Silkworm Genome Informatics Database

Gene

KWMTBOMO06074

Pre Gene Modal

BGIBMGA001714

Annotation

PREDICTED:_ETS_translocation_variant_5_[Bombyx_mori]

Location

Bomo_Chr11(+):59106-62360 View in EpiBrowser

Transcription factor

ETS

Location in the cell

Nuclear Reliability : 3.065

CDS

ATGAGAAGCGTTTCTAAGAATCCTTACAGCAAGTTCATATTGTGCAAGAGTGACGGCGAGGAGACCAGGCTGGACTACAGAGATCAGTACCTACACAGATGCGGCATCCCGTTCAGTAAATGCAATGAGGACGAGGAGGCGAGGGAGGAGCCGGTCTCCAGCTCCGAGCCCCACCACCGCTGGGACGAGAAGCTAGTAAGCAGCTCGCTGTGTGCGACGCCGCTCGCCGTGTCGAGCCGGACCGACCCCGCCAGCCCGCAGCACGTCACCACTACACATTCAGGCGGGCGGCGCGGCTCGCTGCAGCTGTGGCAGTTCCTGGTGTCTCTGCTGGCGGAGGGCGCGCGCTGCGTGGCCTGGACCGGCCGCGGGCTCGAGTTCAAGCTGCACGAGCCGGAGGAGGTGGCGCGGCGCTGGGGCGCGCAGAAGAACCGGCCCGCCATGAACTACGACAAGCTGTCCCGCTCGCTGCGGTACTACTACGAGAAGGGGATCATGCAGAAAGTAGCAGGCGAGCGGTACGTGTACAAGTTCGTGTGCGACCCGGAGGCGCTGTTCAGCATGGCGGGGGGCCGGCTGCCGCCCCCCTACCCGCACCGCTACTACCACCCCCTCGACCAGCTGCCGCACTACGACGTCTAG

Protein

MRSVSKNPYSKFILCKSDGEETRLDYRDQYLHRCGIPFSKCNEDEEAREEPVSSSEPHHRWDEKLVSSSLCATPLAVSSRTDPASPQHVTTTHSGGRRGSLQLWQFLVSLLAEGARCVAWTGRGLEFKLHEPEEVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAGGRLPPPYPHRYYHPLDQLPHYDV

Similarity

Belongs to the ETS family.
Belongs to the peptidase S1 family.

Uniprot

A0A2H1VHX9 A0A2A4JI23 A0A0N1I5V5 A0A182K3V0 A0A182M1N5 A0A212CIU2 + More

Pubmed

26354079

EMBL

ODYU01002483 SOQ40022.1 NWSH01001401 PCG71368.1 KQ458725 KPJ05396.1 + More
AXCM01002237 MKHE01000019 OWK05911.1

Proteomes

UP000218220 UP000053268 UP000075881 UP000075883

Pfam

PF00178   Ets        + More
PF00089   Trypsin
PF04621   ETS_PEA3_N

Interpro

IPR000418   Ets_dom        + More
IPR036388   WH-like_DNA-bd_sf
IPR036390   WH_DNA-bd_sf
IPR018114   TRYPSIN_HIS
IPR001254   Trypsin_dom
IPR009003   Peptidase_S1_PA
IPR001314   Peptidase_S1A
IPR033116   TRYPSIN_SER
IPR006715   ETS_PEA3_N

SUPFAM

SSF46785 SSF46785 + More
SSF50494 SSF50494

Gene 3D

1.10.10.10

CDD

cd00190 Tryp_SPc

ProteinModelPortal

A0A2H1VHX9 A0A2A4JI23 A0A0N1I5V5 A0A182K3V0 A0A182M1N5 A0A212CIU2 + More

PDB

4UNO E-value=3.23071e-42, Score=429

KEGG

101735723 K15593 ets translocation variant 5 | (RefSeq) ETS translocation variant 5

GO

GO:0003700 GO:0005634 GO:0043565 GO:0004252 GO:0006355 GO:0004888 GO:0007166 GO:0016020 GO:0003677 GO:0000723 GO:0006260

Subcellular location

Nucleus

Length:

213

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04236

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14933

outside

1 - 213

Pi

316.729467

Theta

196.827549

Tajima's D

1.96401

CLR

0.553023

CSRT

0.879106044697765

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics