Gene
KWMTBOMO06065
Annotation
Transposon_Ty3-I_Gag-Pol_polyprotein_[Operophtera_brumata]
Location in the cell
Cytoplasmic Reliability : 2.429
Sequence
CDS
ATGGATTTACCTATCTTACAAGAGCTTCTGAAGGCCATCAAAGACGCAGTTTCCGGTTCCCGCCAGAACGACAGCGAGGTCGCCCTGCCCGTATTTGATCCTGCTAAAAGTGACCTTGGTGCTGAATCATGGTGCAACAATATTGAAACCCTCTCCAAAGAGTTTGGATGGAGTAACATCGCAACAGTCGCCAAAGCTGGTAAGGCCCTTAAGGGATCCGCCTTATTGTGGTTTGAAACATGGGACCCGGCTGAGGGTCGTTCGTGGGACAATTTACGTTTAGAGCTGGTAGCTTTATACCCTGAGAAAAAGAATCTAGCAGAAAAACTTCATAAGGCAGTACTATACACGTCGGAAACTGCAGATTCTTATTGCGAGTACGCAAGGGAAAAAATTAGTATAATGGAACTCTCAGGTGCGATAAACAGTCTAGATCATCAGCTGCAGGATAGGATAAGGGCTATTTTTCAAAAATACCCCTCTGTTTTGGACAATATTGGTCATGTAAAGACTGGTGAACTTGAAATAAAATTAAAAAGAGATGAGGTTGAGCGTTATGTGGCTACTGTAGTCAATATGTTAAACACTATGTGCGAGGAGCCGTCAGAGTGGCCGAACGTATTGCCAAAAGTACAGCAGTCAATTAACACGACAGTACAAAAATCGACTGGTTTCACCCCCTTACGTTTACTAACCGGTATAGAAGCAAATATACCTATAGTACAATCTCATCTAAACGGAATTATTAATGATGAGGATTTACACCCCAATATTGACGTCCAAGCTGATCGTGAAATAGCCAAACAGAGACTACAAAAAATAGCAGAAACATTTAAACAACGATTTGATCATGTTAGGCGGAATAATAAACAATACAATATAGGTGATTTGGTCTATGTCAGCCAAGATCATAGGCGTAATGATAAATTAAGATCTAGATTTAAGGGCCCTTACGAAATTCAGTCTATCCTTCCAAATGATCGCTATACTCTGAAAGGCAACGGTAATGTTAGGAATATAGTTGTCGCTAAGGAAAAATTACGGTTTTGGCCAGGAGAATGGGTTGATGATAATTTGTGA
Protein
MDLPILQELLKAIKDAVSGSRQNDSEVALPVFDPAKSDLGAESWCNNIETLSKEFGWSNIATVAKAGKALKGSALLWFETWDPAEGRSWDNLRLELVALYPEKKNLAEKLHKAVLYTSETADSYCEYAREKISIMELSGAINSLDHQLQDRIRAIFQKYPSVLDNIGHVKTGELEIKLKRDEVERYVATVVNMLNTMCEEPSEWPNVLPKVQQSINTTVQKSTGFTPLRLLTGIEANIPIVQSHLNGIINDEDLHPNIDVQADREIAKQRLQKIAETFKQRFDHVRRNNKQYNIGDLVYVSQDHRRNDKLRSRFKGPYEIQSILPNDRYTLKGNGNVRNIVVAKEKLRFWPGEWVDDNL
Summary
Uniprot
ProteinModelPortal
PDB
3DLR
E-value=0.00161235,
Score=98
Ontologies
KEGG
GO
Topology
Length:
359
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00095
outside
1 - 359
Population Genetic Test Statistics
Pi
2.003793
Theta
13.324024
Tajima's D
-0.985918
CLR
31.313108
CSRT
0.137493125343733
Interpretation
Uncertain
