SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06008
Annotation
PREDICTED:_uncharacterized_protein_LOC106142274_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.083
 

Sequence

CDS
ATGAGAAGTTCAGGATATGAACAAAATACAACAGAGTATAGACAATCGATTAAATGCAAAACTATAGTGGATTATGTTTTTTTAAAGAAATTGAAAGAATTTGATGAAGAGAGGAAGACGTTAAAAAGTTTTCTAATGACTGCCTTAAATGAAAATAGAAGAATCAGAATGCAATATCAATTACAGGTTATGGCGAAAGATAGATTTAAACGTTACAATGAAGATTCTCAAAAACTGATTAAAGAGAATAGATTTAAATGCATACATTTACAGCAATTGTATTGGGTGGCACAGCAAGAAAATTTATTTCTTAAAAAATTAGTACAGAAACTTCAGGAAGCCAAGAAAGAGGCTGATTTGAATTGCGTATGTTTGATCAATGAAATTAATAAGTCCAGTGATGAGAAACTTAAAGCGAATTGTCGCAATTTCGTGACGACCAAAGATGTTTCTTTGAATTCTGACCTAATTGATGTAAGACAATCAATTTTGCAACAATGCAACGGATCAAACAATACTTTCAATAAAAATGAGTTCAGTACTATGAAAAGGCAAGAATATACCAGCATTACAGAGCTGAAGCAAGATAATCATTCTTTATTACGTCCGCGCACAGTCGTTTCAAGATTTTCCGGGGAATACTTTTGGACTGTGAAAGATAAGAATGGTAAAATAGAAAAACTTTACGATTACAGTTGTCAATCAGTTGGTAACTGTGATGTAATTCACAGAATACGTCAATACACCGTTTATTACGATAAGGATTATCTTTTAGATTTTACAAAATCTAATACGTCGAACAGTGATGTTACGGATCACACATCCAAGCTTTACAAGCAACTTCCACCAATAAATAATCGATTTTTAACTGGGTCGGAGGAGTTTCACAATTTTATGAAGAATAACAAAGGTGTTATTTTACCATTTCGGAAATCATAA
Protein
MRSSGYEQNTTEYRQSIKCKTIVDYVFLKKLKEFDEERKTLKSFLMTALNENRRIRMQYQLQVMAKDRFKRYNEDSQKLIKENRFKCIHLQQLYWVAQQENLFLKKLVQKLQEAKKEADLNCVCLINEINKSSDEKLKANCRNFVTTKDVSLNSDLIDVRQSILQQCNGSNNTFNKNEFSTMKRQEYTSITELKQDNHSLLRPRTVVSRFSGEYFWTVKDKNGKIEKLYDYSCQSVGNCDVIHRIRQYTVYYDKDYLLDFTKSNTSNSDVTDHTSKLYKQLPPINNRFLTGSEEFHNFMKNNKGVILPFRKS

Summary

Pfam
PF10231   DUF2315
Interpro
IPR037151   AlkB-like_sf        + More
IPR018796   APOPT       
Gene 3D

Ontologies

Topology

Length:
312
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07067
outside
1  -  312
 
 

Population Genetic Test Statistics

Pi
19.09263
Theta
20.616858
Tajima's D
-0.305802
CLR
0.678378
CSRT
0.295485225738713
Interpretation
Uncertain
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