SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06022
Pre Gene Modal
BGIBMGA002827
Annotation
Carbonyl_reductase_[NADPH]_1_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.288 PlasmaMembrane   Reliability : 1.042
 

Sequence

CDS
ATGTGCAACGTAGCGCTGGTCGTCGGCGCCGCAAGCAACCTCGGATACCAAGTCTTAAAAAAACTCACAGAGACTCACAAAGGAAAAATCTACTTCACTACAGAAGATGACACAGCCGGCTTCAACATTCTCAAGAGCCTGGAGAGGCCCGACATCGAAATCAGCTACTTGCAAATGGACATCACGTATACAAAGAGCATCATCAGACTGAGGCACTACATCCAGGATCTAGACGAAAGGATCGATTTGCTGATAAACATCACCGATTATGTGGCAGAGAAGAATTTATCGAATTTCGAAAAAATCCGACGAACTTTAAGCGTTAACTTCTACGGATACATAAACTTTGGGAAACTTGTGTACCCGCTGCTGAACGAGAACGCTAGAGTCGTAAACGTGTCCGGGCCAGCCGGTCTTCTAGCCACAATCGAAAACGAAGATATAAGAAAGAGAATCAGCGATCCCACATTGACAGAAGATGAACTGGTCGCTTTAATCCAAGAATACGAACACGCCGCAAGAAGGGGAGTAGAGAAGACTGAAGGTTGGGGCATGAATGTACATGCCGTGAGCAAAGTCGCATTAAACGCTGTAACCTTCCTACAGCACAGGGAATGGGCTGATAAAGGGATTATAATCAACTGTGTAAACCCTGGAAGCTTGAGCGGTCGTGACGGAAGAAGAACTACTAAGATATACGAGGAGGGAGCCAAGGCCATACTGTATCTAGCTCTAGAAGCACCGTTAAGCTTAAAAGGGAATTTCGTTTGGAGCAATTATTCGGTGATTGAGTGGAATTCGGATCCGTACGTGGAAGTTACGACAGTATGA
Protein
MCNVALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPLLNENARVVNVSGPAGLLATIENEDIRKRISDPTLTEDELVALIQEYEHAARRGVEKTEGWGMNVHAVSKVALNAVTFLQHREWADKGIIINCVNPGSLSGRDGRRTTKIYEEGAKAILYLALEAPLSLKGNFVWSNYSVIEWNSDPYVEVTTV

Summary

Similarity
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
EMBL
BABH01018881    NWSH01007020    PCG63130.1    NWSH01007205    PCG63040.1    JTDY01011599    + More
KOB55247.1    ODYU01000610    SOQ35699.1    KQ459472    KPJ00188.1    KQ461186    KPJ07379.1    AGBW02004392    OWR55402.1    GECZ01017087    GECZ01016387    JAS52682.1    JAS53382.1    BABH01037460    JTDY01008746    KOB64420.1    GECU01027825    GECU01017498    JAS79881.1    JAS90208.1    ODYU01005228    SOQ45880.1    KQ460466    KPJ14621.1    SOQ45879.1    KQ459597    KPI95235.1    KQ458565    KPJ05804.1    BT126771    AEE61733.1    GBBK01003249    JAC21233.1    GEFH01004098    JAP64483.1    GALX01002952    JAB65514.1    GFPF01006553    MAA17699.1    NWSH01006830    PCG63222.1    GFJQ02007744    JAV99225.1    GACK01007031    JAA58003.1    GACK01005752    JAA59282.1    KQ459601    KPI93721.1    KK120274    KFM77920.1    BT126507    AEE61471.1    KK853628    KDR03826.1    GEZM01088470    JAV58180.1    GBBM01002051    JAC33367.1    GFPF01006552    MAA17698.1    KQ461196    KPJ06479.1    NEVH01019373    PNF22703.1    GBBM01002052    JAC33366.1    GFWV01003337    MAA28067.1    GEBQ01010531    JAT29446.1    GFAC01003037    JAT96151.1    GFPF01005493    MAA16639.1    JO844144    AEO35761.1    KQ971352    EFA07299.1    GBBM01002050    JAC33368.1    GGLE01006223    MBY10349.1    GECZ01027302    JAS42467.1    GEDV01003386    JAP85171.1    KK854031    PTY09833.1    CAEY01000925    APGK01025878    KB740605    ENN80024.1    GAIX01003872    JAA88688.1    GEDC01025309    JAS11989.1    GECU01015736    JAS91970.1    GBBK01005242    JAC19240.1    GEBQ01024723    JAT15254.1    ODYU01011824    SOQ57785.1    KPJ14619.1    MNPL01009531    OQR73668.1    ODYU01003722    SOQ42855.1    GADI01004071    JAA69737.1    ACPB03015037    GAHY01001144    JAA76366.1    GDKW01001428    JAI55167.1    GEFM01004999    JAP70797.1    GGMS01012953    MBY82156.1    GBBM01002053    JAC33365.1    GEBQ01006036    JAT33941.1    BABH01038482    KQ414657    KOC65686.1    ODYU01010279    SOQ55272.1    GFPF01005492    MAA16638.1    GADI01006938    JAA66870.1    JO842026    AEO33643.1    MNPL01010913    OQR72857.1    AGBW02008280    OWR53834.1    ODYU01011980    SOQ58033.1    GBBI01001358    JAC17354.1    GEDC01027847    GEDC01011823    JAS09451.1    JAS25475.1    HQ005775    ADV40071.1    AGBW02009105    OWR51675.1    APGK01054937    KB741253    KB632340    ENN71824.1    ERL92968.1    AGBW02009113    OWR51645.1    QCYY01001430    ROT78111.1    GEDC01025189    JAS12109.1    GEFH01002778    JAP65803.1    GEZM01008630    JAV94726.1    ABLF02035864    KQ434825    KZC07366.1    IAAA01002236    IAAA01002237    LAA00596.1    GDIQ01245914    GDIQ01172784    GDIP01056074    LRGB01002384    JAK05811.1    JAM47641.1    KZS07833.1    ABLF02035856    ADTU01007360    LSMT01000100    PFX27596.1    KZ288282    PBC29609.1    NEDP02002316    OWF51186.1    REGN01012917    RMZ94625.1    ROT78110.1    GALX01005443    JAB63023.1    JTDY01002114    KOB72078.1   
Pfam
PF00106   adh_short
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
SUPFAM
SSF51735   SSF51735       
PDB
1N5D     E-value=1.82861e-22,     Score=260

Ontologies

Topology

Length:
276
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12471
Exp number, first 60 AAs:
0.05443
Total prob of N-in:
0.03026
outside
1  -  276
 
 

Population Genetic Test Statistics

Pi
28.607603
Theta
18.205404
Tajima's D
1.586212
CLR
0.507253
CSRT
0.812009399530023
Interpretation
Uncertain
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