SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06032
Pre Gene Modal
BGIBMGA002833
Annotation
Uncharacterized_protein_OBRU01_15439_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.8
 

Sequence

CDS
ATGACCTTGCGCACTCCACGCCGCCGTATCTCACCACGTACCAAGCACAGGTACCGCGTCATAAGGAATTTCTTTCGACGTGCATTGGGTACTTCATCACAACCATCCATAAAGATAAGCTCCAGTATCGCGATCAACGTCACCGACTTGAGACATAGATTGGGTGGCATCCAAAATCAATTGAATGAAGCGACCAGACATTGCCAAGATATTAGCTACTTAGAGAATATCTCAAAGCCTTCTAGTAACGTGACTGAGCTCAAACAAGTACCTTCATCTTCAAAACATCAGATAGAACAAAGTGTACAGGGACAATATAACGAAAGCGAAGCTAAAGTACTCTACAAAACATCGGAGAATAACTTTCCGAGTTCAGATCCAAGTGATCAGACGCCCAAAAGTCAGGATCATGATGACAATAACCGTTGCACTGAAGTGTCGCGTGTAGATAGCAAAACATCGCGCACGAAGAAAAAAAAGAATAAATTAAAGTATACAGTAGTGCCTGATGAATCAGTTTTACGAAGTCATAAAACGAAATCTGCCCTCGAAAACGTTGTGGCAACTAATTCTACTGATAGCTACGAGTCGACTGCCGGTCACAGGATGGCCCAACGTGCACACGCGGGAGACTGCAACCGTCAACACCATAGAGCAAATATAGACCACGCTTACAAAGGCAGATCAGAATCCTTGCATGAACGAAAAGAGAAAGGACATCATAGACAAAAAATCATGAATAACAACCGTGACTTGGATAATGAATTTATAGCAGATATAATTAGGAGACAATACAAACCTGTTAAATTGTTTGGCAGAAAAGAATCGGATTTCAGCCAACTATCCGCGCCTGTGTGCCGAGACCAAGAATATTCATATAACAATTATTTTGGTGACTGCAGTGAGCTGTGCTCGTGTTGCTACGATTCAAACAGATCTAAATACAAAAGACATATCGACTTGTCTGACATGAGAAGTATTTGCGACACAAGATTGTACAGTTCCAATAAAGCTAAAATCAAAACTCGCAGGAGATATATGGAAGCTCAAAATGATTCCGAACTCTACGACTTGATACCGGTAAAAGAGAAATCTAGCCCCAAATCGAGGAGGAAGTTTGCTGAAGATAACATCAGGTATCATTATTATAAAGAAGTACCTCCGTCGCCTAGAACGCATAGACCTCAATTAAATCTTAAGGCGCAACATTACGAAGATTACTTTTATCATCACCAAAGAAAATCTAGATCACCAAACAGACACGAGAGAAATGTAAAAGAAATTTTTGAAAGTGATCTTTCTTCTGAAACGCCACAGGCTATAGAGAGCGGCCGTCGTCAAATGAAAACTACAAATATGGCTAATGCGCCAGAACACCCTAGGAACGAAAGTGGAACATTAAATAGCCGACCAAATACATACATAGAAGATCAAACATGTCACGAAACACACTTAAACAAAACACAAGACACCGATATGTCCACAGACAAAACGGACAGAGCATTATGCGAAATTAAGGATATCTTACAGAGTTTTCTGCAAGAAATAAAAAAAGAAGCTACGGTATCGCAATGCGAGAAGTCGGACGTCACAAGTAAAGCAGCCGGTAATGTGCCTAATAATATACAACTAAATAGCACTAACGCCAGTATGCTACCAAACAGCGGGCCAAGCTTCAACTACAGCAATCAAGCAAACATCCCTCCGTACATTCCGGCTTTTACCAATCCGTGCTGCTACCCAATACTGCCGGTGTGCCCAATGAATTGCATACAGAATGGATACGTCGTGCCGTCGCCAAGTTACACATGCGCTAACTGCACTAAAGATGAAAAATCAAAAATTTCAAATAGCAAAGTTTGCAGTTCTGAAACGGAAGAGCTTATTAAAGAAATATATAAGCATGTACTGGAGACACCTGGTAGTAGAAAAAAGGAGACATCAAGAGACGAAAACAAAAGAATTCTGACGTCCAGAAGTGTTGGAGGTAGTATGCGCACCTCTAAGCGCGACGTCAAAATCGGGACGCCTAAATTGAAGTGTTATTCAAAGAGTTGCGAAGCTATTACGCCGAGAATGGCAGGCAACTATTACGATGGAACGTACGCGAGTTATTCAGACACACTGCTAGAAAGATTGAGTATAGAACCGACGCCAAGCGAAACAGTTTCAGAAACTGATTTTACAATGGAATCTATGTCCACTGAAAAGGGTAAACGTAATAAATTCGCGAAAGTCCTACGATCATTCGGACTCTTCAGAAAGAAAAAAGACGTTATAGAGGAACTGAGCGAGAGTGAAAGTACTGTGGAAGTGGATGTCAAACCGAAGTCACCGCCTTTCAGACAAAACATCACTAACTACGCAATGTACGAGCAGGAATACCACCACCGACCTCCGATTCCACCGCATCCTTATCACGAGTATCCAGAATACCGACCGCCTTTTCAACAAAACTTACCACCAACACAAGATCCATATCACCCTCACTCTTATTCGCATATGCCATACGATCCCACCTACCCTCCGCATCCTCAATACCCAAGACCAGGAATGCCAATGCCACGAAGTCGGTCGTTCGATCATCACGTACCTAACGTGCCGCTCTGCCTAAAAGAGATCGAAGTTAAAAGCACAGCGACGCAGAGCGAAAGGAAAATGTCATTCTTCGAGAGAATGAAGACCAAAATGCAAATGGAACAAGCGCGCAGAGACGAATATCAAAGGAACTGTTCAACTCAGACCAAACAAAATGTAACCGAAGATCAAACAAAACCGGGTTTGTTTAACTGGAAGAATGTCCAACCGAAGCCTCTCAATAAAGATCCGCTTGCGTTTTCCTACTTGAAACAGAAGCAACTAGCTGAAGGAGATGTAAAGATGAGAAATGCACTACTCAAGAAGTTATTTTACAAAAGAAATCCATTTTCTCCAAGGAACTTGATAGTGAGGACTCTGCTCGGTAAAGACAAGTCGAGTTACGGGGAACCGCCAGCTATATACCGGCCAAAGTTGTTCTTGTGA
Protein
MTLRTPRRRISPRTKHRYRVIRNFFRRALGTSSQPSIKISSSIAINVTDLRHRLGGIQNQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHDDNNRCTEVSRVDSKTSRTKKKKNKLKYTVVPDESVLRSHKTKSALENVVATNSTDSYESTAGHRMAQRAHAGDCNRQHHRANIDHAYKGRSESLHERKEKGHHRQKIMNNNRDLDNEFIADIIRRQYKPVKLFGRKESDFSQLSAPVCRDQEYSYNNYFGDCSELCSCCYDSNRSKYKRHIDLSDMRSICDTRLYSSNKAKIKTRRRYMEAQNDSELYDLIPVKEKSSPKSRRKFAEDNIRYHYYKEVPPSPRTHRPQLNLKAQHYEDYFYHHQRKSRSPNRHERNVKEIFESDLSSETPQAIESGRRQMKTTNMANAPEHPRNESGTLNSRPNTYIEDQTCHETHLNKTQDTDMSTDKTDRALCEIKDILQSFLQEIKKEATVSQCEKSDVTSKAAGNVPNNIQLNSTNASMLPNSGPSFNYSNQANIPPYIPAFTNPCCYPILPVCPMNCIQNGYVVPSPSYTCANCTKDEKSKISNSKVCSSETEELIKEIYKHVLETPGSRKKETSRDENKRILTSRSVGGSMRTSKRDVKIGTPKLKCYSKSCEAITPRMAGNYYDGTYASYSDTLLERLSIEPTPSETVSETDFTMESMSTEKGKRNKFAKVLRSFGLFRKKKDVIEELSESESTVEVDVKPKSPPFRQNITNYAMYEQEYHHRPPIPPHPYHEYPEYRPPFQQNLPPTQDPYHPHSYSHMPYDPTYPPHPQYPRPGMPMPRSRSFDHHVPNVPLCLKEIEVKSTATQSERKMSFFERMKTKMQMEQARRDEYQRNCSTQTKQNVTEDQTKPGLFNWKNVQPKPLNKDPLAFSYLKQKQLAEGDVKMRNALLKKLFYKRNPFSPRNLIVRTLLGKDKSSYGEPPAIYRPKLFL

Summary

Ontologies

GO

Topology

Length:
1007
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05856
Exp number, first 60 AAs:
0.05856
Total prob of N-in:
0.00264
outside
1  -  1007
 
 

Population Genetic Test Statistics

Pi
16.266154
Theta
13.36366
Tajima's D
0.874754
CLR
0.866535
CSRT
0.63906804659767
Interpretation
Uncertain
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