Gene

KWMTBOMO06108  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001731

Annotation

PREDICTED:_CDKN2A-interacting_protein-like_[Papilio_machaon]

Location

Bomo_Chr11(+):545005-546869      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.047

CDS

ATGAAACCTTCTATAGACGTAGATTCGTTGAGAACGGAGCACGAATCTGAGGAACAGTGGGAAGTTAGACGTAGTTTCCTTTTAGAACACAAAGACGATTTTCCAGAAGCTGAATTAGTGACACTGGCGCAAATCTATACCAATATCGAATTTTTAGGATGCAGATATCCACCTCAAACAATGAAACGCATTTCGGTATTGGCCGAGAAAGTGTCCGCCAAGTACAAGGAGAGCAGAAAGAATAAGTTGAAACGAACTTTCGTGCAAGCCAGCGATGCGGCCGAGCAAAAAGCTAAACGTACCTTCAAGAAATAG

Protein

MKPSIDVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK

Uniprot

H9IWU8   S4P431   A0A2W1BIU8   A0A0N0PCH8   A0A212F2S8   A0A2A4JTZ6   + More
A0A2H1VNE1   I4DPB7   A0A0L7LP85   A0A1E1WK47   A0A1E1WUN2   A0A1E1WMU5   A0A1E1WVE5   A0A3S2NB42   A0A067QWE1   A0A2J7PZY6   A0A1B0DCU5   V9I9G1   A0A0L7QUE0   A0A3R7PTP9   A0A154PRB4   A0A088A109   A0A2S2Q9W2   A0A2A4JSZ1   A0A182YDW3   A0A1B6JU41   A0A034WSR3   B4QYI8   B3P0V4   B4HM27   B4PS44   Q9VF83   B3MSU5   A0A1Q3FBP5   A0A1B0CJ31   A0A2M4AWU0   E2BVT2   B4M5Z9   A0A1W4VGB0   U5EQB1   E9J4R2   B4KAQ5   A0A226DBV3   A0A0R3NKS7   B4GNU4   Q29BE6   A0A151II79   W8C2V1   A0A0L0CJJ1   B4JU46   A0A1B6H1D1   A0A2M3ZJL1   A0A1J1I3N5   A0A0A1WSM1   A0A3L8D3A2   A0A232FAC7   A0A0M5J0C3   K7JAE8   B0WFV5   A0A0P4W2U1   E2AX34   A0A182FLX1   A0A2M4C4D0   A0A023ECV5   A0A023ECU1   A0A0K8V390   A0A034WR47   A0A3B0K537   W5JER4   F4X4R9   A0A1Q3F5S3   A0A151HY18   A0A158NWB8   A0A1Q3F4D7   A0A195ET28   A0A151WX27   A0A2H1WHM0   N6UEI5   A0A182GMR1   A0A1E1WJ10   A0A2M4BQQ2   E0VTP8   A0A2H8TEP5   C4WVP8   A0A1B6J0J5   U4UB57   A0A2S2NV77   A0A336LIR6   A0A194PSR3   A0A0P4W4W5   A0A3R7QPM8   A0A1Z1MZS7   B0WCX1   A0A1S4FJE6   Q16YV8   A0A2S2Q2W6   A0A1W4X0D5   V5I6B8   A0A3R7SVA4   A0A1B0AL29  

Pubmed

19121390    23622113    28756777    26354079    22118469    22651552    + More
26227816    24845553    25244985    25348373    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20798317    21282665    15632085    24495485    26108605    25830018    30249741    28648823    20075255    24945155    20920257    23761445    21719571    21347285    23537049    26483478    20566863    28564581    17510324   

EMBL

BABH01020978    GAIX01009222    JAA83338.1    KZ150158    PZC72756.1    KQ460546    + More
KPJ14054.1    AGBW02010691    OWR48032.1    NWSH01000615    PCG75289.1    ODYU01003490    SOQ42355.1    AK403516    KQ458725    BAM19757.1    KPJ05359.1    JTDY01000440    KOB77159.1    GDQN01003671    JAT87383.1    GDQN01000324    JAT90730.1    GDQN01002786    JAT88268.1    GDQN01000110    JAT90944.1    RSAL01000131    RVE46407.1    KK852869    KDR14653.1    NEVH01020330    PNF21896.1    AJVK01031385    JR037382    JR037384    AEY57747.1    AEY57748.1    KQ414735    KOC62277.1    QCYY01001609    ROT76786.1    KQ435078    KZC14465.1    GGMS01005325    MBY74528.1    NWSH01000684    PCG74808.1    GECU01004979    JAT02728.1    GAKP01002139    JAC56813.1    CM000364    EDX12833.1    CH954181    EDV49002.1    CH480815    EDW42064.1    CM000160    EDW97464.1    AE014297    AY051823    AAF55177.2    AAK93247.1    CH902623    EDV30335.1    GFDL01010127    JAV24918.1    AJWK01013988    GGFK01011851    MBW45172.1    GL450957    EFN80210.1    CH940652    EDW59075.2    GANO01004372    JAB55499.1    GL768112    EFZ12188.1    CH933806    EDW16792.1    LNIX01000025    OXA42610.1    CM000070    KRS99746.1    CH479186    EDW38827.1    EAL27052.2    KQ977505    KYN02266.1    GAMC01006374    JAC00182.1    JRES01000310    KNC32410.1    CH916374    EDV91016.1    GECZ01001277    JAS68492.1    GGFM01007960    MBW28711.1    CVRI01000040    CRK94951.1    GBXI01012646    JAD01646.1    QOIP01000014    RLU14982.1    NNAY01000604    OXU27430.1    CP012526    ALC47486.1    AAZX01006898    DS231921    EDS26490.1    GDRN01089471    JAI60654.1    GL443520    EFN61984.1    GGFJ01011046    MBW60187.1    GAPW01006398    GAPW01006397    GAPW01006396    GAPW01006394    GAPW01006393    JAC07202.1    GAPW01006395    JAC07203.1    GDHF01019056    GDHF01011369    JAI33258.1    JAI40945.1    GAKP01002140    JAC56812.1    OUUW01000005    SPP80736.1    ADMH02001606    ETN61833.1    GL888679    EGI58492.1    GFDL01012131    JAV22914.1    KQ976730    KYM76461.1    ADTU01027870    GFDL01012652    JAV22393.1    KQ981993    KYN31067.1    KQ982669    KYQ52464.1    ODYU01008721    SOQ52565.1    APGK01025445    APGK01025446    KB740591    ENN80150.1    JXUM01075013    KQ562863    KXJ74982.1    GDQN01004080    JAT86974.1    GGFJ01006193    MBW55334.1    DS235769    EEB16754.1    GFXV01000772    MBW12577.1    ABLF02013593    AK341614    BAH71968.1    GECU01015001    JAS92705.1    KB632226    ERL90292.1    GGMR01008333    MBY20952.1    UFQT01000015    SSX17730.1    KQ459593    KPI96471.1    GDRN01089472    JAI60653.1    QCYY01000160    ROT85874.1    KY864366    ARW71688.1    DS231891    EDS43931.1    CH477508    EAT39803.1    GGMS01002872    MBY72075.1    GALX01008460    JAB60006.1    ROT76788.1    JXJN01029743   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000053268    UP000037510    + More
UP000283053    UP000027135    UP000235965    UP000092462    UP000053825    UP000283509    UP000076502    UP000005203    UP000076408    UP000000304    UP000008711    UP000001292    UP000002282    UP000000803    UP000007801    UP000092461    UP000008237    UP000008792    UP000192221    UP000009192    UP000198287    UP000001819    UP000008744    UP000078542    UP000037069    UP000001070    UP000183832    UP000279307    UP000215335    UP000092553    UP000002358    UP000002320    UP000000311    UP000069272    UP000268350    UP000000673    UP000007755    UP000078540    UP000005205    UP000078541    UP000075809    UP000019118    UP000069940    UP000249989    UP000009046    UP000007819    UP000030742    UP000008820    UP000192223    UP000092460   

PRIDE

H9IWU8    Q9VF83   

Pfam

PF11952   XTBD        + More
PF01424   R3H
PF01585   G-patch
PF00035   dsrm
PF00096   zf-C2H2

Interpro

IPR021859   XTBD        + More
IPR036867   R3H_dom_sf       
IPR001374   R3H_dom       
IPR000467   G_patch_dom       
IPR034071   R3H_NRF       
IPR014720   dsRBD_dom       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF82708   SSF82708        + More
SSF57667   SSF57667       

Gene 3D

3.30.1370.50    

CDD

cd02640  R3H_NRF
cd00048  DSRM

ProteinModelPortal

H9IWU8   S4P431   A0A2W1BIU8   A0A0N0PCH8   A0A212F2S8   A0A2A4JTZ6   + More
A0A2H1VNE1   I4DPB7   A0A0L7LP85   A0A1E1WK47   A0A1E1WUN2   A0A1E1WMU5   A0A1E1WVE5   A0A3S2NB42   A0A067QWE1   A0A2J7PZY6   A0A1B0DCU5   V9I9G1   A0A0L7QUE0   A0A3R7PTP9   A0A154PRB4   A0A088A109   A0A2S2Q9W2   A0A2A4JSZ1   A0A182YDW3   A0A1B6JU41   A0A034WSR3   B4QYI8   B3P0V4   B4HM27   B4PS44   Q9VF83   B3MSU5   A0A1Q3FBP5   A0A1B0CJ31   A0A2M4AWU0   E2BVT2   B4M5Z9   A0A1W4VGB0   U5EQB1   E9J4R2   B4KAQ5   A0A226DBV3   A0A0R3NKS7   B4GNU4   Q29BE6   A0A151II79   W8C2V1   A0A0L0CJJ1   B4JU46   A0A1B6H1D1   A0A2M3ZJL1   A0A1J1I3N5   A0A0A1WSM1   A0A3L8D3A2   A0A232FAC7   A0A0M5J0C3   K7JAE8   B0WFV5   A0A0P4W2U1   E2AX34   A0A182FLX1   A0A2M4C4D0   A0A023ECV5   A0A023ECU1   A0A0K8V390   A0A034WR47   A0A3B0K537   W5JER4   F4X4R9   A0A1Q3F5S3   A0A151HY18   A0A158NWB8   A0A1Q3F4D7   A0A195ET28   A0A151WX27   A0A2H1WHM0   N6UEI5   A0A182GMR1   A0A1E1WJ10   A0A2M4BQQ2   E0VTP8   A0A2H8TEP5   C4WVP8   A0A1B6J0J5   U4UB57   A0A2S2NV77   A0A336LIR6   A0A194PSR3   A0A0P4W4W5   A0A3R7QPM8   A0A1Z1MZS7   B0WCX1   A0A1S4FJE6   Q16YV8   A0A2S2Q2W6   A0A1W4X0D5   V5I6B8   A0A3R7SVA4   A0A1B0AL29  

PDB

5FIR     E-value=3.00683e-10,     Score=149

KEGG

101741651    no KO assigned | (RefSeq) CDKN2A-interacting protein-like

GO

GO:0003676   GO:0003723   GO:0005634   GO:0003700   GO:0008270  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10808

Exp number, first 60 AAs:

0.10808

Total prob of N-in:

0.30473

outside

1  -  104

 

 

Pi

160.667639

Theta

78.105336

Tajima's D

2.084796

CLR

15.519634

CSRT

0.896555172241388

Interpretation

Uncertain