Gene

KWMTBOMO06047

Pre Gene Modal

BGIBMGA002841

Annotation

caspase-5_isoform_b_[Bombyx_mori]

Location

Bomo_Chr10(+):17036326-17038692      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.873

CDS

ATGCAAGAGGAGCACAAGAAAGCAATCCAGAGAAATTTCTCATCTCTGGTGGAGGGCACAGACTTAGATTCTATGGTGATGGCTCTCTATGAGAAGGGAGTGTTTTCCCAGCAAATGATAGAACCATACAGAGATACTAGTATCACACCTCGTGAACGGAAACGAATACTCTATAGAGAGATAACACGACGTGGGCCTCAGGCGTTCACAATGCTTCTAGAGGCTTTACGTGAGATGGGACACTGGGATTTGGTGCGTGACCTTGATCCAAACAGCCCACTACAACTGCGAGCCAGACGACCTGTTTTACCACCTAATCTTTCAGGACCTCAAGATAACTTTGTTAGTCTCACCATTGAAAAACACAAACCAAAAAATAACAATAATGAAATAATAAAACGTGAGTAA

Protein

MQEEHKKAIQRNFSSLVEGTDLDSMVMALYEKGVFSQQMIEPYRDTSITPRERKRILYREITRRGPQAFTMLLEALREMGHWDLVRDLDPNSPLQLRARRPVLPPNLSGPQDNFVSLTIEKHKPKNNNNEIIKRE

Similarity

Belongs to the peptidase C14A family.

Uniprot

G0XQH3   G0XQH2   E0D2V3   E9JEG3   H9J006   E9JEG4   + More
A0A0L7LJ92   A0A212FNV6   A0A194Q5C6   A0A0N1I6J1   H3JZW6   A0A023J7Q9   A0A2H4WW93   A0A059T1N6   R4I520   A0A286M5H6   A0A2H1WTM5   K7WJ03   M4NKN4   A0A2W1BPE7   G0XQH4   A0A2A4IXI5   A0A3B4B7U4   A0A3P9PDV8   H2V835   W0KA36   A0A1A8P3U7   H2V832   A0A3Q3MN39   A0A3Q3MN51   A0A0S7LLM1   A0A3Q4I4R9   A0A3Q1HME0   A0A087X4X5   C6ZH47   A0A3P8V8V7   A0A3B3YBX1   A0A3B3TZB4   A0A096MA32   A0A3B3D9Y2   A0A0S7LLM6   A0A3B3BQT0   A0A3B4Y0S6   A0A3B4Y8X4   A0A3Q1GMM0   A0A3Q4N8S5   A0A3Q2UKD0   A0A3B3U032   A0A146WL78   A0A146WNJ1   A0A1A8P9W9   A0A3B3WT87   A0A146WN64   A0A146WNY4   A0A3Q1AUQ9   A0A147A578   A0A3B4ZEG3   I3JHN4   A0A2R4LWB6   A0A3B1JD96   Q1AP00   A0A3S2PA27   A0A3Q2X0I2   Q1KZF4   A0A3B4ZEK0   A0A3Q2ZL10   A0A3P8QAM4   A0A3Q2ZLE8   A0A3P8QAA3   A0A3P8QAB9   A0A3B4G1U2   A0A2S1M5K4   A0A1A8BBA4  

Pubmed

21740565    21040523    19121390    26227816    22118469    26354079    + More
23743202    23474489    28756777    25463417    21551351    25186727    19887081    24487278    29451363    25329095    16780952    16989898   

EMBL

HQ328977    AEK20834.1    HQ328976    AEK20833.1    AB489117    BAJ16361.1    + More
GQ426280    ADM32506.1    BABH01018851    GQ426281    ADM32507.1    JTDY01000902    KOB75500.1    AGBW02004392    OWR55428.1    KQ459472    KPJ00210.1    KQ460784    KPJ12221.1    AB663140    BAL60586.1    KF365914    AHH02584.1    KY514095    AUD12126.1    KF030680    AHG99263.1    JQ768051    AFJ04535.1    KX827592    ASV64720.1    ODYU01010920    SOQ56332.1    JX840448    AFX60235.1    JX912275    AGG91491.1    KZ150039    PZC74600.1    HQ328978    AEK20835.1    NWSH01005463    PCG64196.1    KF738807    AHG06616.1    HAEI01001324    SBR75687.1    GBYX01162383    JAO90367.1    AYCK01023891    EU878545    EU878547    ACJ65024.1    ACJ65026.1    GBYX01162382    JAO90368.1    GCES01055595    JAR30728.1    GCES01055597    JAR30726.1    HAEH01005924    SBR77834.1    GCES01055594    JAR30729.1    GCES01055596    JAR30727.1    GCES01012657    JAR73666.1    AERX01037014    KY979512    CP026253    AVW89177.1    AWP09333.1    DQ025755    AAY88917.1    CM012443    RVE70235.1    DQ345775    DQ345776    ABC70998.1    ABC70999.1    MG241497    AWG72112.1    HADZ01000252    SBP64193.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000261520    UP000242638    UP000005226    UP000261640    UP000261580    UP000265040    UP000028760    UP000265120    UP000261480    UP000261500    UP000261560    UP000261360    UP000257200    UP000265000    UP000257160    UP000261400    UP000005207    UP000246464    UP000018467    UP000264840    UP000264800    UP000265100    UP000261460   

PRIDE

G0XQH3    G0XQH2    E0D2V3    E9JEG3    H9J006    E9JEG4    + More

Pfam

PF00619   CARD

Interpro

IPR033171   Caspase-9        + More
IPR029030   Caspase-like_dom_sf       
IPR015917   Pept_C14A       
IPR002138   Pept_C14_p10       
IPR002398   Pept_C14       
IPR011029   DEATH-like_dom_sf       
IPR001309   Pept_C14_p20       
IPR001315   CARD       
IPR033139   Caspase_cys_AS       
IPR042147   CARD_CASP9       
IPR016129   Caspase_his_AS       

SUPFAM

SSF47986   SSF47986        + More
SSF52129   SSF52129       

CDD

cd08326  CARD_CASP9
cd00032  CASc

ProteinModelPortal

G0XQH3   G0XQH2   E0D2V3   E9JEG3   H9J006   E9JEG4   + More
A0A0L7LJ92   A0A212FNV6   A0A194Q5C6   A0A0N1I6J1   H3JZW6   A0A023J7Q9   A0A2H4WW93   A0A059T1N6   R4I520   A0A286M5H6   A0A2H1WTM5   K7WJ03   M4NKN4   A0A2W1BPE7   G0XQH4   A0A2A4IXI5   A0A3B4B7U4   A0A3P9PDV8   H2V835   W0KA36   A0A1A8P3U7   H2V832   A0A3Q3MN39   A0A3Q3MN51   A0A0S7LLM1   A0A3Q4I4R9   A0A3Q1HME0   A0A087X4X5   C6ZH47   A0A3P8V8V7   A0A3B3YBX1   A0A3B3TZB4   A0A096MA32   A0A3B3D9Y2   A0A0S7LLM6   A0A3B3BQT0   A0A3B4Y0S6   A0A3B4Y8X4   A0A3Q1GMM0   A0A3Q4N8S5   A0A3Q2UKD0   A0A3B3U032   A0A146WL78   A0A146WNJ1   A0A1A8P9W9   A0A3B3WT87   A0A146WN64   A0A146WNY4   A0A3Q1AUQ9   A0A147A578   A0A3B4ZEG3   I3JHN4   A0A2R4LWB6   A0A3B1JD96   Q1AP00   A0A3S2PA27   A0A3Q2X0I2   Q1KZF4   A0A3B4ZEK0   A0A3Q2ZL10   A0A3P8QAM4   A0A3Q2ZLE8   A0A3P8QAA3   A0A3P8QAB9   A0A3B4G1U2   A0A2S1M5K4   A0A1A8BBA4  

PDB

3J9K     E-value=1.61928e-06,     Score=117

KEGG

100500764    K20009 caspase Dronc [EC:3.4.22.-] | (RefSeq) Nc, Casp-5, Dronc; Nedd2-like caspase

GO

GO:0042981   GO:0004197   GO:0006915   GO:0097200   GO:0043065   GO:0001822   GO:0048696   GO:0097205   GO:0008234   GO:0016021   GO:0005488   GO:0005515   GO:0008026   GO:0016818   GO:0004003   GO:0003677   GO:0000723   GO:0005634   GO:0006260  

PANTHER

PTHR10454   PTHR10454:SF157  

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01514

Exp number, first 60 AAs:

0.01476

Total prob of N-in:

0.48001

outside

1  -  135

 

 

Pi

16.855258

Theta

18.115683

Tajima's D

-0.29283

CLR

1.368507

CSRT

0.300034998250088

Interpretation

Uncertain