Gene

KWMTBOMO05997

Pre Gene Modal

BGIBMGA002819

Annotation

PREDICTED:_WD_repeat-containing_protein_66-like_[Papilio_machaon]

Location

Bomo_Chr10(+):15934528-15944716      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.405 PlasmaMembrane   Reliability : 1.636

CDS

ATGGCGACTATTTTTTCAGGCAACACACCTTGCCCGTGTTGGGAAAAAGTTGTAGCTGAGATCGATTCAAACACAGGATTATTAAAACAGAAGTTGATAAAGAAGAAACTGCCAAGTGACGCTACTGTCAGCGGGAAGACTTTCCTTGTCAGGGATTTTATTGTTTGTACAAACAACCAAGGTGTCGGTTTCGTTGATTTCGCAACTGAGAAGCTTGTCACAGTTTTGAACAGCAAACGGTCGTATGCTTTAGCATTGAGTGTGCATCCAGAGAAGCCATATGTGTGCATCGGATACGACAATGGTATAGTTGAAATGTATAATTTTGTTCAGCACAAGCTGTTCGTTAGACTCGACCTGAGAGATTTGTACAAGATCGTCATCCCTCCAAAAGACGACTCCATAAAATGCAACTACGAAGTAACTGTACCTCCGATTTCTGTGTCGTGTTTGAAATATTCTCATTCAGGAATGCATTTAGCTTGCGGACTGAACACAGGACAGTTGCTGTTCTTACATCCAACGACAATAGACGTTATAACCGAAATTCCATACACGGACACCGGGCACGCCATCAAACAGATTACGTATAGCTGCGATTCACTAACGCTCGCTCTGTTTGATGCTGGTCGAACAGTATGCGTTTACAAATACGACTGCCAGGATTTATCATGGAAATTCATTGGCAAACATCGAGCTCACTACAAAGATATTACATCAATATTATTCCTCTCAGAAAAGAATGCAAACGGAGAATATAAGCTTATATCTTTGGGGATCGATAGAATTATGGTAGAATATGATATCGGAGAGAGTGCCGACGGCTATTTGGAAATACTCAGCTTGGACAGACTGGATCAGACCGCTGTACCATTAGCCGGGATTCAGTGGCCGTCACCTGAAGGCCTGGATCCGGATGTGCACAGATTAGATCTGCCTTTGATTCTGGTTGCTAATGATGAGTTCAAATACAAAATAGTGAACTACGCAACTACGATGACTTTATCGACAATATTGGGCCCTCGATATGAGCATCCAGTACGCAGAATGTTATTGACTGCAAGAGAGGAAGATAACGGAAAGCAACAATACTTGATATTTGCCACCAAGAACGTTGTGGGGATACAGAAGATGCCCATAGATGGTAATCCTTGGAAGCACGCGGGCTTGCTTGGACATCCATTGGAGGTAACAGAGATGTGTTTCAGGGAAGACTGTGGCATACTGTTTACGATTGGAGACAAAGATGGATGCATGAGTCAATGGGCTATTAATTACAGATCTGTAGACACCACGACGAAACAAGGGGGCGGGGACTTAGATCCGTATTACTGTCTGATCGAGAACGGGCGTCCGGGCTGGCTCTTCCAAGAAATTCGTGATTTATTCTACTACATACAGATATTGTGTCAGGGCACGTTCTCGCCCGCAATGAGGAGAGTCAAAGATTTTATACCCATTGATTCGCTACCGGATCTAATGAGAGCGCTGGGATTTTTCTTATCTGAATATGAGACAGAAAATTTAATTGCAGAAGCGAAATACAAGGTGTATCAAATTAATCCATCGACCGAAATAGACTTTGAGGAGTTTGTGAAGCTGTACATCAATCATCGGCCTGCATTCGGGTACAGATACAAGAAAATACGTGACGCTTTTGCACACTTCGCGTATTTGGATAATGAACAGTTGGCCATAAACAGGAACGGGTTGATTGAGCTGCTTGCGGATTATGGTGAACGTTTCCCTCGGGAATTGACTTGGTATTTAATATCAATATTGTGTGGGGAGAGCTTCGAAGACAGAGCGAAGATGGCTGAAAACGATTTTTCGTTTATGCCAGAGGAGCTGACTCTTGACTATTTAGCCACCTACGTCATAGGTGTCGATGACTTGGAAAACATTCCCGAGGGATCTTCAGGGTTGGGGTCGTTCGACACACAATCGGCACAGACGAGTACTACGGGAGACTGA

Protein

MATIFSGNTPCPCWEKVVAEIDSNTGLLKQKLIKKKLPSDATVSGKTFLVRDFIVCTNNQGVGFVDFATEKLVTVLNSKRSYALALSVHPEKPYVCIGYDNGIVEMYNFVQHKLFVRLDLRDLYKIVIPPKDDSIKCNYEVTVPPISVSCLKYSHSGMHLACGLNTGQLLFLHPTTIDVITEIPYTDTGHAIKQITYSCDSLTLALFDAGRTVCVYKYDCQDLSWKFIGKHRAHYKDITSILFLSEKNANGEYKLISLGIDRIMVEYDIGESADGYLEILSLDRLDQTAVPLAGIQWPSPEGLDPDVHRLDLPLILVANDEFKYKIVNYATTMTLSTILGPRYEHPVRRMLLTAREEDNGKQQYLIFATKNVVGIQKMPIDGNPWKHAGLLGHPLEVTEMCFREDCGILFTIGDKDGCMSQWAINYRSVDTTTKQGGGDLDPYYCLIENGRPGWLFQEIRDLFYYIQILCQGTFSPAMRRVKDFIPIDSLPDLMRALGFFLSEYETENLIAEAKYKVYQINPSTEIDFEEFVKLYINHRPAFGYRYKKIRDAFAHFAYLDNEQLAINRNGLIELLADYGERFPRELTWYLISILCGESFEDRAKMAENDFSFMPEELTLDYLATYVIGVDDLENIPEGSSGLGSFDTQSAQTSTTGD

Uniprot

A0A194QR62   A0A212EHL8   A0A3S2TTN8   A0A194Q9S4   A0A2H1VV69   A0A2A4JN92   + More
A0A139WCL9   K7IXD4   A0A154P067   A0A151XI81   A0A310SPW8   A0A232EV42   W5MD80   H2YNA2   A0A026WAQ2   A0A2A3EHE8   A0A1L8I155   A0A195EQ42   A0A087ZPP4   F7ABS5   A0A3Q1IBX8   A0A3Q0K5M8   V4BRV3   A0A151I7P7   A0A210QD55   F7EE82   A0A3P8W6T1   K1Q7E1   A0A1I8HI71   W5MDA3   A0A267GMP3   R7UDH9   A0A1I8JEL0   A0A060XJ43   A0A267GPP3   B3RYZ2   F1Q8Y1   A0A267DJZ0   A0A2R8RY46   A0A369S1V2   G3VUV1   A0A3B4CV03   A0A3B4ZRR4   C3XUL0   A0A3Q1C600   K7G9M2   A3QK38   A0A151NSZ7   K7G9P0   A0A091NQT4   A0A1U7RLX3   A0A3Q1F350   A0A3B4VE41   F7FU35   A0A3B4Y5N2   A0A093ISJ5   A0A087VDC4   A0A1S3K2G4   A0A2D0PRQ2   A0A1S3K1S6   A0A1I8GK17   A0A3P8UDA3   A0A1W4ZXE4   A0A1X7VIL7   A0A091U632   A0A094KT60   A0A091PNI1   A0A091KE96   M4ASZ2   A0A3Q3BAU9   A0A091SNI9   A0A091HKZ6   F6VXV4   A0A2I0M896   H0Z6W3   A0A3Q3XA48   A0A093Q8R4   A0A0A0A5U5   A0A099ZT44   A0A3S2P745   A0A3L8SD17   A0A1V4JS62   A0A146Y6I4   A0A3Q2NQ52   A0A087RB13   A0A2I4BYH7   A0A147AS80   A0A3P8YJC0   A0A3M0K3H5   A0A093HE96   A0A218V5J8   A0A1A8B005   A0A3Q2Z6U6   A0A091JLX1   H3BG34   A0A1V4JS94   A0A091GXZ8   A0A093NM27   A0A091WM90  

Pubmed

26354079    22118469    18362917    19820115    20075255    28648823    + More
24508170    27762356    12481130    15114417    23254933    28812685    20431018    24487278    22992520    26392545    24755649    18719581    23594743    30042472    21709235    18563158    17381049    22293439    17495919    23542700    18464734    23371554    20360741    30282656    25069045    9215903   

EMBL

KQ461175    KPJ07993.1    AGBW02014864    OWR40975.1    RSAL01000002    RVE54958.1    + More
KQ459472    KPJ00166.1    ODYU01004342    SOQ44114.1    NWSH01001058    PCG72882.1    KQ971365    KYB25656.1    AAZX01006967    KQ434782    KZC04530.1    KQ982082    KYQ60114.1    KQ761824    OAD56770.1    NNAY01002061    OXU22203.1    AHAT01005122    KK107293    EZA53167.1    KZ288254    PBC30712.1    CM004466    OCU02055.1    KQ982021    KYN30405.1    KB202237    ESO91649.1    KQ978397    KYM94219.1    NEDP02004104    OWF46674.1    AAMC01072987    AAMC01072988    AAMC01072989    JH816920    EKC24770.1    NIVC01000238    PAA87286.1    AMQN01001471    AMQN01001472    KB302615    ELU04166.1    FR905184    CDQ76910.1    NIVC01000208    PAA87973.1    DS985246    EDV24111.1    CR931763    NIVC01004035    PAA48859.1    CR848794    NOWV01000093    RDD40709.1    AEFK01071537    AEFK01071538    AEFK01071539    AEFK01071540    AEFK01071541    GG666465    EEN68292.1    AGCU01088573    AGCU01088574    AGCU01088575    AGCU01088576    AGCU01088577    AKHW03002185    KYO39729.1    KL391157    KFP91671.1    KK600277    KFW05695.1    KL489047    KFO10616.1    KK419334    KFQ86164.1    KL356336    KFZ62428.1    KK663160    KFQ09467.1    KK741510    KFP38904.1    KK478981    KFQ59903.1    KL217497    KFO95787.1    AKCR02000030    PKK25901.1    ABQF01047133    KL415735    KFW80562.1    KL870823    KGL89416.1    KL897916    KGL84942.1    CM012445    RVE68237.1    QUSF01000030    RLV99937.1    LSYS01006629    OPJ75032.1    GCES01036707    JAR49616.1    KL226265    KFM10667.1    GCES01004890    JAR81433.1    QRBI01000121    RMC05774.1    KL217402    KFV77307.1    MUZQ01000045    OWK61246.1    HADY01022287    SBP60772.1    KK501101    KFP12701.1    AFYH01016466    AFYH01016467    AFYH01016468    AFYH01016469    AFYH01016470    OPJ75031.1    KL513722    KFO87310.1    KL224874    KFW65156.1    KK735845    KFR16235.1   

Proteomes

UP000053240    UP000007151    UP000283053    UP000053268    UP000218220    UP000007266    + More
UP000002358    UP000076502    UP000075809    UP000215335    UP000018468    UP000007875    UP000053097    UP000242457    UP000186698    UP000078541    UP000005203    UP000008144    UP000265040    UP000030746    UP000078542    UP000242188    UP000008143    UP000265120    UP000005408    UP000095280    UP000215902    UP000014760    UP000193380    UP000009022    UP000000437    UP000253843    UP000007648    UP000261440    UP000261400    UP000001554    UP000257160    UP000007267    UP000050525    UP000189705    UP000257200    UP000261420    UP000002280    UP000261360    UP000085678    UP000221080    UP000265080    UP000192224    UP000007879    UP000002852    UP000264800    UP000054308    UP000002279    UP000053872    UP000007754    UP000261620    UP000053858    UP000053641    UP000276834    UP000190648    UP000265000    UP000053286    UP000192220    UP000265140    UP000269221    UP000053875    UP000197619    UP000264820    UP000053119    UP000008672    UP000054081    UP000053605   

Pfam

PF00400   WD40        + More
PF12894   ANAPC4_WD40
PF18265   Nas2_N
PF00595   PDZ

Interpro

IPR011992   EF-hand-dom_pair        + More
IPR036322   WD40_repeat_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR019775   WD40_repeat_CS       
IPR024977   Apc4_WD40_dom       
IPR011044   Quino_amine_DH_bsu       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR040815   Nas2_N       

SUPFAM

SSF50978   SSF50978        + More
SSF47473   SSF47473       
SSF50998   SSF50998       
SSF50969   SSF50969       
SSF50156   SSF50156       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A194QR62   A0A212EHL8   A0A3S2TTN8   A0A194Q9S4   A0A2H1VV69   A0A2A4JN92   + More
A0A139WCL9   K7IXD4   A0A154P067   A0A151XI81   A0A310SPW8   A0A232EV42   W5MD80   H2YNA2   A0A026WAQ2   A0A2A3EHE8   A0A1L8I155   A0A195EQ42   A0A087ZPP4   F7ABS5   A0A3Q1IBX8   A0A3Q0K5M8   V4BRV3   A0A151I7P7   A0A210QD55   F7EE82   A0A3P8W6T1   K1Q7E1   A0A1I8HI71   W5MDA3   A0A267GMP3   R7UDH9   A0A1I8JEL0   A0A060XJ43   A0A267GPP3   B3RYZ2   F1Q8Y1   A0A267DJZ0   A0A2R8RY46   A0A369S1V2   G3VUV1   A0A3B4CV03   A0A3B4ZRR4   C3XUL0   A0A3Q1C600   K7G9M2   A3QK38   A0A151NSZ7   K7G9P0   A0A091NQT4   A0A1U7RLX3   A0A3Q1F350   A0A3B4VE41   F7FU35   A0A3B4Y5N2   A0A093ISJ5   A0A087VDC4   A0A1S3K2G4   A0A2D0PRQ2   A0A1S3K1S6   A0A1I8GK17   A0A3P8UDA3   A0A1W4ZXE4   A0A1X7VIL7   A0A091U632   A0A094KT60   A0A091PNI1   A0A091KE96   M4ASZ2   A0A3Q3BAU9   A0A091SNI9   A0A091HKZ6   F6VXV4   A0A2I0M896   H0Z6W3   A0A3Q3XA48   A0A093Q8R4   A0A0A0A5U5   A0A099ZT44   A0A3S2P745   A0A3L8SD17   A0A1V4JS62   A0A146Y6I4   A0A3Q2NQ52   A0A087RB13   A0A2I4BYH7   A0A147AS80   A0A3P8YJC0   A0A3M0K3H5   A0A093HE96   A0A218V5J8   A0A1A8B005   A0A3Q2Z6U6   A0A091JLX1   H3BG34   A0A1V4JS94   A0A091GXZ8   A0A093NM27   A0A091WM90  

KEGG

101737977    no KO assigned | (RefSeq) WD repeat-containing protein 66-like

GO

GO:0003341   GO:0031514   GO:0036126   GO:0030223   GO:0002574   GO:0030317   GO:0005515   GO:0006508   GO:0008270   GO:0031012   GO:0008237   GO:0005509   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

Length:

657

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00399

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.00032

outside

1  -  657

 

 

Pi

22.406115

Theta

24.655891

Tajima's D

-0.647329

CLR

2.42307

CSRT

0.210839458027099

Interpretation

Uncertain