Gene

KWMTBOMO05995

Pre Gene Modal

BGIBMGA002819

Annotation

putative_WD_repeat_domain_66_[Operophtera_brumata]

Location

Bomo_Chr10(+):15929298-15929607      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.353

CDS

ATGATCAGCTGCATATCATCAGATCGACAAGGCAAATGGCTGGTGACCGCCGATTCTGGTCCAGAGAACGTCATAATAATCTGGGACAGCGTTGATTACTTCCCTCAAAGGACAATATTTTCGCCGCACGGAAAGACCAAAATATCGAAAGTTGTCATGAGTGCAGATGCGAAATATCTCCTGTCACTGGGTTACTCCGAGAAGACTACTTTGAATTGGTGGGATTGGTCTTCTGGACTCGATGACCCTGATGGTTAA

Protein

MISCISSDRQGKWLVTADSGPENVIIIWDSVDYFPQRTIFSPHGKTKISKVVMSADAKYLLSLGYSEKTTLNWWDWSSGLDDPDG

Uniprot

H9IZY4   A0A0L7KRM7   A0A194Q584   A0A212EHL8   A0A194QR62   A0A3S2TTN8   + More
A0A2A4JN92   A0A2H1VV69   A0A3B3QQJ9   A0A1S3K2G4   A0A1S3K1S6   A0A2G8JQY4   A0A2D0PRQ2   A0A091MQA3   W4XUN5   A0A091QG18   A0A3P8YJC0   A0A2G8JY95   A0A060XJ43   M7BYE5   K7G9M2   A0A195DML8   A0A3B4CV03   W5MD80   W5MDA3   Q4RT44   A0A151XI81   A0A2U9BTC1   A0A3Q0K5M8   A0A2A3EHE8   A0A091NQT4   A0A091WM90   A0A093HE96   H3DEG1   A0A151I7P7   U3IFB7   A0A315UZ01   A0A183AEI8   A0A195AWH1   A0A154P067   G3NZG4   A0A0L8HB67   R0KPR8   W5L2B2   A0A1U7RLX3   A0A3Q2DMI2   C3XUL0   A0A093Q8R4   A0A3P9Q9T5   A0A3P9QAN8   A0A0Q3Q649   A0A091LCM7   A0A0P7VDJ8   A0A091HKZ6   A0A093NM27   A0A1W4ZXE4   A0A151NSZ7   A0A3B5KTY6   A0A094KT60   M4ASZ2   A0A146Y639   A0A3Q0QU57   A0A091ULM6   A0A146Y7Q2   A0A0L0T750   A0A3Q2NQ52   A0A3Q3XA48   A0A146Y847   A0A087ZPP4   A0A147AS80   S4RZB0   A0A232EV42   A0A091PNI1   A0A091KE96   A0A026WAQ2   F7ABS5   A0A091JLX1   A0A3M0K3H5   A0A3Q2V788   A0A093HGD3   A0A087VDC4   A0A093ISJ5   A0A3M6UDP1   E0VWU2   A0A0L0T156   A0A310SPW8   A0A091SNI9   A0A0N0BGX1   A0A091U632   F6VXV4   H9GHL7   A0A087RB13   A0A2R8RY46   A0A195EQ42   F7EE82   A0A3B4VE41   A0A3Q4MJ08   A0A2H1CZ45   H2YNA3   A0A158P2J9  

Pubmed

19121390    26227816    26354079    22118469    29240929    29023486    + More
25069045    24755649    23624526    17381049    15496914    23749191    29703783    25329095    18563158    22293439    23542700    28648823    24508170    12481130    15114417    30382153    20566863    18464734    21881562    23594743    20431018    25186727    21347285   

EMBL

BABH01018950    JTDY01006783    KOB65696.1    KQ459472    KPJ00165.1    AGBW02014864    + More
OWR40975.1    KQ461175    KPJ07993.1    RSAL01000002    RVE54958.1    NWSH01001058    PCG72882.1    ODYU01004342    SOQ44114.1    MRZV01001392    PIK38182.1    KK512803    KFP63730.1    AAGJ04024323    AAGJ04024324    AAGJ04024325    AAGJ04024326    KK698782    KFQ26000.1    MRZV01001090    PIK40727.1    FR905184    CDQ76910.1    KB523138    EMP37108.1    AGCU01088573    AGCU01088574    AGCU01088575    AGCU01088576    AGCU01088577    KQ980724    KYN14140.1    AHAT01005122    CAAE01014999    CAG08438.1    KQ982082    KYQ60114.1    CP026251    AWP07173.1    KZ288254    PBC30712.1    KL391157    KFP91671.1    KK735845    KFR16235.1    KL217402    KFV77307.1    KQ978397    KYM94219.1    ADON01128115    ADON01128116    ADON01128117    NHOQ01002573    PWA15941.1    UZAN01042226    VDP75350.1    KQ976731    KYM76314.1    KQ434782    KZC04530.1    KQ418610    KOF86558.1    KB744353    EOA95223.1    GG666465    EEN68292.1    KL415735    KFW80562.1    LMAW01001359    KQK83692.1    KL310106    KFP52910.1    JARO02002165    KPP73376.1    KL217497    KFO95787.1    KL224874    KFW65156.1    AKHW03002185    KYO39729.1    KL356336    KFZ62428.1    GCES01036705    JAR49618.1    KL409758    KFQ91809.1    GCES01036708    JAR49615.1    GG745366    KNE70555.1    GCES01036706    JAR49617.1    GCES01004890    JAR81433.1    NNAY01002061    OXU22203.1    KK663160    KFQ09467.1    KK741510    KFP38904.1    KK107293    EZA53167.1    KK501101    KFP12701.1    QRBI01000121    RMC05774.1    KK626808    KFV53668.1    KL489047    KFO10616.1    KK600277    KFW05695.1    RCHS01001724    RMX51689.1    DS235824    EEB17847.1    GG745357    KNE68543.1    KQ761824    OAD56770.1    KK478981    KFQ59903.1    KQ435763    KOX75404.1    KK419334    KFQ86164.1    AAWZ02030094    AAWZ02030095    AAWZ02030096    KL226265    KFM10667.1    CR848794    KQ982021    KYN30405.1    AAMC01072987    AAMC01072988    AAMC01072989    KZ428272    PIS92012.1    ADTU01006906   

Proteomes

UP000005204    UP000037510    UP000053268    UP000007151    UP000053240    UP000283053    + More
UP000218220    UP000261540    UP000085678    UP000230750    UP000221080    UP000007110    UP000265140    UP000193380    UP000031443    UP000007267    UP000078492    UP000261440    UP000018468    UP000075809    UP000246464    UP000242457    UP000053605    UP000053875    UP000007303    UP000078542    UP000016666    UP000050740    UP000078540    UP000076502    UP000007635    UP000053454    UP000018467    UP000189705    UP000265020    UP000001554    UP000242638    UP000051836    UP000034805    UP000054308    UP000054081    UP000192224    UP000050525    UP000261380    UP000002852    UP000261340    UP000053283    UP000054350    UP000265000    UP000261620    UP000005203    UP000245300    UP000215335    UP000053097    UP000008144    UP000053119    UP000269221    UP000264840    UP000275408    UP000009046    UP000053105    UP000002279    UP000001646    UP000053286    UP000000437    UP000078541    UP000008143    UP000261420    UP000261580    UP000007875    UP000005205   

PRIDE

H9IZY4   

Pfam

PF00400   WD40        + More
PF12894   ANAPC4_WD40
PF00010   HLH
PF18265   Nas2_N
PF00595   PDZ

Interpro

IPR011992   EF-hand-dom_pair        + More
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       
IPR036638   HLH_DNA-bd_sf       
IPR032648   MLXIP       
IPR011598   bHLH_dom       
IPR011044   Quino_amine_DH_bsu       
IPR007110   Ig-like_dom       
IPR019775   WD40_repeat_CS       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR040815   Nas2_N       

SUPFAM

SSF47473   SSF47473        + More
SSF50978   SSF50978       
SSF50998   SSF50998       
SSF47459   SSF47459       
SSF50969   SSF50969       
SSF50156   SSF50156       

Gene 3D

2.130.10.10     4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

H9IZY4   A0A0L7KRM7   A0A194Q584   A0A212EHL8   A0A194QR62   A0A3S2TTN8   + More
A0A2A4JN92   A0A2H1VV69   A0A3B3QQJ9   A0A1S3K2G4   A0A1S3K1S6   A0A2G8JQY4   A0A2D0PRQ2   A0A091MQA3   W4XUN5   A0A091QG18   A0A3P8YJC0   A0A2G8JY95   A0A060XJ43   M7BYE5   K7G9M2   A0A195DML8   A0A3B4CV03   W5MD80   W5MDA3   Q4RT44   A0A151XI81   A0A2U9BTC1   A0A3Q0K5M8   A0A2A3EHE8   A0A091NQT4   A0A091WM90   A0A093HE96   H3DEG1   A0A151I7P7   U3IFB7   A0A315UZ01   A0A183AEI8   A0A195AWH1   A0A154P067   G3NZG4   A0A0L8HB67   R0KPR8   W5L2B2   A0A1U7RLX3   A0A3Q2DMI2   C3XUL0   A0A093Q8R4   A0A3P9Q9T5   A0A3P9QAN8   A0A0Q3Q649   A0A091LCM7   A0A0P7VDJ8   A0A091HKZ6   A0A093NM27   A0A1W4ZXE4   A0A151NSZ7   A0A3B5KTY6   A0A094KT60   M4ASZ2   A0A146Y639   A0A3Q0QU57   A0A091ULM6   A0A146Y7Q2   A0A0L0T750   A0A3Q2NQ52   A0A3Q3XA48   A0A146Y847   A0A087ZPP4   A0A147AS80   S4RZB0   A0A232EV42   A0A091PNI1   A0A091KE96   A0A026WAQ2   F7ABS5   A0A091JLX1   A0A3M0K3H5   A0A3Q2V788   A0A093HGD3   A0A087VDC4   A0A093ISJ5   A0A3M6UDP1   E0VWU2   A0A0L0T156   A0A310SPW8   A0A091SNI9   A0A0N0BGX1   A0A091U632   F6VXV4   H9GHL7   A0A087RB13   A0A2R8RY46   A0A195EQ42   F7EE82   A0A3B4VE41   A0A3Q4MJ08   A0A2H1CZ45   H2YNA3   A0A158P2J9  

KEGG

101737977    no KO assigned | (RefSeq) WD repeat-containing protein 66-like

GO

GO:0030223   GO:0002574   GO:0031514   GO:0003341   GO:0030317   GO:0036126   GO:0046983   GO:1900402   GO:0000981   GO:0005515   GO:0006508   GO:0008270   GO:0031012   GO:0008237   GO:0005509   GO:0005622   GO:0007264   GO:0008026   GO:0016597  

PANTHER

PTHR15741:SF23  

Length:

85

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00964

Exp number, first 60 AAs:

0.00655

Total prob of N-in:

0.43107

outside

1  -  85

 

 

Pi

3.487503

Theta

5.701483

Tajima's D

-0.884975

CLR

0

CSRT

0.155042247887606

Interpretation

Uncertain