SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06059
Pre Gene Modal
BGIBMGA002848
Annotation
Uncharacterized_protein_OBRU01_18367_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 2.167
 

Sequence

CDS
ATGCAGTCCTACGTGTTCTGCCTCCTGGTCGTGGTTGCGGTCGCCGCTGCCGCCCCGCAGCGCGAGGGTGCTGTCTTCTCAAACGAAGCCATCAAACAGGCCCAGAACACTCAGCTTATTCCTAAGGATGCCGTGATCCAGAAGGTCCAAGAGGGTATTGAACTCGCGGCCTACCAGTCAATCCCTGGCAACCAGAGGATCAACCTGTACGAGATCCTAGGAGACCAGGTGCCTTCTGAAGTCATCAACAATCTGCAGAGCCAGATTGACCAAGTCGGCAGGAACTGA
Protein
MQSYVFCLLVVVAVAAAAPQREGAVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQRINLYEILGDQVPSEVINNLQSQIDQVGRN

Summary

EMBL
BABH01018822    BABH01018823    JTDY01004261    KOB68367.1    JTDY01004942    KOB67574.1    + More
AGBW02008947    OWR52110.1    KQ981820    KYN35297.1    KQ976465    KYM84290.1    ADTU01018466    KQ980304    KYN16800.1    KQ982254    KYQ58638.1    KK107020    QOIP01000006    EZA62603.1    RLU21262.1    KQ434783    KZC04874.1    KQ978390    KYM94314.1    GL764146    EFZ18244.1    KZ288201    PBC33545.1    ODYU01001174    SOQ37025.1    KZ150039    PZC74589.1    GL451188    EFN79861.1    CH902620    EDV32414.1    KQ414705    KOC63194.1    NNAY01001504    OXU23769.1    AK401028    BAM17650.1    AK402396    BAM19018.1    KQ971372    EFA09501.2    KQ435687    KOX81394.1    KQ460784    KPJ12210.1    CM000157    EDW87992.1    CH954177    EDV58978.1    CM000361    CM002910    EDX04604.1    KMY89621.1    CH686196    CH480818    EDW44100.1    EDW52502.1    AE014134    AAF53010.1    ACL83019.1    JRES01001119    KNC25372.1    CVRI01000059    CRL03644.1    NEVH01006727    PNF36849.1    OUUW01000006    SPP81746.1    CH916372    EDV98920.1    CH963852    EDW75642.1    GL440281    EFN66060.1    KQ459472    KPJ00225.1    GBHO01039120    JAG04484.1    CP012523    ALC38683.1    CCAG010014472    JXJN01001028    CAQQ02184642    CH379061    EAL33125.1    CH479189    EDW25511.1    KK855082    PTY20713.1    GEBQ01005309    JAT34668.1    GECU01022459    JAS85247.1    GECZ01024598    GECZ01001953    JAS45171.1    JAS67816.1    PYGN01002177    PSN31259.1    CH940649    EDW64763.1    CH933807    EDW12694.1    GDKW01001905    JAI54690.1    ACPB03018199    GAHY01001749    JAA75761.1    GGMS01007594    MBY76797.1    APGK01059107    KB741292    KB632056    ENN70417.1    ERL88357.1    GGMR01006388    MBY19007.1    ABLF02039938    AK340764    BAH71309.1    UFQS01001089    UFQT01001089    SSX08933.1    SSX28844.1    GAPW01006559    JAC07039.1    JXUM01035922    GAPW01006539    KQ561078    JAC07059.1    KXJ79782.1    CH477225    EAT47161.1    EAT47162.1    DS233020    EDS27524.1    DS235032    EEB10753.1    UFQS01006312    UFQT01006312    SSX16933.1    SSX36097.1    ADMH02002106    ADMH02001156    ETN58974.1    ETN63867.1    GAMD01003445    JAA98145.1    GGFM01006181    MBW26932.1    ADMH02002083    ETN59446.1    GFDF01005940    JAV08144.1    AJWK01017239    AXCM01015184    AAAB01008964    EAA12684.2    APCN01000802    ETN59447.1    AJVK01005415    ATLV01020380    ATLV01020381    KE525299    KFB45224.1    LNIX01000006    OXA52562.1    UFQT01000326    SSX23275.1    LJIJ01000417    ODM97720.1   
Pfam
PF01979   Amidohydro_1        + More
PF03190   Thioredox_DsbH
Interpro
IPR017593   Allantoinase        + More
IPR018228   DNase_TatD-rel_CS       
IPR006680   Amidohydro-rel       
IPR011059   Metal-dep_hydrolase_composite       
IPR002195   Dihydroorotase_CS       
IPR032466   Metal_Hydrolase       
IPR012341   6hp_glycosidase-like_sf       
IPR008928   6-hairpin_glycosidase_sf       
IPR024705   Ssp411       
IPR004879   DUF255       
IPR036249   Thioredoxin-like_sf       
SUPFAM
SSF51556   SSF51556        + More
SSF51338   SSF51338       
SSF48208   SSF48208       
SSF52833   SSF52833       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.992776
 
 
Length:
95
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.55224
Exp number, first 60 AAs:
1.55224
Total prob of N-in:
0.17194
outside
1  -  95
 
 

Population Genetic Test Statistics

Pi
20.764699
Theta
22.920426
Tajima's D
-0.369387
CLR
3.912891
CSRT
0.271536423178841
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号