Gene

KWMTBOMO06077

Pre Gene Modal

BGIBMGA001710

Annotation

RING_finger_and_WD_repeat_domain-containing_protein_3_[Operophtera_brumata]

Location

Bomo_Chr11(-):88402-92225      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.08

CDS

ATGAGCCAGTATCCCACCGCACAGAGCCAGGGCACAGAGTCACCGGGGAGTCCAAATATATTCGAAGAACCGGAGCAAAGCTTCGCAGCAGCAGAGAATGACAACCACATAGATCTGCCGTCGACTAGTCGAAGCCATGATCACGATCCCTCCGAGGGTCCGTTAGATGTGCCCAGCGATGAGCCCATACAAATAGACTTGGCCGGTCCCTTGAGGTACGACAACGATGACAGCAACGACACGGTGCTGAACATCATCATTAACGGACCAGGACACCTCCCGGCTCAGAGCGAGGACAGCAACCTCACTTCACCTCTCACCTCATTCAGCGATGAGAGCACGAGACAATCTATAAATGAAGATTCGAATAGTTGCGCTTCGATCAGATTGAACCCCAGGCCCCCTGATGACATCGAACCCCCAGCCAAACTCAGGAAGATGAACGAAGTCGAAGAGGTCGACGGCGAAACCTGCCCGATTTGCTTGGACTCGTGGGGTAACTCCGGTGACCACAGGCTAGTAGCACTGCGCTGCGGTCACCTTTTCGGTTCAGAGTGTGTGGAGCGCTGGCTGAAGGCTCAGAAACTAAAAGACAGAACGTGCCCGACCTGCAAGGGGAAGGCCAACTTGAAGGACCTGAGGTTCATATACGCGAGGCGCTTGGTAGCGGCGGACACTTCGCAAATTACGGCTCTACAAAAACAAGTTGAGATTCTTCAATCAGAGAAGAGCAGAACCGAACTGGAATTAGAAAAGATGAAGATAGCACATCGCGCTTGCGTGCAACAGCTCGAGGGCCTACGGAGCACCCTAATGAAGTCTCAATCTAACAAGGAGCAGCCTTCCAGGAAGTCCTGGAGGTTCGCCTTGGAGAAGAACCTTGAAATATGCAAGGACGGAGGCTGCAGAGTCCTGACCTACAACTGCCGGACCTACGAGTTGTATGTGTCCCAGAAGAGCGTCAACTATCTCTTCCCTGGATTCGGGATAAGGAAGATCAGCTGTGTCGACTACAAGCTGGGGCAGTTCGTCCATCTGCACCCGAAGCCGATCCGCGACATCACGTACTCCCAGCACCGGGACCTGCTGCTGAGCGTGGCCCTGGACAGCACGGCGCGGATAGTCGAGCGCGGCATCCTCAGCGTGACGGTGAACTCGGGCATGCCGCTCTGGTCCTGCTCTTGGGACAACTTGCGCAGCAACGAGTTCTACGTAGGCGGCGTCGGAGGCGTGATCCACCACTATGACGTCAGAAACCCTAGCACCTACTTACGGATGCTGAGCTCTCCGGGGGACCTGTCACCAGTTGTGTCTTTGTGTTCCACAGAATATGGTCTCTTGTCGTGCCAGTTGAACTCATCGAAGCTGTGGGCGGTGAACACAAGGCAGTGTGAGCCGAGGGTCTTGCCCGTGGAAGGATCGTTCATGTCTCTGGCCTATGATAACGCGTCCCAACGCGCCGTCATAGCGTCCAGACCGAGTTCGAATGGTCTAGAAAGATCTAAGTTGAGCGTCTGTAAATTGAAACCGAGCATACCGAACGGCGAAGTTATTTGTGACGTGGTAGAAACATTCTCGGGGTCGCTCAGGTCCTCGTTGATGTCCAAAGTGGCCTGGGTGAGGTTAGCGAGCTCTGCGTGGGTCGCCGCTCATTCTGAAAGCGATTCAGCGCTTTATTTGCACGGCGTCGACGGCACGCGGACCATGTCCCTGCCCGCGTCGGAGCCCGCGCTGGACGTGTGCTCGGTCGAGACGAACGGAAGCAATATACTGGCGGCTCTGTCAGAGTCCCGACTCAGGCTGTACAAGGCGGTCCCCACCAATACGTGA

Protein

MSQYPTAQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWRFALEKNLEICKDGGCRVLTYNCRTYELYVSQKSVNYLFPGFGIRKISCVDYKLGQFVHLHPKPIRDITYSQHRDLLLSVALDSTARIVERGILSVTVNSGMPLWSCSWDNLRSNEFYVGGVGGVIHHYDVRNPSTYLRMLSSPGDLSPVVSLCSTEYGLLSCQLNSSKLWAVNTRQCEPRVLPVEGSFMSLAYDNASQRAVIASRPSSNGLERSKLSVCKLKPSIPNGEVICDVVETFSGSLRSSLMSKVAWVRLASSAWVAAHSESDSALYLHGVDGTRTMSLPASEPALDVCSVETNGSNILAALSESRLRLYKAVPTNT

Similarity

Belongs to the ETS family.

Uniprot

H9IWS7   A0A0L7KWV4   A0A2W1BB00   A0A0N0PDK7   A0A0N1IND4   A0A212EZ31   + More
A0A2H1V6F4   A0A2H1WKV7   A0A2A4JTE8   A0A310SEG8   A0A2A3E5J5   A0A0L7QXR6   A0A154P978   A0A2J7PHJ6   A0A026VT89   A0A151I088   A0A158NTV4   E9J3I6   A0A151XHM9   A0A195FPJ3   A0A2P8YCL7   A0A151IY09   D6WGK2   E2B1Y6   A0A1B6C8C0   A0A1B6CLK0   A0A195CV36   F4WIZ5   A0A0C9QLA6   A0A0C9R085   A0A1Y1KC92   A0A1Y1MGB8   E2BGU0   A0A1W4XAH0   A0A1B6H4E4   A0A1W4UTT7   E0VT05   B4PKA1   A0A0A1WPU9   A0A1B0G7J3   A0A034VM25   A0A034VIP1   B3NDH8   A0A067QW56   B4QMY4   A0A1A9UP22   A0A1B6MDI2   A0A0K8V6C7   A0A1A9XQY8   Q9VV99   A0A1B0C2P5   B4HK64   A0A210QP82   B3M4E2   A0A182GAR0   A0A182GJ53   A0A1A9W4Z1   B4KXZ7   A0A1A9ZLX1   B4LG55   A0A182PHM1   A0A3Q0T1C0   A0A1I8NEF1   A0A1S3JEL8   A0A182KCC3   T1PL51   A0A182V3T5   A0A182TPC4   A0A182XMX2   A0A1Q3F222   A0A336LMF4   Q7Q6V9   W5JJY6   A0A182LJ45   A0A182HWS8   A0A0P5FWU8   A0A2T7PKL9   A0A0P5QQX6   A0A0P5DVL2   A0A0P5PGP4   A0A0P5HNM8   A0A0L8GIG3   Q16WF0   B0WNN9   A0A0P5L2R7   F6PW49   A0A1L8GF42   A0A0M3QWY0   A0A3B4GZK8   A0A3P9CGF6   A0A3P8NGG4   A0A3Q2WB63   A0A3B0JZS0   A0A1B0CB36   I3JXK7   W5L2S6  

Pubmed

19121390    26227816    28756777    26354079    22118469    24508170    + More
30249741    21347285    21282665    29403074    18362917    19820115    20798317    21719571    28004739    20566863    17994087    17550304    25830018    25348373    24845553    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28812685    26483478    25315136    12364791    14747013    17210077    20920257    23761445    20966253    17510324    20431018    27762356    25186727    25329095   

EMBL

BABH01020937    JTDY01004968    KOB67534.1    KZ150384    PZC71074.1    KQ460140    + More
KPJ17500.1    KQ458725    KPJ05393.1    AGBW02011377    OWR46755.1    ODYU01000921    SOQ36411.1    ODYU01009346    SOQ53711.1    NWSH01000694    PCG74743.1    KQ770168    OAD52685.1    KZ288380    PBC26526.1    KQ414699    KOC63410.1    KQ434846    KZC08391.1    NEVH01025136    PNF15802.1    KK108498    QOIP01000013    EZA46696.1    RLU15318.1    KQ976639    KYM78821.1    ADTU01026082    GL768066    EFZ12600.1    KQ982130    KYQ59857.1    KQ981382    KYN42368.1    PYGN01000703    PSN42001.1    KQ980780    KYN13203.1    KQ971321    EFA00575.2    GL445000    EFN60303.1    GEDC01027818    JAS09480.1    GEDC01022951    JAS14347.1    KQ977279    KYN04029.1    GL888181    EGI65765.1    GBYB01001382    JAG71149.1    GBYB01001380    JAG71147.1    GEZM01088692    JAV58011.1    GEZM01032371    GEZM01032370    JAV84631.1    GL448228    EFN85072.1    GECZ01000236    JAS69533.1    DS235759    EEB16511.1    CM000159    EDW94799.1    GBXI01013213    JAD01079.1    CCAG010022578    GAKP01015805    JAC43147.1    GAKP01015806    JAC43146.1    CH954178    EDV52040.1    KK853182    KDR10171.1    CM000363    CM002912    EDX10776.1    KMZ00105.1    GEBQ01006028    JAT33949.1    GDHF01017825    JAI34489.1    AE014296    AY071651    AAF49415.1    AAL49273.1    JXJN01024608    CH480815    EDW41805.1    NEDP02002573    OWF50554.1    CH902618    EDV40436.1    JXUM01051275    JXUM01051276    JXUM01051277    JXUM01051278    KQ561682    KXJ77812.1    JXUM01012577    JXUM01012578    JXUM01012579    JXUM01012580    KQ560357    KXJ82855.1    CH933809    EDW18699.1    CH940647    EDW69363.1    KA648845    AFP63474.1    GFDL01013497    JAV21548.1    UFQT01000016    SSX17809.1    AAAB01008960    EAA11257.2    ADMH02001299    ETN63094.1    APCN01001535    GDIQ01270754    JAJ80970.1    PZQS01000003    PVD33927.1    GDIQ01229693    GDIQ01132587    GDIQ01110785    JAL40941.1    GDIP01150142    LRGB01000568    JAJ73260.1    KZS18026.1    GDIQ01128741    JAL22985.1    GDIQ01226994    JAK24731.1    KQ421821    KOF76330.1    CH477568    EAT38912.1    DS232013    EDS31875.1    GDIQ01183161    JAK68564.1    AAMC01003481    AAMC01003482    CM004473    OCT82479.1    CP012525    ALC44909.1    OUUW01000012    SPP87554.1    AJWK01004787    AERX01003492    AERX01003493    AERX01003494   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000218220    + More
UP000242457    UP000053825    UP000076502    UP000235965    UP000053097    UP000279307    UP000078540    UP000005205    UP000075809    UP000078541    UP000245037    UP000078492    UP000007266    UP000000311    UP000078542    UP000007755    UP000008237    UP000192223    UP000192221    UP000009046    UP000002282    UP000092444    UP000008711    UP000027135    UP000000304    UP000078200    UP000092443    UP000000803    UP000092460    UP000001292    UP000242188    UP000007801    UP000069940    UP000249989    UP000091820    UP000009192    UP000092445    UP000008792    UP000075885    UP000261340    UP000095301    UP000085678    UP000075881    UP000075903    UP000075902    UP000076407    UP000007062    UP000000673    UP000075882    UP000075840    UP000245119    UP000076858    UP000053454    UP000008820    UP000002320    UP000008143    UP000186698    UP000092553    UP000261460    UP000265160    UP000265100    UP000264840    UP000268350    UP000092461    UP000005207    UP000018467   

PRIDE

H9IWS7    Q9VV99   

Pfam

PF13639   zf-RING_2        + More
PF00400   WD40
PF00178   Ets
PF00097   zf-C3HC4

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR037381   RFWD3       
IPR001841   Znf_RING       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR013083   Znf_RING/FYVE/PHD       
IPR001680   WD40_repeat       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR000418   Ets_dom       
IPR018957   Znf_C3HC4_RING-type       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF46785   SSF46785       

Gene 3D

2.130.10.10     3.30.40.10     1.10.10.10    

ProteinModelPortal

H9IWS7   A0A0L7KWV4   A0A2W1BB00   A0A0N0PDK7   A0A0N1IND4   A0A212EZ31   + More
A0A2H1V6F4   A0A2H1WKV7   A0A2A4JTE8   A0A310SEG8   A0A2A3E5J5   A0A0L7QXR6   A0A154P978   A0A2J7PHJ6   A0A026VT89   A0A151I088   A0A158NTV4   E9J3I6   A0A151XHM9   A0A195FPJ3   A0A2P8YCL7   A0A151IY09   D6WGK2   E2B1Y6   A0A1B6C8C0   A0A1B6CLK0   A0A195CV36   F4WIZ5   A0A0C9QLA6   A0A0C9R085   A0A1Y1KC92   A0A1Y1MGB8   E2BGU0   A0A1W4XAH0   A0A1B6H4E4   A0A1W4UTT7   E0VT05   B4PKA1   A0A0A1WPU9   A0A1B0G7J3   A0A034VM25   A0A034VIP1   B3NDH8   A0A067QW56   B4QMY4   A0A1A9UP22   A0A1B6MDI2   A0A0K8V6C7   A0A1A9XQY8   Q9VV99   A0A1B0C2P5   B4HK64   A0A210QP82   B3M4E2   A0A182GAR0   A0A182GJ53   A0A1A9W4Z1   B4KXZ7   A0A1A9ZLX1   B4LG55   A0A182PHM1   A0A3Q0T1C0   A0A1I8NEF1   A0A1S3JEL8   A0A182KCC3   T1PL51   A0A182V3T5   A0A182TPC4   A0A182XMX2   A0A1Q3F222   A0A336LMF4   Q7Q6V9   W5JJY6   A0A182LJ45   A0A182HWS8   A0A0P5FWU8   A0A2T7PKL9   A0A0P5QQX6   A0A0P5DVL2   A0A0P5PGP4   A0A0P5HNM8   A0A0L8GIG3   Q16WF0   B0WNN9   A0A0P5L2R7   F6PW49   A0A1L8GF42   A0A0M3QWY0   A0A3B4GZK8   A0A3P9CGF6   A0A3P8NGG4   A0A3Q2WB63   A0A3B0JZS0   A0A1B0CB36   I3JXK7   W5L2S6  

PDB

6CVZ     E-value=4.60246e-28,     Score=312

KEGG

101738917    K15691 E3 ubiquitin-protein ligase RFWD3 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RFWD3-

GO

GO:0036297   GO:0004842   GO:0005634   GO:0016874   GO:0008270   GO:0016567   GO:0046872   GO:0043565   GO:0003700   GO:0005515   GO:0004888   GO:0007166   GO:0016020   GO:0003677   GO:0000723   GO:0006260  

PANTHER

PTHR16047  

Subcellular location

Nucleus  

Length:

609

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00122

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00130

outside

1  -  609

 

 

Pi

192.274543

Theta

182.696753

Tajima's D

0.102365

CLR

0.623211

CSRT

0.3996800159992

Interpretation

Uncertain