Silkworm Genome Informatics Database

Gene

KWMTBOMO06058 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002847

Annotation

PREDICTED:_uncharacterized_protein_LOC106713873_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr10(+):17170005-17228806 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.953

CDS

ATGGCGTCGCCAAGATTTTCAACCATTTTGCTAGCAGCATTCCATCTTTTTACCGTATGTTGGGGAGGTCCGGTGGGTCCGCTACCGAATGTAACGAGCGTCGATTTGGGACTTAAAGAAGGTAGTTGCGCGCTAGGAGACGTGGTATATCTTCCCGGAGACGAATTCCCAGGTTCAGACCCCTGCGAGAAGTGCAAGTGCTCCGATGGAGGGGGGGTCCAATGTGAGAAGCAGCAATGCGAATCCAGGCCTGGCTGCAAGGCTGTGCATCGACCCGACCATTGCTGTCCAACGTATCAGTGTGATTGCGAGCAAGAAGGTCGTGTCTACGATAACGGTGAAAAGTTGGTCGATCCTGCAGATCCCTGCCGCGTGTGCTACTGCCAGGGGGGAGAGGTAGTCTGCAGACGGATCGCTTGCTTCGTCAGAGATGACTGCACTCCTCGGCTTGTGCCCGGTAGATGTTGTCCTGAATACGACAACTGTCCTGTCAGAGGGGTAACCATGCTTCCTGGCGTCTCTTCCTTGCCGCCCAACCTTTCACCTACAGAAGATATCAAGGGTAGTGCTGCACCAACTGCTCCTAAGGAAAATCTTAAACAAGAATTCACTATTAAGGAAATAACACCAGTATCTGAGATTCCTATAATGAATGATGTGAAAATTAAAAAGATCTTACCATTTCCAAGTATCGACGTTGCCGAGTATTCATCGTCGAAGTCTCCTCCTATCACAAGAGAAGCTACTTCTGAGATATCCGTTAAAACAGAATCTGAAATCGTCAAAACGGACGCTCCTACGATCACTGAAGTCCATCAGAAAGAGAGTGACAAGAAGCCAGATGATACACAGCCCTCTAAAATAAGTTTTTCTACTCAAGATTCTATTAACAGTGATATTTATTCGTCGAATGAATCAACTGTCACAAATGGATTACCTACAGCTCCATCTGTGACTACAACTAAAGCACCGATCATTGAAGAAGAAGACACATCACTTTTTGATCATAACCCAGCATTCCCACCTATTCCAGACGATTTAGCAGTCTTGAGCAACCACGGAGATGAAATCGTACCCGAGCCATCTGCAGAGGGCGACCACATGACTGTGCACGACACCGTTCCCAGCTTGCCTTCAGTAGAGCCAAAGCTTGAAGAACCTATTGAACCTAAAGAAGTCACTGACATTATACTGACAACTGAAAAACCATCGGTCACTTCAATCGAAACTAGTACAACAGCTAAACAAGAAAGCACTACAGTTGTAGAACAGCTCAAAGAAAGCCCAATGCTTAATTTGAGGTCCGCTATACCAACTGAGATACTCAACGCTCCATCTCTTGTACCAGCAGACACCGGGGAGCCGTTAGATGATGGCATAACTACTGATGTACCAGAAATATCCTCAACCACAGAGGAAACCGAAACGTCCAAAGAAAGCTCTAACCACACTATTGAAGTTTCTGAAACTCCTGTTATCGAATCTTTTGCTACAGCTACTGGTGCAGAATTAGACACAACCACTCCTAAAGTATCCACTGAACATGAAATTGAAGTCACCACTAAAGACCTGGAACAAACGACCAGTTCGATAGCAAAATCAAATAGCGCAACGGAAGTGACGTCCCATACTGAAATTAGTTCTTTACCGATTGAAACGAGTGATCAAAATCCACACGAGTCTGAAGCTGTGGTGAAAGATAAAATCGTAGACTCTACTATCGACCCTTTTGCAACTAGCGCTAAGGTTTCACCGTCTGAAGTAATAACCGTTTCAAGGGCGGTGTCAAATGAAGATAACGTATTTGAAAACGTTGAAACTACTGAATTTATTTTAACATCGTTTGGCTCTTCCGAAACTGCCACCGATTCTGTCGAATTGATCAAAATATCTGGTGATCCTGAGAAAAGTGCTCAGATAGTTGTAGAGCCTGAAGAGAAGAGGAATAGTGTACTCGCTGATTTAATTAATCTAGTTAGCGACGTAGCCACGATTAACGACCACACTGAAAACCCTAATAAGGAACAAGCACCGAAACCAACTAGTATATCTGATTCTGAAGAACTCATACCAGTCAACGCTGGGTACAAAAGCAAGAACAGTAATTATAATCAAAACTCTATAACTGAAATTCCTTACAAATCAAAAAATACTCCAGGAAACCGTCAAAAAGTAGTCGAAATAGAAGACGACGAATCTGAGAGTATTACTGATCTTCCGGCACCACACGACAAGGTGGAACCTACCACACGCCGACCGATTATCGATAATGTGTCGGACAAAAAGATGGAGAACAAAACTCAGGAAAAAGATACCGAAATCATAACGCAGTCTTACGTCCCGACGATCAACAGACGGCCGATAAAGGTCATCATGAAGAAAAATAACGACAGGCCGGTTACTGAGTCACCCGAAGGCTCACTGGTATCTGTCTCGAGTGAGGCCTTTACTGATGACATAACCGACACCACAGAGAATAGCGTGGCTGCAGAGGAGAAGAAACGTACAGAAGATTCCACGGAAACCGTGCTGGTCACAGAGGCTCAATGA

Protein

MASPRFSTILLAAFHLFTVCWGGPVGPLPNVTSVDLGLKEGSCALGDVVYLPGDEFPGSDPCEKCKCSDGGGVQCEKQQCESRPGCKAVHRPDHCCPTYQCDCEQEGRVYDNGEKLVDPADPCRVCYCQGGEVVCRRIACFVRDDCTPRLVPGRCCPEYDNCPVRGVTMLPGVSSLPPNLSPTEDIKGSAAPTAPKENLKQEFTIKEITPVSEIPIMNDVKIKKILPFPSIDVAEYSSSKSPPITREATSEISVKTESEIVKTDAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIVPEPSAEGDHMTVHDTVPSLPSVEPKLEEPIEPKEVTDIILTTEKPSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGITTDVPEISSTTEETETSKESSNHTIEVSETPVIESFATATGAELDTTTPKVSTEHEIEVTTKDLEQTTSSIAKSNSATEVTSHTEISSLPIETSDQNPHESEAVVKDKIVDSTIDPFATSAKVSPSEVITVSRAVSNEDNVFENVETTEFILTSFGSSETATDSVELIKISGDPEKSAQIVVEPEEKRNSVLADLINLVSDVATINDHTENPNKEQAPKPTSISDSEELIPVNAGYKSKNSNYNQNSITEIPYKSKNTPGNRQKVVEIEDDESESITDLPAPHDKVEPTTRRPIIDNVSDKKMENKTQEKDTEIITQSYVPTINRRPIKVIMKKNNDRPVTESPEGSLVSVSSEAFTDDITDTTENSVAAEEKKRTEDSTETVLVTEAQ

Uniprot

H9J012 A0A2W1BPC4 A0A2H1V8A2 A0A0N1IP38 A0A194Q4E9 A0A0L7KPJ7 + More
A0A212FEH4 S4PJ60

Pubmed

19121390 28756777 26354079 26227816 22118469 23622113 + More

EMBL

BABH01018823 BABH01018824 KZ150039 PZC74590.1 ODYU01001174 SOQ37026.1 + More
KQ460784 KPJ12211.1 KQ459472 KPJ00224.1 JTDY01007665 KOB65040.1 AGBW02008947 OWR52108.1 GAIX01005135 JAA87425.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510 UP000007151

PRIDE

H9J012

Interpro

IPR001007 VWF_dom

ProteinModelPortal

H9J012 A0A2W1BPC4 A0A2H1V8A2 A0A0N1IP38 A0A194Q4E9 A0A0L7KPJ7 + More
A0A212FEH4 S4PJ60

PDB

1U5M E-value=0.00332702, Score=99

KEGG

101745698 no KO assigned | (RefSeq) von Willebrand factor C and EGF domain-containing protein

GO

GO:0005515 GO:0008270 GO:0008234 GO:0008026 GO:0016818 GO:0004003 GO:0003677 GO:0000723 GO:0005634 GO:0006260

SignalP

Position: 1 - 22, Likelihood: 0.997730

Length:

849

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.07619

Exp number, first 60 AAs:

5.07619

Total prob of N-in:

0.23532

outside

1 - 849

Pi

27.463111

Theta

23.562917

Tajima's D

-1.386718

CLR

0.684866

CSRT

0.0742462876856157

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
25044914	AVHNANYHQYK	100.00	4e-10
29197581	VQEGIEIAAYQSIPGNQR	100.00	4e-10
29197581	CCPEYDNCPVR	100.00	3e-09
25860555	NTSCVAAIIPTCHCDDGFIFDKSGK	100.00	6e-06
25044914	TQEEQVEICK	100.00	6e-06
27102218	CCPEYDNCPVR	100.00	6e-06
29197581	RPIIDNVSDKK	100.00	6e-06
25860555	FKGNYGDDISFEIAGVR	100.00	2e-05
25044914	VCYAFGGIIK	100.00	0.002
24093152	VCPPEYDPVCGTDDK	100.00	0.002
27102218	ESPMINIR	100.00	0.002
29197581	TDAPTITEVHQK	100.00	0.002
24093152	DTDSEEEIR	100.00	0.003
29197581	VCYCQGGEVVCR	100.00	0.003
25860555	WVISAASCIQDVR	100.00	0.007
24093152	EITFSDIVGPACIPFK	100.00	0.007
29197581	IVDPADPCR	100.00	0.040

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics