SGID The Silkworm Genome Information Database
Gene
KWMTBOMO06081
Pre Gene Modal
BGIBMGA001709
Annotation
PREDICTED:_uncharacterized_protein_LOC101739152_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.085
 

Sequence

CDS
ATGTCAGTAGGCGTTCCACTGCATCGAAGGAGTCTTGGGGCCAGCAGTGACACCAGCTATTGTGAACGCGACACTTGGGATGACTGGGAGAGCAGATCTTCACTTAGTCAAGTTGAAGAGTTGGTAGTTTGGGAAAGGCCACAGTCAAATGTGTTTAGGAAACGAAATTTAACAAGCCAAGGCGGGGAGCTCTCACGCTCCACCGCATATTACTATGGAGACCTGGAGAAGCTCAAAAGGCAGAAACCACTCGAGGATGTACCGGAACAGCGTCAAGAGACAAGCGAAATCTGCGAGATTGTTCCCCAGCGGAATGTCATGGAAGCCCCGAGGCTGGTCGAAGTGGGTCGGCAATGGAGTCTACCGGAATACACTACGCCGGAAAGTTCGAGAAAAATCGAGGAGACCTACTCAACAGCTGGCACCTTTCCGATGCCGGAGCCCAAAGAGAAGGAGCCTCTTCTAGCCGAGTTAGAAGTAGTAGGAAGACTCCCGTTGACGCAACTGGAAAGCAGTTCGGTCGTCAGACGCAGCAGGAGTTGGTATCTTTGCTGCCCTAACGTCGGTGATGAGGAGATCTCTAGAGAATCCTCCTGGAGGTACTCCAGTCTTCGGCCGGTTACTGCAGCACCGATTCCCGGTCAAAACGGTTTGATGGTGGCAACACAGAGCACGGCAAGAGATGACGTGACGGCTCTGAAAGCAGAAAGAGACGCCCTCGCCAGAGCATTGGCGGCGGAAAGACAACGTGCGGCCACCGCGGCCCGAGCTCACGATGCAAGGCTGGCTGAACTACACGGGGTCATAGCTGAACTGGTGCGCAGGAGAGCCGATAAACAGGCCAGAGCGATACCAGAAGAGGATGGCTCAGACGAGTGCGAGTCGACCACGCAGCCGGCGGAGGAGCTGGACAACGACGCGGATCCGTCCAGGACCGAGCAGAACGACACCTCCTCGTTGGCGAGTCCAGCCGAGCTCCCGGCGCCGCGGGGACCGACCGCCGGGGACGCGCCTGATGACGCGACCGACGCGAGCGGAGACGACCACAGCAGGCCGTGCAACCCGACGATAGAGGTGACGTCATCGCAGCAGGTCACGGACTGCGACACCAGTCTGAACCTCTCCGAGAGGGACTCCGAGCTGTGTCTGACCACGGCCAGGTGCTGCCGGGCGGCGCGCCAGCCCCGGAGCGCCGGCGACAGCTGCGAGCGGCAGCGCGGCTCCCCGGCCTCGCGCGGTCGATCGGAGACGAGACGAGCCAAGCTGGCCTCGCGCGTCCGGCTGCGGACGGCGGACTCGCGCGACCCCAGCACGGACGAGGCGTGGTCGCTGGAGGCGGAGCGGCTGGCGCAGGACGTGTGCGCGCAGGCCGACCTCCGGGAGGCGCTCGTCGCGGCCGGCAACGACGGCGAAGCTCTGTCCGCCAGCGTGGAAGCCTTAAAAGCTCACTGCCGCAAGCTGGAGGCGGACAACGCTGTGACCCAGGCGGCGCTGGAGCAGGCCACCGACGTGGTGCACAGGCTGTACACGTTCTGCAGCGTGCAGGAGTCCTGGGTAGTGCAGCTGTGCGCGGCGCTGCGGGCCGCCGACCGCACCGTGGAGGCCTACGACGTGCTGCTGGCGCTGGCCGAGACCGAGCGCCGCGCCGCGCCACACCAGCGCGAGGCGGCGGAGCTGGTGGCGAGGCAGCTGCTGGCGCGACTCGACGCGGAGCAGCGGTGCGCCACGATCGGGGAGCCCTTACTGTCGCCGGGGCCGTGGTTGGAACACGATAACAATGCGGAGGCGGGCGGCGCGTGGGGGGGCCAGCAGGAGGCGTCCCTCCGCCGCCACGTGGCCGCGCTCAAGAGCTCCGCCGCCGCCCTCCGGGACTGCCGCCCCGCGCTCTACTCCCAGCACGACGGCGCCGAGGAGCTGTCCGGGGGCGCGGCGGACTACAGGCTGATGCAGATGGAGGCCGCCATCGTGCTGCAGGAGTCCGCGCAGTTGAAGGAGCGCGTGGACAGCAGCAGGCTGTGCGAGGGGGCCGCCCCGCGCCCGCCGCCGGACGCGCGCCGCGTCAGTGATGCGATTGACAAAAGGAATCTCGAATCCAAGGGCCTACGGTCGGATGTCCGCGCCTCCAATGTCGCTAATAATTATTCGTTCTGA
Protein
MSVGVPLHRRSLGASSDTSYCERDTWDDWESRSSLSQVEELVVWERPQSNVFRKRNLTSQGGELSRSTAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVMEAPRLVEVGRQWSLPEYTTPESSRKIEETYSTAGTFPMPEPKEKEPLLAELEVVGRLPLTQLESSSVVRRSRSWYLCCPNVGDEEISRESSWRYSSLRPVTAAPIPGQNGLMVATQSTARDDVTALKAERDALARALAAERQRAATAARAHDARLAELHGVIAELVRRRADKQARAIPEEDGSDECESTTQPAEELDNDADPSRTEQNDTSSLASPAELPAPRGPTAGDAPDDATDASGDDHSRPCNPTIEVTSSQQVTDCDTSLNLSERDSELCLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDGEALSASVEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVVQLCAALRAADRTVEAYDVLLALAETERRAAPHQREAAELVARQLLARLDAEQRCATIGEPLLSPGPWLEHDNNAEAGGAWGGQQEASLRRHVAALKSSAAALRDCRPALYSQHDGAEELSGGAADYRLMQMEAAIVLQESAQLKERVDSSRLCEGAAPRPPPDARRVSDAIDKRNLESKGLRSDVRASNVANNYSF

Summary

Interpro
IPR040171   USBP1-like       

Ontologies

GO

Topology

Length:
716
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00011
outside
1  -  716
 
 

Population Genetic Test Statistics

Pi
175.522458
Theta
176.507848
Tajima's D
0.2451
CLR
0.289226
CSRT
0.437078146092695
Interpretation
Uncertain
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