Gene

KWMTBOMO06034

Annotation

PREDICTED:_post-GPI_attachment_to_proteins_factor_3_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(-):16830714-16836815      View in EpiBrowser

Full name

Post-GPI attachment to proteins factor 3      

Location in the cell

PlasmaMembrane   Reliability : 4.752

CDS

ATGGGATCCTTAAAAATAACTTTAGTTACAGTATTTATTTTAAGTTGTAAATTGAGTCAGTTATCGGCGAGCGAAGGCGATCGCTTGTACATATATAAAGATTGTCTCAAACGATGCATATCGAGGAATTGTGATGAAAATGGCCTTTTGTTCAGACAGAATACAACAATACAACAGGATTTCTGGTGTAGGCTCTTCAGTTGGCGATGCATAGACGAGTGCAAGTATCATTGCATGTGGTCTGCTGTAAAGAAATTAGAGAATGCTGGTCGGCAAGTAGTCAAGTTTCATGGCAAGTGGCCATTCAAACGGATTATGGGTATGCAAGAGCCCGCATCGGTATTTGCATCTCTACTCAATTTGTTAGCAAACGCATACATGTATTCCAAATTAAGGACGGAGTTTTCAATCAAATCGAGACCTATGGTGTTACTGTGGCATTTATTTGCTCTTGTGTGCATGAACGCGTGGGTATGGTCTATGGTGTTCCACACAAGGGATACTCCGTTCACAGAGTTCATGGACTACACGTGCGCCCTGTCCATGGTCATGGGGCTGTACGTTGCTGCTGTTGTGAGAATATTGCATAGTCAGAAGAAGATCGTAGCGACGCTGCTGACGGGCTCGTTGCTGTACTTCGCGACGCACGTGCGGCTGCTGGCCACCGGGGTGGTTGACTACGACTACAACATGACCGTCAACGTTATCTTCGGCGCGGTGGGTTCGTTTATCTGGCTGGTGTACGCGGGGTACCTGAGCGCGAGAGGCTCCCGCTACTCGTCGCGCATGCTGTGGTTCGTGACGTGCTCCGCGGTCGTGCTGCCGCTGGAGCTGCTGGACTTCCCGCCGGTCCGCCGCGCGTGGGACGCGCACGCCGTGTGGCACCTCAGCACCGCGCCGCTGCCCCTGCTCTTCTACCAATTCGTGATTGAAGATCTCCGTTATACGCAGAGCAGACAAGACAAACTTTTGTAA

Protein

MGSLKITLVTVFILSCKLSQLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLFSWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCSAVVLPLELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIEDLRYTQSRQDKLL

Description

Involved in the lipid remodeling steps of GPI-anchor maturation.

Similarity

Belongs to the PGAP3 family.

Keywords

Alternative splicing   Complete proteome   Glycoprotein   Golgi apparatus   GPI-anchor biosynthesis   Membrane   Reference proteome   Signal   Transmembrane   Transmembrane helix  

Feature

chain  Post-GPI attachment to proteins factor 3
splice variant  In isoform 2.

Uniprot

H9J029   A0A2A4J571   A0A3S2NBR6   A0A0N1INJ4   A0A194Q3T1   A0A212FNX3   + More
S4PHV3   A0A2J7PTV8   Q17BP3   A0A182R2P6   A0A1Y1KMX7   A0A1Q3FDM9   A0A1Q3FDD9   A0A182SVA0   A0A1L8DY18   A0A182NH02   A0A182PJU8   B0X469   A0A182YNP6   A0A182WAP4   A0A182Q669   A0A084W9V9   A0A182H976   A0A182TIW7   A0A182VLM2   A0A182KW63   A0A182M7J0   A0A182HMC1   D6WZ63   A0A182FE76   A0A1A9WK28   A0A1A9ZP88   A0A182KA89   A0A1B0BR45   W5JE17   A0A0K8U627   A0A1A9VX77   W8B0W0   A0A1A9Y6B7   A0A182IMW0   A0A2M4BTN4   B4QDB0   A0A0K8UEK6   A0A0J9TUD3   B4HPW9   B4P0Z4   A0A067RI62   A0A1W4V1Y9   Q7K0P4-2   B3NB41   Q7Q7B9   B3MJ36   A0A1B0BR44   A0A182XCZ3   A0A0Q9X7X0   A0A293M884   A0A293MCE8   B4KNJ1   A0A1B6LFA3   Q292Z9   A0A1I8PIA6   A0A1A9Y6B6   B4GC69   A0A1B0CZY4   A0A3B0J0J3   A0A336LRU6   B4LK02   A0A226E3G5   A0A195FQ21   X2APN1   A0A195BVJ8   A0A154P0I0   A0A088AD91   A0A0Q9X817   A0A0N7ZB59   Q7K0P4   A0A3L8DFA3   A0A1B0GJF7   E1ZZE3   A0A1Z5L5V5   A0A151WT09   A0A1B6H762   V5H3B7   B7Q0M2   A0A1I8ML33   A0A131XUF5   V5IFK0   A0A0L0C577   A0A1E1XMH9   A0A0P4W320   A0A147B951   B4J6I8   A0A1B0GDL0   A0A0K2TKU7   A0A2S2R509   J9JJ61   A0A0M4EL04   A0A1B6E938   A0A1E1X9I5  

Pubmed

19121390    26354079    22118469    23622113    17510324    28004739    + More
25244985    24438588    26483478    20966253    18362917    19820115    20920257    23761445    24495485    17994087    22936249    17550304    24845553    10731132    12537572    12537569    17893096    12364791    18057021    15632085    23254933    30249741    20798317    28528879    25765539    25315136    26108605    29209593    28503490   

EMBL

BABH01018868    BABH01018869    NWSH01003313    PCG66580.1    RSAL01000262    RVE43322.1    + More
KQ461186    KPJ07369.1    KQ459472    KPJ00198.1    AGBW02004392    OWR55413.1    GAIX01005680    JAA86880.1    NEVH01021221    PNF19767.1    CH477319    EAT43670.1    GEZM01078374    JAV62752.1    GFDL01009370    JAV25675.1    GFDL01009492    JAV25553.1    GFDF01002746    JAV11338.1    DS232330    EDS40146.1    AXCN02000347    ATLV01021955    KE525326    KFB47003.1    JXUM01120192    KQ566369    KXJ70175.1    AXCM01000092    APCN01004400    KQ971372    EFA09753.2    JXJN01018905    ADMH02001764    ETN61145.1    GDHF01030210    JAI22104.1    GAMC01019629    GAMC01019625    GAMC01019615    GAMC01019609    JAB86926.1    GGFJ01007268    MBW56409.1    CM000362    EDX05897.1    GDHF01027293    JAI25021.1    CM002911    KMY91765.1    CH480816    EDW46638.1    CM000157    EDW89068.1    KK852619    KDR20100.1    AE013599    AY069668    CH954177    EDV59806.1    AAAB01008960    EAA11398.4    CH902619    EDV38130.1    CH933808    KRG04380.1    GFWV01011509    MAA36238.1    GFWV01013080    MAA37809.1    EDW08950.2    GEBQ01017614    JAT22363.1    CM000071    EAL24712.2    CH479181    EDW31387.1    AJVK01021142    OUUW01000001    SPP74177.1    UFQS01000063    UFQT01000063    SSW98893.1    SSX19279.1    CH940648    EDW61656.1    LNIX01000007    OXA51820.1    KQ981335    KYN42578.1    AMQN01000124    KQ976401    KYM92649.1    KQ434787    KZC05343.1    CH964282    KRG00248.1    GDRN01089010    JAI60736.1    QOIP01000009    RLU19064.1    AJWK01020252    AJWK01020253    GL435343    EFN73435.1    GFJQ02004174    JAW02796.1    KQ982769    KYQ50931.1    GECU01037197    JAS70509.1    GANP01013039    JAB71429.1    ABJB010048540    ABJB010933854    ABJB011009130    DS833048    EEC12394.1    GEFM01005928    JAP69868.1    GANP01008302    JAB76166.1    JRES01000975    KNC26599.1    GFAA01003138    JAU00297.1    GDRN01089009    JAI60737.1    GEIB01000650    JAR87309.1    CH916367    EDW01989.1    CCAG010011939    HACA01008921    CDW26282.1    GGMS01015239    MBY84442.1    ABLF02028352    CP012524    ALC42167.1    GEDC01002871    JAS34427.1    GFAC01003437    JAT95751.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000235965    UP000008820    UP000075900    UP000075901    UP000075884    UP000075885    UP000002320    UP000076408    UP000075920    UP000075886    UP000030765    UP000069940    UP000249989    UP000075902    UP000075903    UP000075882    UP000075883    UP000075840    UP000007266    UP000069272    UP000091820    UP000092445    UP000075881    UP000092460    UP000000673    UP000078200    UP000092443    UP000075880    UP000000304    UP000001292    UP000002282    UP000027135    UP000192221    UP000000803    UP000008711    UP000007062    UP000007801    UP000076407    UP000009192    UP000001819    UP000095300    UP000008744    UP000092462    UP000268350    UP000008792    UP000198287    UP000078541    UP000078540    UP000076502    UP000005203    UP000007798    UP000279307    UP000092461    UP000000311    UP000075809    UP000001555    UP000095301    UP000037069    UP000001070    UP000092444    UP000007819    UP000092553   

PRIDE

H9J029    Q7K0P4   

Pfam

PF04080   Per1        + More
PF00160   Pro_isomerase

Interpro

IPR007217   Per1-like        + More
IPR020892   Cyclophilin-type_PPIase_CS       
IPR029000   Cyclophilin-like_dom_sf       
IPR002130   Cyclophilin-type_PPIase_dom       

SUPFAM

SSF50891   SSF50891       

Gene 3D

2.40.100.10    

ProteinModelPortal

H9J029   A0A2A4J571   A0A3S2NBR6   A0A0N1INJ4   A0A194Q3T1   A0A212FNX3   + More
S4PHV3   A0A2J7PTV8   Q17BP3   A0A182R2P6   A0A1Y1KMX7   A0A1Q3FDM9   A0A1Q3FDD9   A0A182SVA0   A0A1L8DY18   A0A182NH02   A0A182PJU8   B0X469   A0A182YNP6   A0A182WAP4   A0A182Q669   A0A084W9V9   A0A182H976   A0A182TIW7   A0A182VLM2   A0A182KW63   A0A182M7J0   A0A182HMC1   D6WZ63   A0A182FE76   A0A1A9WK28   A0A1A9ZP88   A0A182KA89   A0A1B0BR45   W5JE17   A0A0K8U627   A0A1A9VX77   W8B0W0   A0A1A9Y6B7   A0A182IMW0   A0A2M4BTN4   B4QDB0   A0A0K8UEK6   A0A0J9TUD3   B4HPW9   B4P0Z4   A0A067RI62   A0A1W4V1Y9   Q7K0P4-2   B3NB41   Q7Q7B9   B3MJ36   A0A1B0BR44   A0A182XCZ3   A0A0Q9X7X0   A0A293M884   A0A293MCE8   B4KNJ1   A0A1B6LFA3   Q292Z9   A0A1I8PIA6   A0A1A9Y6B6   B4GC69   A0A1B0CZY4   A0A3B0J0J3   A0A336LRU6   B4LK02   A0A226E3G5   A0A195FQ21   X2APN1   A0A195BVJ8   A0A154P0I0   A0A088AD91   A0A0Q9X817   A0A0N7ZB59   Q7K0P4   A0A3L8DFA3   A0A1B0GJF7   E1ZZE3   A0A1Z5L5V5   A0A151WT09   A0A1B6H762   V5H3B7   B7Q0M2   A0A1I8ML33   A0A131XUF5   V5IFK0   A0A0L0C577   A0A1E1XMH9   A0A0P4W320   A0A147B951   B4J6I8   A0A1B0GDL0   A0A0K2TKU7   A0A2S2R509   J9JJ61   A0A0M4EL04   A0A1B6E938   A0A1E1X9I5  

KEGG

101747060    no KO assigned | (RefSeq) post-GPI attachment to proteins factor 3

GO

GO:0016021   GO:0000139   GO:0006506   GO:0016788   GO:0031227   GO:0006505   GO:0003755   GO:0006457  

PANTHER

PTHR13148  

Subcellular location

Golgi apparatus membrane  

SignalP

Position:   1 - 23,         Likelihood:  0.973212

 

 

Length:

324

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

133.90092

Exp number, first 60 AAs:

0.21825

Total prob of N-in:

0.12065

outside

1  -  110

TMhelix

111  -  128

inside

129  -  140

TMhelix

141  -  163

outside

164  -  172

TMhelix

173  -  195

inside

196  -  201

TMhelix

202  -  221

outside

222  -  230

TMhelix

231  -  253

inside

254  -  324

 

 

Pi

16.640964

Theta

15.84963

Tajima's D

0.665943

CLR

1.255663

CSRT

0.566171691415429

Interpretation

Uncertain