Gene

KWMTBOMO06094

Pre Gene Modal

BGIBMGA001703

Annotation

PREDICTED:_lachesin-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(-):259386-317054      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.779 PlasmaMembrane   Reliability : 1.234

CDS

ATGGAGGCAGGTTGGCTGGTGGTGGTGGCGCTCTTCGTCGCTGCGAGCGCTCAGAACAATCGCAATGATGGACCACGGTTTCTGTCGAGAGGCCACTCGTTTAGGACTGTGGTTGGAGACACGCTGCTTCTTCCCTGCCAAGTCCAGAACCTTGGATCTCTGGTACTGCTGTGGAGGCGAGGCCCTGCAGTGCTCACGGCTGCGAGTCTGATGGTCACGCGAGATGAAAGGTTTCGTCTGGTCGATGGTTACAATCTTCAGATAACCGATGTCGGGCCTCAGGACGCAGGCGACTACGTTTGCCAGATATCTGATCGAGTGGCTAGGGACCAGGTGCACACTGTGGAAGTATTGGTGCCACCGAGCGTCAGAGCCTCTCCGGAGACGAGACACGTGACGGCCAGACGTGGAGGAGCTGCCGTGCTGGAGTGCCGAGCAGCTGGGAACCCTGTACCAACCGTCACGTGGCATCGATTGCTTTTCTACCAGAACGACAGCAGCTCTCGTCTCGGCGAGGGCCCGCAGCTGCAGCTCTCCCGCCTGGAGCGGCACCACGGTGGGGTCTACGCGTGCACCGTGGACAACGGCGTCGGGCCACCGGTGGTCACAGAGTTCCAGCTGCAAGTGCTGTATCCTCCAGAGATAACGGTGGAGAGATCCTGGGTTCACACTGGCGAGGGGTTCCGGGCTGAATTAGTGTGCACGGTTCTAGCCGACCCGCCCGCTGAGGTTTCTTGGTACCAGAATTCTTTTCCGCTGAGCGCTTCCGAACGCGTGACGATGTCGGCCCGAGGGAGCAACCACACTTTACTAATAGCTGATGTGCAACCCGAAGACTTCGGGAACTACAGCTGCGTGGCAGACAACAGTCTGGGTCGCGCTCGTCGTCACGTGGAGGTGTCGGGGCGGCCAGGCCCCGCACGCTTCACGTCGCCGCCGCTGGCCCGCGCGCCCCACTCCTACACGCTCAGCTTCGCCGTCGACAGCTACCCACCCCTTGATGAGTTGAGGCTACTTTACCGTCAGCTGGCCATAAACGAGTCGTTTCAACAACCAGGACGTTGGCACGACGTCGTCCTGGCGGCGCCGGCTGCCAAGGGATCATTGACGCACAGAGTCTCGCACGAGCTGCGCGGACTGCAACCCGCTGCCGTGTACGAGGCTATCGTGCAGGCGAAGAACAGATACGGGTGGAACGAGGTCAGCGACATATTCCAGTTCCACACTCTCGGCGGGCCCCACACGGCTCATGCAGACGAACTGACCCCGATGTTCTCCGCGGCGCCCGAGCCGCGACTGACCCAAAGTTTGAGTGTACTAGTCATATATACGTGTTACTGGCTGGCGTTCAGCCAATGA

Protein

MEAGWLVVVALFVAASAQNNRNDGPRFLSRGHSFRTVVGDTLLLPCQVQNLGSLVLLWRRGPAVLTAASLMVTRDERFRLVDGYNLQITDVGPQDAGDYVCQISDRVARDQVHTVEVLVPPSVRASPETRHVTARRGGAAVLECRAAGNPVPTVTWHRLLFYQNDSSSRLGEGPQLQLSRLERHHGGVYACTVDNGVGPPVVTEFQLQVLYPPEITVERSWVHTGEGFRAELVCTVLADPPAEVSWYQNSFPLSASERVTMSARGSNHTLLIADVQPEDFGNYSCVADNSLGRARRHVEVSGRPGPARFTSPPLARAPHSYTLSFAVDSYPPLDELRLLYRQLAINESFQQPGRWHDVVLAAPAAKGSLTHRVSHELRGLQPAAVYEAIVQAKNRYGWNEVSDIFQFHTLGGPHTAHADELTPMFSAAPEPRLTQSLSVLVIYTCYWLAFSQ

Uniprot

H9IWS0   A0A2H1VEA2   A0A3S2THS6   A0A212EYB7   A0A0N0PAL8   A0A0N1PJJ8   + More
A0A2A4J2I3   A0A1S4EV00   B3LZA7   A0A1W4V8R7   B5DVY9   A0A3B0KBG7   A0A1J1HKM1   B4MB60   B4HEV3   B4R0S5   B4N9N3   Q9VCT4   A0A1B0FIK5   A0A1I8MLR2   A0A0A1X6P4   B4PMG7   B4KBD4   A0A0K8V7U5   B3P8I2   A0A1I8P5A6   W8AYC2   A0A0A9Z726   A0A0A9XXI1   A0A146LWL4   A0A1B6E7S8   Q7QBV2   P91670   Q7PSS8   A0A182Q1D4   A0A182HFW7   A0A084VGQ6   A0A336LMJ5   Q17NY0   Q7PSN2   A0A1Y9GKE3   A0A2C9GPP9   A0A1S4GEL5   A0A2C9GG51   A0A182YEC6   A0A182VFZ4   A0A182QXR3   A0A084VGS2   A0A182YEC4   A0A067RCB3   A0A182RYV8   B4MXP8   B4PDJ5   Q9VP08   A0A0J9RZL7   B3NEC1   A0A0R1E7D7   W8ASG8   A0A1J1HMF9   A0A1A9V303   A0A1B0FKK6   B3M6G5   A0A182WDE8   A0A0A1XJ55   A0A0L0BQH5   A0A3B0JZ64   A0A182U561   A0A1A9YL21   A0A1B0AR96   A0A1A9ZFZ2   A0A1I8PYR5   W5JXB6   A0A182X5I8   A0A1W4UT60   A0A182MPI2   B4LFN8   A0A0Q9WRQ9   A0A182PTK8   A0A0Q9XM42   B4KXQ7   A0A182FVU4   B4QK75   B4IAT1   A0A0M4EI05   B4J1S0   A0A0R3P897   A0A1B6KC14   A0A1J1HSR6   A0A1B6DIL5   A0A1A9WBQ4   A0A1J1J0I8   E0VBU6   A0A2C9H8B9   A0A0K8SXF0   A0A0K8SXI3   A0A0K8SX69   A0A1B6DCG8   A0A0K8SXE7   A0A0K8SYA9  

Pubmed

19121390    22118469    26354079    17994087    15632085    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    25830018    17550304    24495485    25401762    26823975    12364791    9043060    24438588    17510324    25244985    24845553    22936249    26108605    20920257    23761445    20566863   

EMBL

BABH01020960    BABH01020961    ODYU01001894    SOQ38742.1    RSAL01000131    RVE46400.1    + More
AGBW02011559    OWR46488.1    KQ458725    KPJ05378.1    KQ460140    KPJ17515.1    NWSH01003941    PCG65650.1    CH902617    EDV43034.2    CM000070    EDY67706.2    OUUW01000007    SPP83016.1    CVRI01000009    CRK88608.1    CH940656    EDW58331.2    CH480815    EDW43264.1    CM000364    EDX13998.1    CH964232    EDW80598.2    AE014297    AY060363    AAF56071.1    AAL25402.1    CCAG010005679    CCAG010005680    GBXI01007711    JAD06581.1    CM000160    EDW98072.2    CH933806    EDW16862.2    GDHF01017373    JAI34941.1    CH954182    EDV54077.1    GAMC01016705    GAMC01016704    GAMC01016703    GAMC01016702    JAB89853.1    GBHO01003340    JAG40264.1    GBHO01020031    JAG23573.1    GDHC01007070    JAQ11559.1    GEDC01003318    JAS33980.1    AAAB01008859    EAA07686.4    U78177    AAB36950.1    AAAB01008816    EAA05088.5    AXCN02001720    AXCN02001721    APCN01005430    APCN01005431    ATLV01013052    ATLV01013053    ATLV01013054    KE524837    KFB37150.1    UFQT01000020    SSX17873.1    CH477195    EAT48419.1    EAA05311.5    APCN01005433    APCN01000497    APCN01000498    APCN01000499    APCN01000500    APCN01000501    APCN01000502    AXCN02001718    AXCN02001719    ATLV01013072    ATLV01013073    KFB37166.1    KK852797    KDR16373.1    CH963876    EDW76817.2    CM000159    CH891692    EDW94994.2    KRK05177.1    AE014296    BT029930    AAF51754.3    ABM92804.1    CM002912    KMZ01059.1    CH954178    EDV52685.2    KRK05176.1    GAMC01019027    GAMC01019026    JAB87528.1    CVRI01000011    CRK89239.1    CCAG010023454    CH902618    EDV40814.1    GBXI01003372    JAD10920.1    JRES01001623    KNC21464.1    OUUW01000012    SPP87367.1    JXJN01002295    ADMH02000026    ETN68054.1    AXCM01008954    CH940647    EDW70356.2    KRF84871.1    CH933809    KRG06810.1    EDW19764.2    CM000363    EDX11412.1    CH480826    EDW44394.1    CP012525    ALC44302.1    CH916366    EDV98000.1    CH379070    KRT08479.1    GEBQ01031243    JAT08734.1    CRK89241.1    GEDC01011762    JAS25536.1    CVRI01000065    CRL05848.1    DS235042    EEB10852.1    GBRD01007922    GDHC01012121    JAG57899.1    JAQ06508.1    GBRD01007925    JAG57896.1    GBRD01007924    JAG57897.1    GEDC01013966    JAS23332.1    GBRD01007927    GDHC01018818    JAG57894.1    JAP99810.1    GBRD01007926    JAG57895.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000007801    UP000192221    UP000001819    UP000268350    UP000183832    UP000008792    UP000001292    UP000000304    UP000007798    UP000000803    UP000092444    UP000095301    UP000002282    UP000009192    UP000008711    UP000095300    UP000007062    UP000075886    UP000075840    UP000030765    UP000008820    UP000076408    UP000075903    UP000027135    UP000075900    UP000078200    UP000075920    UP000037069    UP000075902    UP000092443    UP000092460    UP000092445    UP000000673    UP000076407    UP000075883    UP000075885    UP000069272    UP000092553    UP000001070    UP000091820    UP000009046   

PRIDE

H9IWS0    Q9VCT4    P91670    Q9VP08   

Pfam

PF07679   I-set        + More
PF00082   Peptidase_S8

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR036116   FN3_sf       
IPR013098   Ig_I-set       
IPR003961   FN3_dom       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013106   Ig_V-set       
IPR036852   Peptidase_S8/S53_dom_sf       
IPR023828   Peptidase_S8_Ser-AS       
IPR000209   Peptidase_S8/S53_dom       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       
SSF52743   SSF52743       

Gene 3D

2.60.40.10     3.40.50.200    

CDD

cd00063  FN3

ProteinModelPortal

H9IWS0   A0A2H1VEA2   A0A3S2THS6   A0A212EYB7   A0A0N0PAL8   A0A0N1PJJ8   + More
A0A2A4J2I3   A0A1S4EV00   B3LZA7   A0A1W4V8R7   B5DVY9   A0A3B0KBG7   A0A1J1HKM1   B4MB60   B4HEV3   B4R0S5   B4N9N3   Q9VCT4   A0A1B0FIK5   A0A1I8MLR2   A0A0A1X6P4   B4PMG7   B4KBD4   A0A0K8V7U5   B3P8I2   A0A1I8P5A6   W8AYC2   A0A0A9Z726   A0A0A9XXI1   A0A146LWL4   A0A1B6E7S8   Q7QBV2   P91670   Q7PSS8   A0A182Q1D4   A0A182HFW7   A0A084VGQ6   A0A336LMJ5   Q17NY0   Q7PSN2   A0A1Y9GKE3   A0A2C9GPP9   A0A1S4GEL5   A0A2C9GG51   A0A182YEC6   A0A182VFZ4   A0A182QXR3   A0A084VGS2   A0A182YEC4   A0A067RCB3   A0A182RYV8   B4MXP8   B4PDJ5   Q9VP08   A0A0J9RZL7   B3NEC1   A0A0R1E7D7   W8ASG8   A0A1J1HMF9   A0A1A9V303   A0A1B0FKK6   B3M6G5   A0A182WDE8   A0A0A1XJ55   A0A0L0BQH5   A0A3B0JZ64   A0A182U561   A0A1A9YL21   A0A1B0AR96   A0A1A9ZFZ2   A0A1I8PYR5   W5JXB6   A0A182X5I8   A0A1W4UT60   A0A182MPI2   B4LFN8   A0A0Q9WRQ9   A0A182PTK8   A0A0Q9XM42   B4KXQ7   A0A182FVU4   B4QK75   B4IAT1   A0A0M4EI05   B4J1S0   A0A0R3P897   A0A1B6KC14   A0A1J1HSR6   A0A1B6DIL5   A0A1A9WBQ4   A0A1J1J0I8   E0VBU6   A0A2C9H8B9   A0A0K8SXF0   A0A0K8SXI3   A0A0K8SX69   A0A1B6DCG8   A0A0K8SXE7   A0A0K8SYA9  

PDB

6EG1     E-value=1.39246e-28,     Score=315

KEGG

101736386    no KO assigned | (RefSeq) lachesin-like

GO

GO:0007465   GO:0007156   GO:0007616   GO:0048149   GO:0019897   GO:0045466   GO:0016021   GO:0008046   GO:0030424   GO:0005886   GO:0050808   GO:0043025   GO:0004252   GO:0005515   GO:0046872   GO:0005634   GO:0008270   GO:0003924   GO:0016020   GO:0003677   GO:0000723   GO:0006260  

SignalP

Position:   1 - 17,         Likelihood:  0.976504

 

 

Length:

452

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.75967

Exp number, first 60 AAs:

0.25394

Total prob of N-in:

0.01581

outside

1  -  452

 

 

Pi

219.895037

Theta

161.384449

Tajima's D

1.30798

CLR

0.362755

CSRT

0.744612769361532

Interpretation

Uncertain