SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06076  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001711
Annotation
hypothetical_protein_KGM_21315_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.703
 

Sequence

CDS
ATGGCGAACGTCGACCAGTTGCTGCAGCATGTTGCCCAGAATGTAGAGAGACAGATTGACAGTGAAATCGAAAGATTAGACGCTCTGGAAAGTGGGGATCTAGAGGCGATCAGACAACAACGCATAGCTGAAATGAAATTAAGAGCAAAGCAGAAACAAGAGTGGTTGGCCATTGGTCACGGAGAATACACAGAGATCGATGGAGAGAAAGAGTTCTTTGCCGTTTGCAATAAAAGTCAGAATGTCGTGTGCCATTTCTACAAGTCGGACTCGCCCCGCTGCAAGATCGTGGACATGCACCTCAAGATCTTGGCCAAGAAGCACATCGAGACGCGGTTCGTGAAGTTGGACGTGGAGAGAGCGCCGTTTCTGACCGGTCGGCTTAAAATACGCGTGATCCCAACACTAGGACTAGTGAAGGACAATAAGACTAAAGACTTCATAGTCGGTTTCACTGATCTCGGTAATAGGGACGACTTCTCAACGGATATACTGGAGTGGAGGATCGCCAGATCTGAAGCAATAGAGTATTCTGGTGATCTGTTGGTCCCTCCATCGGAAGCCAAGAAACAGAAATCCTTACACATTCAGAGCAAGAAGACTATCAGAGGCCGGGATGAGAGTGATTCTGACGACTTTAGCGATTAA
Protein
MANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDDFSD

Summary

EMBL
BABH01020937    AGBW02013343    OWR43559.1    NWSH01000694    PCG74744.1    ODYU01008522    + More
SOQ52196.1    AK402599    BAM19221.1    KQ458725    KPJ05394.1    RSAL01000357    RVE42223.1    AK401879    BAM18501.1    NNAY01004486    OXU17827.1    GANO01002369    JAB57502.1    GDRN01079563    GDRN01079562    JAI62379.1    AAAB01008820    EAA05402.2    APCN01002223    KK852482    KDR22880.1    AXCM01000231    AXCN02000090    IACF01000646    LAB66408.1    KA644603    AFP59232.1    GEBQ01003690    JAT36287.1    JXJN01009971    NEVH01004959    PNF39290.1    UFQS01000478    UFQT01000478    SSX04290.1    SSX24655.1    CCAG010022694    GEDC01028725    JAS08573.1    JRES01000310    KNC32452.1    EAAA01001437    CVRI01000048    CRK98580.1    GBXI01008821    JAD05471.1    CH954181    EDV49589.1    ATLV01006794    KE524385    KFB35302.1    SAUD01014488    RXG59837.1    CH933806    EDW15552.1    CM000070    EDY68072.1    CH479179    EDW24338.1    CM000364    EDX13439.1    CH480815    EDW42685.1    CH902623    EDV30293.1    CH379064    EDY73048.1    DS232219    EDS37784.1    GFDL01009917    JAV25128.1    CM000160    EDW96851.1    AE014297    AY060862    AY071254    AAF54565.1    AAL28410.1    AAL48876.1    CH478461    CH477665    EAT32950.1    EAT37536.1    GFDL01009847    JAV25198.1    JH431371    CH916374    EDV91359.1    BT077242    ACO11666.1    GDIP01056773    LRGB01000024    JAM46942.1    KZS21739.1    OUUW01000007    SPP82604.1    GGFJ01009274    MBW58415.1    GECZ01029709    GECZ01015577    JAS40060.1    JAS54192.1    CH964251    EDW83210.1    GEDV01005270    JAP83287.1    CH940650    EDW68359.1    ADMH02001657    ETN61537.1    GGFK01011639    MBW44960.1    GGFM01007793    MBW28544.1    BT078223    BT120687    BT121246    ACO12647.1    ADD24327.1    ADD38176.1    BT078704    ACO13128.1    CP012526    ALC46610.1    KQ982892    KYQ49597.1    GFAC01001067    JAT98121.1    JXUM01115351    GAPW01004225    KQ565871    JAC09373.1    KXJ70581.1    GFAA01001340    JAU02095.1    JO841072    AEO32689.1    GBBM01005435    JAC29983.1    GECU01019074    GECU01014076    JAS88632.1    JAS93630.1    BT078241    ACO12665.1    LBMM01005656    KMQ91328.1    GL732588    EFX73789.1    KQ980724    KYN14180.1    NHOQ01000293    PWA31551.1    LKEX01012869    KYN50190.1    ABLF02032260    AK340882    BAH71399.1   
Pfam
PF00085   Thioredoxin        + More
PF02114   Phosducin
Interpro
IPR013766   Thioredoxin_domain        + More
IPR036249   Thioredoxin-like_sf       
IPR024253   Phosducin_thioredoxin-like_dom       
SUPFAM
SSF52833   SSF52833       
PDB
2DBC     E-value=3.0566e-08,     Score=136

Ontologies

Topology

Length:
215
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00017
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06261
outside
1  -  215
 
 

Population Genetic Test Statistics

Pi
224.675851
Theta
175.277756
Tajima's D
1.174894
CLR
0.224639
CSRT
0.707314634268287
Interpretation
Uncertain
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