Gene

KWMTBOMO06068

Annotation

PREDICTED:_uncharacterized_protein_LOC106115416_[Papilio_xuthus]

Location

Bomo_Chr10(+):17511955-17513129      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.577

CDS

ATGTCATCAGTCCCAAAGATTTGTTCTGGATGTAAAAATAAACAAAGGAAGGAATACATGATATGCTCCGCATGTGGCTTAGGTTATGATTTGTTATGTGCTAATATAACACCTAAATCTTACTTTCTTATGGATCAAGACCGTAAGAATAACTGGAGTTGTCAGGAATGTCGTAATAAGATACCGAAATCTGACAACACAAATACTCCTGCTAGAGCAGTGAGTCGATCCGCCACTTCTGATGAAGATAACGGTCTTGGAGAAGAAAGAAATATTACTTTGCGAACAAAAAAACAGAGCTCGAAATGTGACAGCGATGGATCCTACGTTACTGAAGGACATTTACGTATCATTATTAAACAGGAGATAACAAAAACTATCAAACAACTAGTTTCTGAACACTTATCGAATATTTCCCAACAAATAGCTGACTTCCACGAATCCTTAACATTTTTTAATAAACAATACGAGGAACTCAAGCAAATGGTAAGCGAGAGGGACGATACAATTTCTGATTTAGTTTCTAAAAACAATAATTTAACAATACAAGTGAAGAATTTGACAAATAGACTGGGGCAAGTAGAACAAAGCATGCGTTCCCCAAATATTGAGATCAATGGTATCCCTGAAAATAAATCAGAAAATTTAATAACGACTATTGAGCAGCTGGGTAGAATTGTCGGAAATCCTTTTGGCGACAGCGACATTCTCCACGTAACACGTATTGCCAAACTTAATAAGGAGAATGACCGTCCTCGCTCCGTGATTATTAAACTACGTAGTCAGCGCCGTCGCGATGAGTTGCTGGCTGCAGTTACTAAGTTCAATAAGAAGAATTTAGACAACAAATTGAATTCAGAGCATCTAGGAATCGGGGGACGTCGTGTGCCAGTATTTGTATCTGAACATCTAACGCCGATAAATAAACACTTACATGCGGCCGCTCGTAAGAAGACAAAAGATACTGGTTTTAAGTTTATATGGGTGAGGGATGGTAAAGTTTTCGTAAGGAAAAATGAGCAGAGTCACGTTATATATATTAAAGACGAAGAAAGCTTAAAATTAATTGCCTAG

Protein

MSSVPKICSGCKNKQRKEYMICSACGLGYDLLCANITPKSYFLMDQDRKNNWSCQECRNKIPKSDNTNTPARAVSRSATSDEDNGLGEERNITLRTKKQSSKCDSDGSYVTEGHLRIIIKQEITKTIKQLVSEHLSNISQQIADFHESLTFFNKQYEELKQMVSERDDTISDLVSKNNNLTIQVKNLTNRLGQVEQSMRSPNIEINGIPENKSENLITTIEQLGRIVGNPFGDSDILHVTRIAKLNKENDRPRSVIIKLRSQRRRDELLAAVTKFNKKNLDNKLNSEHLGIGGRRVPVFVSEHLTPINKHLHAAARKKTKDTGFKFIWVRDGKVFVRKNEQSHVIYIKDEESLKLIA

Uniprot

A0A194QEB0   A0A2A4IUU8   A0A0L7L1J8   A0A0L7LEU2   A0A0L7LEV4   A0A2A4JC78   + More
A0A2H1VRS8   A0A0L7K3E6   A0A0L7K4K4   A0A2H1WYV3   A0A2H1VP34   A0A2A4IYB9   A0A0L7KQ92   A0A2W1BYU6   A0A2H1WBH0   A0A2A4IU35   A0A2H1W956   A0A2H1V294   A0A2H1W5G4   A0A2A4IXU4   A0A0L7K3N5   A0A0L7K2U8   A0A0L7LTI6   A0A0L7KUP7   A0A0L7L635   A0A0L7L3E9   A0A2H1VJZ0   A0A212EWC1   A0A0L7L8J7   A0A0L7KR27   A0A1E1WIH3   A0A0L7LF48   A0A0L7K2E3   A0A2H1WI81   A0A2W1BEV5   A0A2A4J0K9   A0A0A9YPR7   A0A2A4JUE7   A0A0L7LCM2   A0A2H1X1K9   A0A2A4IZ17   A0A0A9WQ01   A0A0L7KSF2   H9J7H5   A0A2W1C270   A0A2H1V922   A0A0L7K2T7   A0A2H1WIH0   A0A2H1WRH7  

Pubmed

26354079    26227816    28756777    22118469    25401762    19121390    + More

EMBL

KQ459054    KPJ03878.1    NWSH01007173    PCG63054.1    JTDY01003535    KOB69383.1    + More
JTDY01001361    KOB74078.1    JTDY01001411    KOB73935.1    NWSH01002032    PCG69366.1    ODYU01004037    SOQ43507.1    JTDY01014577    KOB52017.1    JTDY01010989    KOB57787.1    ODYU01012049    SOQ58146.1    ODYU01003592    SOQ42557.1    NWSH01005479    PCG64170.1    JTDY01007401    KOB65231.1    KZ149914    PZC78000.1    ODYU01007238    SOQ49844.1    NWSH01007563    PCG62908.1    ODYU01007128    SOQ49629.1    ODYU01000349    SOQ34960.1    ODYU01006462    SOQ48321.1    NWSH01005418    PCG64228.1    JTDY01012405    KOB52279.1    JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000136    KOB78669.1    JTDY01005451    KOB66988.1    JTDY01015497    JTDY01002687    KOB51945.1    KOB70917.1    JTDY01003264    KOB69846.1    ODYU01002971    SOQ41143.1    AGBW02012032    OWR45776.1    JTDY01002226    KOB71853.1    JTDY01007036    KOB65506.1    GDQN01004260    JAT86794.1    JTDY01001455    KOB73826.1    JTDY01015045    KOB51976.1    ODYU01008832    SOQ52780.1    KZ150150    PZC72841.1    NWSH01003975    PCG65605.1    GBHO01009395    JAG34209.1    NWSH01000638    PCG75103.1    JTDY01001653    KOB73242.1    ODYU01012701    SOQ59142.1    NWSH01005158    PCG64392.1    GBHO01033077    JAG10527.1    JTDY01006445    KOB66006.1    BABH01013843    KZ149908    PZC78213.1    ODYU01001291    SOQ37301.1    JTDY01013395    KOB52145.1    ODYU01008890    SOQ52873.1    ODYU01010507    SOQ55661.1   

Proteomes

UP000053268    UP000218220    UP000037510    UP000007151    UP000005204   

PRIDE

H9J7H5   

Pfam

PF03258   Baculo_FP        + More
PF00628   PHD
PF14529   Exo_endo_phos_2

Interpro

IPR011011   Znf_FYVE_PHD        + More
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR004244   Transposase_22       
IPR004941   Baculo_FP       
IPR019786   Zinc_finger_PHD-type_CS       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001965   Znf_PHD       
IPR005135   Endo/exonuclease/phosphatase       
IPR001841   Znf_RING       
IPR002219   PE/DAG-bd       

SUPFAM

SSF57903   SSF57903        + More
SSF56219   SSF56219       

Gene 3D

3.30.40.10     3.60.10.10    

ProteinModelPortal

A0A194QEB0   A0A2A4IUU8   A0A0L7L1J8   A0A0L7LEU2   A0A0L7LEV4   A0A2A4JC78   + More
A0A2H1VRS8   A0A0L7K3E6   A0A0L7K4K4   A0A2H1WYV3   A0A2H1VP34   A0A2A4IYB9   A0A0L7KQ92   A0A2W1BYU6   A0A2H1WBH0   A0A2A4IU35   A0A2H1W956   A0A2H1V294   A0A2H1W5G4   A0A2A4IXU4   A0A0L7K3N5   A0A0L7K2U8   A0A0L7LTI6   A0A0L7KUP7   A0A0L7L635   A0A0L7L3E9   A0A2H1VJZ0   A0A212EWC1   A0A0L7L8J7   A0A0L7KR27   A0A1E1WIH3   A0A0L7LF48   A0A0L7K2E3   A0A2H1WI81   A0A2W1BEV5   A0A2A4J0K9   A0A0A9YPR7   A0A2A4JUE7   A0A0L7LCM2   A0A2H1X1K9   A0A2A4IZ17   A0A0A9WQ01   A0A0L7KSF2   H9J7H5   A0A2W1C270   A0A2H1V922   A0A0L7K2T7   A0A2H1WIH0   A0A2H1WRH7  

KEGG

NA   

GO

GO:0046872   GO:0035556  

PANTHER

PTHR11505  

Length:

357

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.98505

Exp number, first 60 AAs:

1.98505

Total prob of N-in:

0.10494

outside

1  -  357

 

 

Pi

3.179455

Theta

17.420807

Tajima's D

-1.299238

CLR

38.330339

CSRT

0.0874456277186141

Interpretation

Uncertain