1    ADTU01024725    GFDF01010024    JAV04060.1    NEDP02004027    OWF47151.1    AJWK01018774    CH940647    EDW69563.1    CH379069    EAL31157.1    GL452030    EFN78035.1    CM000159    EDW94046.1    CH479215    EDW33507.1    CP012525    ALC44099.1    CH477404    EAT41660.1    EAT41661.1    KQ414664    KOC65166.1    OUUW01000009    SPP84983.1    LBMM01000921    KMQ97210.1    AXCN02000934    BC168797    AAI68797.1    KK107019    QOIP01000007    EZA62738.1    RLU21071.1    GAPW01005375    GAPW01005374    JAC08223.1    BC089077    AAH89077.1    CH954178    EDV51334.1    GECU01011090    JAS96616.1    CH964154    EDW79888.1    KZ288250    PBC31059.1    CM004475    OCT77526.1    KX532107    ANY27917.1    AE014296    CM000363    CM002912    EDX09997.1    KMY98888.1    GEBQ01018983    JAT20994.1    AAAB01008960    EAA11936.3    APCN01004380    GDKW01001824    JAI54771.1    ACPB03009066    GAHY01001730    JAA75780.1    GDHF01027849    GDHF01027321    JAI24465.1    JAI24993.1    CH480815    EDW41012.1    GFFV01004581    JAV35364.1    BT024397    ABC86459.1    CH916366    CH916846    EDV97761.1    EDW05094.1    CH933809    EDW18522.1    AK003830    BC055880    AABR07042638    GAKP01017848    GAKP01017846    GAKP01017844    GAKP01017842    JAC41110.1    BC087289    CM004474    AAH87289.1    OCT79498.1    KB201262    ESO98237.1    AADN05000558    JH001411    EGW11238.1    CVRI01000075    CRL08338.1    GABZ01002815    JAA50710.1    GFTR01002714    JAW13712.1    BC123354    AAI23355.1    AANG04002512    AGTP01009761   
Pfam
PF01883   FeS_assembly_P
Interpro
IPR002744   MIP18-like        + More
IPR034904   FSCA_dom_sf       
IPR039796   MIP18       
SUPFAM
SSF117916   SSF117916       
Gene 3D
PDB
3UX3     E-value=1.76757e-22,     Score=256

Ontologies

Topology

Subcellular location
Nucleus  
Cytoplasm  
Cytoskeleton  
Spindle  
Length:
154
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.8223
Exp number, first 60 AAs:
0
Total prob of N-in:
0.40170
outside
1  -  154
 
 

Population Genetic Test Statistics

Pi
237.519795
Theta
225.301967
Tajima's D
0.170769
CLR
0.96694
CSRT
0.421078946052697
Interpretation
Uncertain
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