SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06042
Pre Gene Modal
BGIBMGA002860
Annotation
PREDICTED:_uncharacterized_protein_LOC105841811_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.551 Nuclear   Reliability : 1.885
 

Sequence

CDS
ATGCTCTGGGAAGGAGAAAGCAGATTGCGTGCTCACGTGTCGATCGTGTACTTGTTGGATCAAACCTTGGAGGCCGGTGGTGGGGGCGTGGTCAACCTGGATAGTCTAGAGGCAAAGATGGCGAATATCGAAGTGTCTCTGTCGGGTCCGCGGCGACGAAGCGCTGGAGCCCGTGACGTCACCAGGGAACTCGATGCGCTCCGGAATGCTCTTAGCGACAAAGATACATTAATACAAAGCTTGAAGAAACAACTCAGCGCTTCACTGAGCGCCGCGCGTTTGGCTGCTCAAGCTGCCTCTCCCCCCGCGTCCCGAGCTAGTTGCCATGAAGAGGCCGCCACACTGTCGCTAGAAGAACAAAGAGCACTAGAGGAACGTGCTGCAGCAGTCAAAGCAGACCTGGAGACTAGACGAGAGAATATACAAGAGTTGAGGAGACGGCTTGACAAGACTCACGTTACCGACAACATCGACACTAGGATCCAACAGGCAGAGCTGCAGTACAAGTTGGGACGTGAAGAGTTGGAGCTACTGACGTTGAGCGAACAGGCGCGGGCGCTGGCACAGCTCATAGAACAAGCAGAGGCGGCCGCAGAACGAAACATCAGGCCCACTCTATACAGGTATTAA
Protein
MLWEGESRLRAHVSIVYLLDQTLEAGGGGVVNLDSLEAKMANIEVSLSGPRRRSAGARDVTRELDALRNALSDKDTLIQSLKKQLSASLSAARLAAQAASPPASRASCHEEAATLSLEEQRALEERAAAVKADLETRRENIQELRRRLDKTHVTDNIDTRIQQAELQYKLGREELELLTLSEQARALAQLIEQAEAAAERNIRPTLYRY

Summary

EMBL
BABH01018858    NWSH01002699    PCG67660.1    ODYU01012542    SOQ58922.1    JTDY01008090    + More
KOB64748.1    KQ459472    KPJ00206.1    GECU01009091    JAS98615.1    AAAB01008900    EAA09397.4    APCN01002793    ATLV01026274    ATLV01026275    ATLV01026276    KE525409    KFB52973.1    AXCN02001018    GEDC01016178    JAS21120.1    GFDL01014234    JAV20811.1    GFDL01014293    JAV20752.1    GFDL01014299    JAV20746.1    KQ971372    KYB25361.1    GAPW01000478    JAC13120.1    JXUM01069005    JXUM01069006    JXUM01069007    CH477383    EAT42161.1    DS231813    EDS25770.1    KK854305    PTY14426.1    AXCM01008451    LJIG01001073    KRT85867.1    QOIP01000010    RLU17800.1    KK107167    EZA56334.1    NEVH01011885    PNF31299.1    KQ983211    KYQ46645.1    KQ977873    KYM99124.1    ADTU01011781    ADTU01011782    ADTU01011783    ADTU01011784    ADTU01011785    ADTU01011786    KQ979962    KYN18436.1    NNAY01000685    OXU26984.1    KQ414612    KOC69126.1    KQ981727    KYN37095.1    KQ761679    OAD57174.1    KZ288344    PBC27670.1    GEZM01074400    JAV64568.1    KQ976396    KYM92858.1    UFQT01000279    SSX22700.1    GDIQ01243539    JAK08186.1    KQ434842    KZC08103.1    GL764132    EFZ18254.1    GL888912    EGI57390.1    QCYY01002897    ROT66727.1   
Pfam
PF17820   PDZ_6
Interpro
IPR036034   PDZ_sf        + More
IPR001478   PDZ       
IPR041489   PDZ_6       
SUPFAM
SSF50156   SSF50156       

Ontologies

GO

Topology

Length:
209
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01866
Exp number, first 60 AAs:
0.01866
Total prob of N-in:
0.06791
outside
1  -  209
 
 

Population Genetic Test Statistics

Pi
25.046739
Theta
23.578482
Tajima's D
0.065525
CLR
1.213735
CSRT
0.392030398480076
Interpretation
Uncertain
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