Gene

KWMTBOMO06000

Annotation

PREDICTED:_germinal-center_associated_nuclear_protein_[Amyelois_transitella]

Location

Bomo_Chr10(-):15970893-15975027      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.144

CDS

ATGTCCTCGTATTTTGATTATTTTTGTACGCACATAGAAAAAAATTCGGATACTATTAGAGGAACTTGTAATTCTATGTGCCCAGATGAAGAGGTTATTTTAAGAGAAAGGGAGGATTTAGTTCATGTACTGGAGGTACTGGGACCAATAAGAAAATATGTGAAAAGCTACAGTAGATCAGCAGCTGACACCAACATCGCAAAACCGAACCTGCTTAGACCATATTCTGTACTGATTGATACCTTGCATTATCTACTGCTTGAAGTAACAAAAAGGAAAGAAGTGTCCTCAGTGATGGTTTATGACTTTGTGAATGACAGACTAAGGGCTATAAGACAGGACATGACAATACAGAGATTACCTCCTGAACAATGTGTTAAATTATTGGAACCGATGATTCGTTTTTATGTTTACTATGGATACAAATTTTCCAATCTTTCTACAAAAGGATTTGATTCTGACTTGAACAAAAAATATTTATTAGAGTGCATTAAATGGTTTCTAAGTTGCATTGACACAATGGATCTGTCCACTAACAGAAATATTGATTTACTCTCTGATTTTATTTCAAATTTAAACATAAAAAATGTAAGAAGATACAGATTGGGTTATGACAGAGTTTTAATGGAGTGTTTGTATATATTGTGTAATCTAGATGATGTCCACCCTTTATATAGATATTTGAATTTTTCAAAGGATTTGAAAAGTGACCCAAGATTAAATTTGGCATTTAAAATTGCGATAGCAAATATGAAAGGAAATTATATTAAAATATTCAAATCAATGAAGACCCTATGTCCTCTGAGCTATTGTGCTTTGTGCACATATATGCCGGTGCTGCAAAGGAAAGCATTACTAACATTAGCCCATGCATATAACAGCAAAAAGTTTGTAGTGCCAATCGAAGTTATAACACGTTGGTTGAGGTTATCGAGCAATAGGGACACAATAAAGGTGTGCTCCCACTATGGAATAAAGACCGAAGGAAACAATATCCTCTTCAATAAGGGGGAGTTTAAAACTGATGCTTTTTTGCACCAAACCAGTTTAGAAGATGACACAATGAAGCATCTAGATTTAAGTGTAGACAATATTTTTACATATAGTTCTTGA

Protein

MSSYFDYFCTHIEKNSDTIRGTCNSMCPDEEVILREREDLVHVLEVLGPIRKYVKSYSRSAADTNIAKPNLLRPYSVLIDTLHYLLLEVTKRKEVSSVMVYDFVNDRLRAIRQDMTIQRLPPEQCVKLLEPMIRFYVYYGYKFSNLSTKGFDSDLNKKYLLECIKWFLSCIDTMDLSTNRNIDLLSDFISNLNIKNVRRYRLGYDRVLMECLYILCNLDDVHPLYRYLNFSKDLKSDPRLNLAFKIAIANMKGNYIKIFKSMKTLCPLSYCALCTYMPVLQRKALLTLAHAYNSKKFVVPIEVITRWLRLSSNRDTIKVCSHYGIKTEGNNILFNKGEFKTDAFLHQTSLEDDTMKHLDLSVDNIFTYSS

Uniprot

A0A2H1WX30   A0A2A4JM29   A0A194QRP4   A0A194Q495   A0A212EHM4   A0A1B6J253   + More
A0A1B6IDQ1   A0A1B6GQ84   A0A154PCN2   A0A3L8DRI9   A0A026X0P7   A0A151HZ85   A0A158NII8   A0A151K149   A0A2J7QPZ6   A0A2J7QQ10   F4WJI5   A0A2J7QPZ2   A0A2J7QPY7   A0A1B6DSY2   A0A195D1G5   A0A0T6AXJ1   A0A1I8MVD0   E2B3N7   A0A1S3ISE2   A0A1S3KDP9   A0A2A3EEA2   A0A1I8PIQ9   A0A139WMB2   A0A210Q653   A0A151IUN5   A0A1B6ITJ2   A0A067QYV2   J9JTH8   A0A2C9L7T5   A0A310SBL0   A0A336MH89   A0A336M416   W8BRQ2   A0A2J7QPY5   A0A0L7RD77   M7ASF6   E9J3B8   D6WBW5   A0A151XDH2   A0A0L8HXQ6   A0A0K8V476   K7GAX4   A0A088AN11   A0A224XTC2   A0A1B6LVG7   B4H1Y1   V9L223   N6TYJ5   A0A3B3VAG6   B3MA89   A0A2G8KEC4   A0A3M6TA92   H3AQF4   A0A0M8ZYJ4   B4LFW4   A0A3B3WU24   A0A3B3YD78   A0A2S2N7H7   A0A3P9P499   A0A1A9WRA9   Q29EF1   A0A3B3YCE3   A0A087YKV0   A0A3B3TUW5   A0A1W4UKK1   A0A3B0JU15   B4N551   A0A2J7QPZ1   A0A0K8TKP9   A0A1J1J3B1   M4AFR9   A0A3B4WNQ7   A0A3B5RES8   A0A3B5PRK8   A0A1A9W8W1   B3NCG9   A0A2U9C331   H0RN94   A0A0B6ZT31   A0A3B5M078   Q9VSZ4   A0A3Q4BXG8   A0A2T7PSW4   A0A1S3T5L3   B4PEW1   Q8SXJ3   A0A1S3T5L2   A0A1S3T5L5   A0A1B0GCR1   A0A1Q3EXJ8   A0A1A9UL82   A0A1S3T5L1  

Pubmed

26354079    22118469    30249741    24508170    21347285    21719571    + More
25315136    20798317    18362917    19820115    28812685    24845553    15562597    24495485    23624526    21282665    17381049    17994087    24402279    23537049    29023486    30382153    9215903    15632085    26369729    23542700    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304   

EMBL

ODYU01011713    SOQ57623.1    NWSH01001058    PCG72879.1    KQ461175    KPJ07999.1    + More
KQ459472    KPJ00169.1    AGBW02014864    OWR40971.1    GECU01014451    JAS93255.1    GECU01022650    JAS85056.1    GECZ01005256    JAS64513.1    KQ434864    KZC09028.1    QOIP01000005    RLU23030.1    KK107063    EZA60969.1    KQ976704    KYM77082.1    ADTU01016737    KQ981178    KYN45280.1    NEVH01012087    PNF30654.1    PNF30653.1    GL888183    EGI65641.1    PNF30649.1    PNF30648.1    GEDC01008518    JAS28780.1    KQ976973    KYN06755.1    LJIG01022561    KRT79920.1    GL445365    EFN89693.1    KZ288269    PBC30040.1    KQ971315    KYB29016.1    NEDP02004871    OWF44159.1    KQ980946    KYN11233.1    GECU01017474    JAS90232.1    KK852818    KDR15712.1    ABLF02014751    KQ761768    OAD57127.1    UFQT01001176    SSX29330.1    UFQT01000530    SSX25014.1    GAMC01007002    JAB99553.1    PNF30650.1    KQ414613    KOC68922.1    KB586437    EMP25815.1    GL768061    EFZ12690.1    EEZ97859.2    KQ982294    KYQ58407.1    KQ417059    KOF93969.1    GDHF01018615    JAI33699.1    AGCU01174361    GFTR01005217    JAW11209.1    GEBQ01012332    JAT27645.1    CH479203    EDW30333.1    JW872893    AFP05411.1    APGK01046951    APGK01046952    KB741071    ENN74390.1    CH902618    EDV39103.2    MRZV01000652    PIK46319.1    RCHS01004038    RMX38263.1    AFYH01168592    AFYH01168593    AFYH01168594    KQ435824    KOX72223.1    CH940647    EDW69341.1    GGMR01000117    MBY12736.1    CH379070    EAL30110.3    AYCK01007484    OUUW01000002    SPP76846.1    CH964101    EDW79490.1    PNF30651.1    GDAI01002661    JAI14942.1    CVRI01000067    CRL06418.1    CH954178    EDV51199.2    CP026254    AWP11037.1    BT132816    AEU04565.1    HACG01024642    CEK71507.1    AE014296    AAF50264.2    PZQS01000002    PVD36518.1    CM000159    EDW93016.2    AY089605    AAL90343.1    CCAG010002190    GFDL01015008    JAV20037.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000076502    UP000279307    + More
UP000053097    UP000078540    UP000005205    UP000078541    UP000235965    UP000007755    UP000078542    UP000095301    UP000008237    UP000085678    UP000242457    UP000095300    UP000007266    UP000242188    UP000078492    UP000027135    UP000007819    UP000076420    UP000053825    UP000031443    UP000075809    UP000053454    UP000007267    UP000005203    UP000008744    UP000019118    UP000261500    UP000007801    UP000230750    UP000275408    UP000008672    UP000053105    UP000008792    UP000261480    UP000242638    UP000091820    UP000001819    UP000028760    UP000192221    UP000268350    UP000007798    UP000183832    UP000002852    UP000261360    UP000008711    UP000246464    UP000261380    UP000000803    UP000261620    UP000245119    UP000087266    UP000002282    UP000092444    UP000078200   

PRIDE

Q9VSZ4    Q8SXJ3   

Pfam

PF03399   SAC3_GANP        + More
PF00787   PX

Interpro

IPR005062   SAC3/GANP/THP3        + More
IPR036871   PX_dom_sf       
IPR001683   Phox       
IPR036181   MIT_dom_sf       

SUPFAM

SSF116846   SSF116846        + More
SSF64268   SSF64268       

Gene 3D

3.30.1520.10    

ProteinModelPortal

A0A2H1WX30   A0A2A4JM29   A0A194QRP4   A0A194Q495   A0A212EHM4   A0A1B6J253   + More
A0A1B6IDQ1   A0A1B6GQ84   A0A154PCN2   A0A3L8DRI9   A0A026X0P7   A0A151HZ85   A0A158NII8   A0A151K149   A0A2J7QPZ6   A0A2J7QQ10   F4WJI5   A0A2J7QPZ2   A0A2J7QPY7   A0A1B6DSY2   A0A195D1G5   A0A0T6AXJ1   A0A1I8MVD0   E2B3N7   A0A1S3ISE2   A0A1S3KDP9   A0A2A3EEA2   A0A1I8PIQ9   A0A139WMB2   A0A210Q653   A0A151IUN5   A0A1B6ITJ2   A0A067QYV2   J9JTH8   A0A2C9L7T5   A0A310SBL0   A0A336MH89   A0A336M416   W8BRQ2   A0A2J7QPY5   A0A0L7RD77   M7ASF6   E9J3B8   D6WBW5   A0A151XDH2   A0A0L8HXQ6   A0A0K8V476   K7GAX4   A0A088AN11   A0A224XTC2   A0A1B6LVG7   B4H1Y1   V9L223   N6TYJ5   A0A3B3VAG6   B3MA89   A0A2G8KEC4   A0A3M6TA92   H3AQF4   A0A0M8ZYJ4   B4LFW4   A0A3B3WU24   A0A3B3YD78   A0A2S2N7H7   A0A3P9P499   A0A1A9WRA9   Q29EF1   A0A3B3YCE3   A0A087YKV0   A0A3B3TUW5   A0A1W4UKK1   A0A3B0JU15   B4N551   A0A2J7QPZ1   A0A0K8TKP9   A0A1J1J3B1   M4AFR9   A0A3B4WNQ7   A0A3B5RES8   A0A3B5PRK8   A0A1A9W8W1   B3NCG9   A0A2U9C331   H0RN94   A0A0B6ZT31   A0A3B5M078   Q9VSZ4   A0A3Q4BXG8   A0A2T7PSW4   A0A1S3T5L3   B4PEW1   Q8SXJ3   A0A1S3T5L2   A0A1S3T5L5   A0A1B0GCR1   A0A1Q3EXJ8   A0A1A9UL82   A0A1S3T5L1  

PDB

5G5P     E-value=0.00500897,     Score=94

KEGG

101737472    K16734 SAC3 domain-containing protein 1 | (RefSeq) SAC3 domain-containing protein 1

GO

GO:0051298   GO:0051225   GO:0005813   GO:0005819   GO:0005634   GO:0035091   GO:0006886   GO:0005623   GO:0016021  

Length:

370

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1106

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01315

outside

1  -  370

 

 

Pi

27.10073

Theta

22.461125

Tajima's D

0.48654

CLR

0.10198

CSRT

0.520573971301435

Interpretation

Uncertain