SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06096
Pre Gene Modal
BGIBMGA001724
Annotation
PREDICTED:_vegetative_cell_wall_protein_gp1-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.244 PlasmaMembrane   Reliability : 1.501
 

Sequence

CDS
ATGGTCGTAGATCGTCTGCAGCAGATCGGCTTCCAGAAGTTCAGAGTGCCAGGAGGAACTTTCTTCATAACCTCATCTCCAGATATAATACTCCAGCCAGCCCCGATCGTCGTGTATCCAGCGCAGCAATCTCCAATAACGCCCCCGCAAATAACCGTTCAGCCACCCTCGATAGCTCCAATCACGCCCCCGGCTATAGTAGTCAGGCCACCCTCCCTAGCACCGATAACACCGCCCCCCGTGCTGGCCAGACCGAAACCTTTAGCCCCTATAAATCCCCCAGCTATCGTGGTACGACCCCCCAAGCCGGCACCCATATGTCCCCCTCCTATAACGATAACGCAGCAGAAACCTTGCCCCATCACCCCTCCAGAGATCATTATTAGGCAACCCAAGTATCCCATGATGCAGATACCACCGATTCAAATACCCGCCGGAATATTTCGAAGGGCTAACCCTTGTGGGAGCCCCTGCAATCCCTGCAACCCTTGCAACCCCTGCGCTACTTGCAGCTACTCCTGTCAGTCCTAA
Protein
MVVDRLQQIGFQKFRVPGGTFFITSSPDIILQPAPIVVYPAQQSPITPPQITVQPPSIAPITPPAIVVRPPSLAPITPPPVLARPKPLAPINPPAIVVRPPKPAPICPPPITITQQKPCPITPPEIIIRQPKYPMMQIPPIQIPAGIFRRANPCGSPCNPCNPCNPCATCSYSCQS

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
176
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0880599999999999
Exp number, first 60 AAs:
0.08793
Total prob of N-in:
0.12701
outside
1  -  176
 
 

Population Genetic Test Statistics

Pi
224.538577
Theta
181.339638
Tajima's D
0.866183
CLR
0.097471
CSRT
0.622818859057047
Interpretation
Uncertain
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