Gene

KWMTBOMO06052

Pre Gene Modal

BGIBMGA002857

Annotation

PREDICTED:_uncharacterized_protein_LOC101735678_[Bombyx_mori]

Location

Bomo_Chr10(-):17069844-17078875      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 0.758

CDS

ATGCCAAAGCCATTTAAAAGCAGTGCAAGAGAGATTGTGTTGAAGGTTCGTGCCTTTTGTGAGAGAGAAAAGGCAAACCAAGCCCCGTTAATTAGACTCGATCAAGTGCGAGCACGAGTCGCCGCAATGACAGGCATGTCGGAGAAAACCGATTTTGAAGAGCCTGCACAGCTGTCCGGGCCATTGACAAAAGCCTACGCAAGAGAACTGGTATTACATTTGATTGATGAAGAAAGGAAGATGTTGTTAAGTGCACTTCAAGAATATGAATCAAACCGAGTCAAAGAAGAATTCGAAGAAACACTAGCCGCCCAGAGATGGAGGTCAAAACTAGGTCGACCAAGTAAAGTTCCCACACTAGGTGATGTCGATCCCACGGGTTCTTACTGCCCGGTACCTGAAGACTGGCTAAAGAAGAAATATGCTGCCACAGTACCAAAGCCGACGACCAAGGAACTGTTCCACTTGAGCTTAGCAAACTCTATACCGTTCATTGGGTTTGGTTTTTTGGACAACTTCATCATGATAATTGCTGGAGACAGCATCGAGAGCAGCATGAGCGCGTACATAACGCTTTCGACGATGGCGGCGGCGGCGCTGGGCAACACGTTCAGCGACGTCATCGGCATCGGCTCGTCCTACTACGTGGAGCGCGGCGCCGCCATGATCGGGCTGGGCGCGCCCGCGCTGTCGCCCGTCCAGCTCGACATGCCCATCAGCAGGCGCTTCGCCAACGTGGGCAGAGTTCTCGGCATAACTCTCGGCTGTTTCCTCGGCATGACGCCGCTGCTCTTCAAGGACGACGAGAAGAAGCCAGAGGCCAAGGCGACCTCGACCGAACCTAAAACTTAG

Protein

MPKPFKSSAREIVLKVRAFCEREKANQAPLIRLDQVRARVAAMTGMSEKTDFEEPAQLSGPLTKAYARELVLHLIDEERKMLLSALQEYESNRVKEEFEETLAAQRWRSKLGRPSKVPTLGDVDPTGSYCPVPEDWLKKKYAATVPKPTTKELFHLSLANSIPFIGFGFLDNFIMIIAGDSIESSMSAYITLSTMAAAALGNTFSDVIGIGSSYYVERGAAMIGLGAPALSPVQLDMPISRRFANVGRVLGITLGCFLGMTPLLFKDDEKKPEAKATSTEPKT

Uniprot

H9J022   A0A0N1PGM3   A0A194Q3U6   A0A2W1BNZ5   A0A0L7K4M9   N6TQ11   + More
U4TWQ7   A0A069DQY3   D6X0I0   A0A146MFX0   A0A0P4VKY0   A0A1B6HRM0   A0A0A9WN50   A0A1B6FMG3   A0A1B6F1S5   A0A1B6J3I0   E0VQ09   A0A1B6E828   A0A1B6MER8   J9K8P7   A0A2M4ASD4   A0A2M4CVY1   A0A2M4CUP9   A0A2M3ZBR2   A0A2M4BXA0   U5ENA9   Q7PWC3   A0A182YFR6   A0A1S4H0M7   Q17K58   A0A1Y1N328   A0A2H8TM17   A0A0K8U3Q7   A0A034WKG1   A0A1Q3G1P0   E2A7L7   A0A195B387   A0A158NNJ2   A0A310SCS0   W8BEV4   A0A195F785   E2C9P6   F4WQF0   A0A151X931   A0A151I9M6   A0A0A1XLJ2   A0A2R7W2K1   A0A2A3EJ39   A0A195DLR2   A0A232F841   A0A0K8TLC5   A0A154PCT1   A0A1J1HVF7   A0A088APU4   A0A0L7QLW9   A0A336MFB0   A0A1A9Y567   A0A1A9ZP16   A0A1B0GA73   A0A1I8NWY1   A0A1A9WKC5   A0A336MQU0   A0A0N0U318   A0A1B0BXV5   A0A1I8NB44   B3MAX2   A0A0L0CDX1   A0A3Q0IS33   A0A0Q9W9P9   A0A3B0KQR1   B5DH68   B4MUN0   A0A0J9R659   Q8SYF7   M9NDV5   A0A0R1E733   A0A1W4UG93   A0A0Q5VU67   A0A3L8D4D6   A0A336MFN0   A0A336L7J5   A0A336MKV3   A0A336LG78   A0A1L8D9H0   M9NFF0   A0A182INM3   A0A182RLD0  

Pubmed

19121390    26354079    28756777    26227816    23537049    26334808    + More
18362917    19820115    26823975    27129103    25401762    20566863    12364791    25244985    17510324    28004739    25348373    20798317    21347285    24495485    21719571    25830018    28648823    26369729    25315136    17994087    26108605    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    30249741   

EMBL

BABH01018850    KQ460784    KPJ12218.1    KQ459472    KPJ00213.1    KZ150039    + More
PZC74596.1    JTDY01010822    KOB57977.1    APGK01059090    KB741292    ENN70406.1    KB630724    KB631576    KB632349    ERL83811.1    ERL84393.1    ERL93224.1    GBGD01002827    JAC86062.1    KQ971372    EFA09568.1    GDHC01000852    JAQ17777.1    GDKW01003604    JAI52991.1    GECU01030382    GECU01016607    GECU01011152    JAS77324.1    JAS91099.1    JAS96554.1    GBHO01037324    GBHO01037323    JAG06280.1    JAG06281.1    GECZ01018399    JAS51370.1    GECZ01025560    JAS44209.1    GECU01014046    GECU01013030    JAS93660.1    JAS94676.1    DS235387    EEB15465.1    GEDC01003231    JAS34067.1    GEBQ01005576    JAT34401.1    ABLF02022652    GGFK01010395    MBW43716.1    GGFL01005302    MBW69480.1    GGFL01004896    MBW69074.1    GGFM01005236    MBW25987.1    GGFJ01008574    MBW57715.1    GANO01004187    JAB55684.1    AAAB01008984    EAA15146.4    CH477228    EAT47034.1    GEZM01018936    JAV89957.1    GFXV01003399    MBW15204.1    GDHF01030965    JAI21349.1    GAKP01004110    JAC54842.1    GFDL01001330    JAV33715.1    GL437352    EFN70566.1    KQ976641    KYM78747.1    ADTU01021611    KQ761346    OAD57846.1    GAMC01014790    GAMC01014789    GAMC01014788    GAMC01014787    JAB91766.1    KQ981744    KYN36246.1    GL453876    EFN75335.1    GL888273    EGI63550.1    KQ982383    KYQ56887.1    KQ978273    KYM95776.1    GBXI01002547    JAD11745.1    KK854268    PTY13984.1    KZ288232    PBC31494.1    KQ980765    KYN13429.1    NNAY01000768    OXU26613.1    GDAI01002451    JAI15152.1    KQ434874    KZC09631.1    CVRI01000020    CRK91340.1    KQ414905    KOC59605.1    UFQT01001120    SSX28995.1    CCAG010019840    UFQS01002029    UFQT01002029    SSX13010.1    SSX32450.1    KQ435922    KOX68678.1    JXJN01022371    CH902618    EDV40238.1    JRES01000523    KNC30431.1    CH940649    KRF81126.1    OUUW01000010    SPP86218.1    CH379058    EDY69643.2    CH963857    EDW76225.2    CM002910    KMY91473.1    KMY91474.1    KMY91476.1    AY071582    AY113392    BT003227    AE014134    AAL49204.1    AAM29397.1    AAO24982.1    EAA46028.2    AFH03809.1    CH891577    KRK05030.1    CH954179    KQS61771.1    QOIP01000013    RLU15362.1    SSX28996.1    SSX13011.1    SSX32451.1    SSX28997.1    SSX13012.1    SSX32452.1    GFDF01010973    JAV03111.1    AFH03810.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000037510    UP000019118    UP000030742    + More
UP000007266    UP000009046    UP000007819    UP000007062    UP000076408    UP000008820    UP000000311    UP000078540    UP000005205    UP000078541    UP000008237    UP000007755    UP000075809    UP000078542    UP000242457    UP000078492    UP000215335    UP000076502    UP000183832    UP000005203    UP000053825    UP000092443    UP000092445    UP000092444    UP000095300    UP000091820    UP000053105    UP000092460    UP000095301    UP000007801    UP000037069    UP000079169    UP000008792    UP000268350    UP000001819    UP000007798    UP000000803    UP000002282    UP000192221    UP000008711    UP000279307    UP000075880    UP000075900   

PRIDE

H9J022    Q8SYF7    M9NFF0   

Pfam

PF10507   TMEM65        + More
PF08606   Prp19
PF00400   WD40

Interpro

IPR019537   TMEM65        + More
IPR020472   G-protein_beta_WD-40_rep       
IPR038959   Prp19       
IPR036322   WD40_repeat_dom_sf       
IPR013915   Pre-mRNA_splic_Prp19       
IPR019775   WD40_repeat_CS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR003613   Ubox_domain       
IPR017986   WD40_repeat_dom       
IPR013083   Znf_RING/FYVE/PHD       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10     3.30.40.10    

ProteinModelPortal

H9J022   A0A0N1PGM3   A0A194Q3U6   A0A2W1BNZ5   A0A0L7K4M9   N6TQ11   + More
U4TWQ7   A0A069DQY3   D6X0I0   A0A146MFX0   A0A0P4VKY0   A0A1B6HRM0   A0A0A9WN50   A0A1B6FMG3   A0A1B6F1S5   A0A1B6J3I0   E0VQ09   A0A1B6E828   A0A1B6MER8   J9K8P7   A0A2M4ASD4   A0A2M4CVY1   A0A2M4CUP9   A0A2M3ZBR2   A0A2M4BXA0   U5ENA9   Q7PWC3   A0A182YFR6   A0A1S4H0M7   Q17K58   A0A1Y1N328   A0A2H8TM17   A0A0K8U3Q7   A0A034WKG1   A0A1Q3G1P0   E2A7L7   A0A195B387   A0A158NNJ2   A0A310SCS0   W8BEV4   A0A195F785   E2C9P6   F4WQF0   A0A151X931   A0A151I9M6   A0A0A1XLJ2   A0A2R7W2K1   A0A2A3EJ39   A0A195DLR2   A0A232F841   A0A0K8TLC5   A0A154PCT1   A0A1J1HVF7   A0A088APU4   A0A0L7QLW9   A0A336MFB0   A0A1A9Y567   A0A1A9ZP16   A0A1B0GA73   A0A1I8NWY1   A0A1A9WKC5   A0A336MQU0   A0A0N0U318   A0A1B0BXV5   A0A1I8NB44   B3MAX2   A0A0L0CDX1   A0A3Q0IS33   A0A0Q9W9P9   A0A3B0KQR1   B5DH68   B4MUN0   A0A0J9R659   Q8SYF7   M9NDV5   A0A0R1E733   A0A1W4UG93   A0A0Q5VU67   A0A3L8D4D6   A0A336MFN0   A0A336L7J5   A0A336MKV3   A0A336LG78   A0A1L8D9H0   M9NFF0   A0A182INM3   A0A182RLD0  

KEGG

101735678    no KO assigned | (RefSeq) uncharacterized LOC101735678

GO

GO:0016021   GO:0000398   GO:0000974   GO:0061630   GO:0006281  

PANTHER

PTHR21706   PTHR43995  

Length:

283

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

63.09674

Exp number, first 60 AAs:

0

Total prob of N-in:

0.94084

inside

1  -  156

TMhelix

157  -  179

outside

180  -  193

TMhelix

194  -  216

inside

217  -  245

TMhelix

246  -  265

outside

266  -  283

 

 

Pi

5.115948

Theta

5.806701

Tajima's D

-1.078102

CLR

18.678123

CSRT

0.12124393780311

Interpretation

Uncertain