Gene

KWMTBOMO06067

Pre Gene Modal

BGIBMGA002852

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr10(-):17465534-17469444      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.985

CDS

ATGACTCCATTATACAAGCAGTCATGGGCAGTGACTGCAGTGCTACTGAATATGGTTGGTCAGGGAATGCTCCTGAGCTACACCACCAGCCTTCTTCCAGCTCTACAGGCACCTGACTCTCCTATACCAATTGACTTGCAAACTTCTTCGTGGCTATCATCTTCAATCGGCATAGCAGGGATACCTGGGTTCTTCATATCGTCCGCACTAATGGAAAGATATGGGCGAAGAATAGCACACTTTATCCTGATGGTACCGGGGCTACTTGGATGGTTGCTAATATATGCCGGCAACACCGTTCCAGTTTTATTGATGGGTAGACTTCTAGGAGGAATGTCTGCCGGAGCCACCGTATCCTTAGGAGCTATCGTTATTGGAGAATACAGCAGCCCTAAATACCGAGGAATGTTTTTAACTTTGAAAACTGCTTCAGTCTGCTTAGGAGGGATGTTTGTGCACATTTTGGGCCATTTTTATGATTGGAGAACCATAGCGATGCAGGCCATGACCCCCTATATAATCTCCTTGGCCATTATTTGGACGTGGCCAGAAAGTCCAGCATGGTTAGCGTCGAAACAGAATTATGAAAAATGTGAAAAAAACTTTTATTATCTAAGGGGAAACGCTGCAGAGGCCCAGAGAGAACTAGAAGACATGCTACAGTCGCAAATGAGTCGCGCATCTCAAACTACTAAGCAGCTAAGTTTGAGACAAAAGATGATAGAGTTTTTCAAGAAATTCACAAAAAAGAATTTCTTAGGGCCGATGTTTATATTATTGAGTAGCACTGTTTTATTGGAAGCGAGTGGGCGGCATATATTTCCCGCTTACGCTTTGCAGATTATTAGCGAAATAACTGGAAGTAAATCTCAATCTTATTACTACACGCTATGTATTGACGCCATCATAACGGTCAGTGCCGTGTGCTCATCAATCCTCGTTAATGTGATGAGGAGGCGCACGTTGCTGCTGTCCACTGGGCTGGCTGCCTGCTCAGTTTTGATGGTCGTGTGTACATATTTGTTCTTAGTGGCACGAGGATTCATATCTGAAGATTACCACTTTATTCCCATCGGTTTATTTGTGATGTATTTCATCCTTGCCAATTTAGGTTGCAGTCCGATCCCTGTTGCGTTGTTGGGCGAGTTATATCCATTGGAACACAGGGGTGTTGGGTCAGCTGTGACCGGGGTGTTTATATCTTTGGGCGTGAATCTGGCATTACTTTTGACACCGTATTTGTTAGTGAGTATCAAAGTGTACGGGACATTTGCAGTGCTCGGCTTAGTCATGGCCGTCAATTTAACAATTTTGTACTACACGTTACCGGAGACCAAAGACAGGACGCTTCAAGAAATAGAAGATTACTTTGTCGACGGTCAGTTCAAGGACAATAGAAACATTAAGGAAAGTCAAGTTACTGTTAAAATGTTAAAATAG

Protein

MTPLYKQSWAVTAVLLNMVGQGMLLSYTTSLLPALQAPDSPIPIDLQTSSWLSSSIGIAGIPGFFISSALMERYGRRIAHFILMVPGLLGWLLIYAGNTVPVLLMGRLLGGMSAGATVSLGAIVIGEYSSPKYRGMFLTLKTASVCLGGMFVHILGHFYDWRTIAMQAMTPYIISLAIIWTWPESPAWLASKQNYEKCEKNFYYLRGNAAEAQRELEDMLQSQMSRASQTTKQLSLRQKMIEFFKKFTKKNFLGPMFILLSSTVLLEASGRHIFPAYALQIISEITGSKSQSYYYTLCIDAIITVSAVCSSILVNVMRRRTLLLSTGLAACSVLMVVCTYLFLVARGFISEDYHFIPIGLFVMYFILANLGCSPIPVALLGELYPLEHRGVGSAVTGVFISLGVNLALLLTPYLLVSIKVYGTFAVLGLVMAVNLTILYYTLPETKDRTLQEIEDYFVDGQFKDNRNIKESQVTVKMLK

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Belongs to the peptidase C1 family.

Uniprot

H9J017   A0A2A4KA42   A0A2W1B9E8   A0A2H1WKZ9   A0A194QKY0   A0A2H1WK46   + More
A0A2A4KB29   A0A0L7LHM6   A0A2W1BF54   A0A0N1IDG3   A0A2H1WX63   A0A2A4JKJ9   A0A2W1BN20   A0A2A4JJR5   A0A0L7LIB6   A0A0N1IPS2   A0A194QHU0   A0A194QJ23   A0A2A4JTG8   A0A023PNK9   A0A2W1BMU2   H9J4X7   A0A0N1IG19   A0A2A4JNG3   A0A2H1WVP2   A0A2W1BG84   A0A2A4JT91   A0A2A4KAY2   A0A212F161   A0A0N0PEP7   A0A194QJ30   A0A194QJ80   A0A2A4JUU3   A0A212F9C9   A0A0N0PEE0   A0A2W1BD78   A0A2H1WFL6   A0A0N1IHN6   H9J525   A0A0N0PAH4   A0A194QJI7   A0A2H1W936   A0A3S2P2D1   A0A194QPY2   A0A212FJ74   A0A2H1WAU6   A0A212F9B1   A0A0L7KZR3   A0A0N1I9K7   A0A336MDU0   A0A194QJ40   H9J4X0   H9J4R6   H9J4S1   A0A0L7L6T7   A0A194QKX0   A0A0N1IQA0   A0A2A4J748   A0A0L7LRT2   A0A2H1X0D6   A0A2H1WB04   A0A336M7L2   A0A0N1ICC4   A0A336MJD0   A0A3S2LUZ6   A0A1B0CWH0   A0A194QJ63   A0A2W1BFI0   A0A2A4JSU4   A0A0N0PE20   E0X906   A0A3S2NLE7   A0A1L8DF47   H9J4X2   A0A1L8DFA5   H9IWZ7   A0A3S2LEF2   A0A3S2NWF9   H9JAI4   A0A182WKH8   A0A2W1BQ15   A0A212FCC0   A0A194R9K8   A0A0N1IPZ8   A0A2H1WFM1   A0A182MLS9   A0A2H1X3Y1   H9J4X3   B0W5I1   A0A182GCQ0   H9J4U8   A0A182GTB3   A0A0L7L7N1   A0A2W1BDG5   B0W5I2   A0A2H1V0I3   H9J539   A0A0L7KM51   A0A182XN09  

Pubmed

19121390    28756777    26354079    26227816    24730650    22118469    + More
26483478   

EMBL

BABH01018801    NWSH01000008    PCG80949.1    KZ150249    PZC71838.1    ODYU01009373    + More
SOQ53753.1    KQ458671    KPJ05560.1    ODYU01009098    SOQ53272.1    PCG80950.1    JTDY01001035    KOB75068.1    PZC71837.1    KQ459158    KPJ03590.1    ODYU01011726    SOQ57638.1    NWSH01001160    PCG72306.1    KZ150067    PZC74120.1    PCG72307.1    JTDY01001021    KOB75109.1    KQ460077    KPJ17881.1    KQ458981    KPJ04505.1    KPJ05558.1    NWSH01000704    PCG74682.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    KZ150062    PZC74196.1    BABH01025717    KPJ17891.1    NWSH01001042    PCG72950.1    ODYU01011356    SOQ57052.1    PZC71836.1    PCG74683.1    PCG80953.1    AGBW02010956    OWR47467.1    KQ459890    KPJ19577.1    KPJ05563.1    KPJ05572.1    NWSH01000578    PCG75536.1    AGBW02009614    OWR50323.1    KPJ19576.1    PZC71835.1    ODYU01008354    SOQ51875.1    KPJ17887.1    BABH01038881    KQ458842    KPJ04897.1    KPJ05554.1    ODYU01007122    SOQ49615.1    RSAL01000045    RVE50592.1    KPJ05561.1    AGBW02008317    OWR53759.1    SOQ49614.1    OWR50324.1    JTDY01004123    KOB68566.1    KPJ17880.1    UFQT01001016    SSX28504.1    KPJ05573.1    BABH01025733    BABH01035548    BABH01035527    BABH01035528    BABH01035529    JTDY01002553    KOB71188.1    KPJ05555.1    KPJ19574.1    NWSH01002771    PCG67556.1    JTDY01000230    KOB78170.1    ODYU01012470    SOQ58795.1    ODYU01007347    SOQ50032.1    UFQT01000224    SSX22028.1    KPJ04898.1    UFQT01001316    SSX30005.1    RSAL01000181    RVE44925.1    AJWK01032461    KPJ05557.1    KZ150133    PZC73021.1    PCG74684.1    KQ460126    KPJ17588.1    GQ871756    ADM86147.1    RVE50591.1    GFDF01009026    JAV05058.1    BABH01025724    GFDF01009027    JAV05057.1    BABH01021167    RVE44926.1    RVE50589.1    BABH01009421    KZ149985    PZC75704.1    AGBW02009205    OWR51384.1    KQ460761    KPJ12541.1    KPJ17883.1    SOQ51878.1    AXCM01002831    ODYU01013263    SOQ59968.1    BABH01025723    DS231843    EDS35464.1    JXUM01009472    KQ560284    KXJ83288.1    BABH01035543    JXUM01086634    KQ563580    KXJ73638.1    JTDY01002470    KOB71349.1    PZC71834.1    EDS35465.1    ODYU01000118    SOQ34347.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    JTDY01008796    KOB64392.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000053240    UP000007151    + More
UP000283053    UP000092461    UP000075920    UP000075883    UP000002320    UP000069940    UP000249989    UP000076407   

PRIDE

H9J017    H9J4X7    H9J525    H9J4X0    H9J4R6    H9J4S1    + More
E0X906    H9J4X2    H9IWZ7    H9JAI4    H9J4X3    H9J4U8    H9J539   

Pfam

PF00083   Sugar_tr        + More
PF08246   Inhibitor_I29
PF00112   Peptidase_C1

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR003663   Sugar/inositol_transpt       
IPR005829   Sugar_transporter_CS       
IPR013201   Prot_inhib_I29       
IPR039417   Peptidase_C1A_papain-like       
IPR038765   Papain-like_cys_pep_sf       
IPR000668   Peptidase_C1A_C       
IPR000169   Pept_cys_AS       

SUPFAM

SSF103473   SSF103473        + More
SSF54001   SSF54001       

CDD

cd06174  MFS
cd02248  Peptidase_C1A

ProteinModelPortal

H9J017   A0A2A4KA42   A0A2W1B9E8   A0A2H1WKZ9   A0A194QKY0   A0A2H1WK46   + More
A0A2A4KB29   A0A0L7LHM6   A0A2W1BF54   A0A0N1IDG3   A0A2H1WX63   A0A2A4JKJ9   A0A2W1BN20   A0A2A4JJR5   A0A0L7LIB6   A0A0N1IPS2   A0A194QHU0   A0A194QJ23   A0A2A4JTG8   A0A023PNK9   A0A2W1BMU2   H9J4X7   A0A0N1IG19   A0A2A4JNG3   A0A2H1WVP2   A0A2W1BG84   A0A2A4JT91   A0A2A4KAY2   A0A212F161   A0A0N0PEP7   A0A194QJ30   A0A194QJ80   A0A2A4JUU3   A0A212F9C9   A0A0N0PEE0   A0A2W1BD78   A0A2H1WFL6   A0A0N1IHN6   H9J525   A0A0N0PAH4   A0A194QJI7   A0A2H1W936   A0A3S2P2D1   A0A194QPY2   A0A212FJ74   A0A2H1WAU6   A0A212F9B1   A0A0L7KZR3   A0A0N1I9K7   A0A336MDU0   A0A194QJ40   H9J4X0   H9J4R6   H9J4S1   A0A0L7L6T7   A0A194QKX0   A0A0N1IQA0   A0A2A4J748   A0A0L7LRT2   A0A2H1X0D6   A0A2H1WB04   A0A336M7L2   A0A0N1ICC4   A0A336MJD0   A0A3S2LUZ6   A0A1B0CWH0   A0A194QJ63   A0A2W1BFI0   A0A2A4JSU4   A0A0N0PE20   E0X906   A0A3S2NLE7   A0A1L8DF47   H9J4X2   A0A1L8DFA5   H9IWZ7   A0A3S2LEF2   A0A3S2NWF9   H9JAI4   A0A182WKH8   A0A2W1BQ15   A0A212FCC0   A0A194R9K8   A0A0N1IPZ8   A0A2H1WFM1   A0A182MLS9   A0A2H1X3Y1   H9J4X3   B0W5I1   A0A182GCQ0   H9J4U8   A0A182GTB3   A0A0L7L7N1   A0A2W1BDG5   B0W5I2   A0A2H1V0I3   H9J539   A0A0L7KM51   A0A182XN09  

PDB

4LDS     E-value=6.70244e-23,     Score=266

KEGG

101747196    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0008234   GO:0008026   GO:0016818   GO:0004003   GO:0003677   GO:0000723   GO:0005634   GO:0006260   GO:0055085  

Length:

479

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

263.9754

Exp number, first 60 AAs:

33.73724

Total prob of N-in:

0.98882

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  49

TMhelix

50  -  69

inside

70  -  80

TMhelix

81  -  103

outside

104  -  107

TMhelix

108  -  130

inside

131  -  136

TMhelix

137  -  159

outside

160  -  168

TMhelix

169  -  191

inside

192  -  250

TMhelix

251  -  273

outside

274  -  292

TMhelix

293  -  315

inside

316  -  321

TMhelix

322  -  344

outside

345  -  358

TMhelix

359  -  381

inside

382  -  393

TMhelix

394  -  416

outside

417  -  419

TMhelix

420  -  442

inside

443  -  479

 

 

Pi

5.397353

Theta

13.937364

Tajima's D

-0.696564

CLR

0.550622

CSRT

0.19994000299985

Interpretation

Uncertain