SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05988
Pre Gene Modal
BGIBMGA002815
Annotation
PREDICTED:_leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.419
 

Sequence

CDS
ATGGGACGCCGATCTGAGATGGCCACCCCCGATAACAGCGACGAAGAAAGCGGAGACGCTTTCACCGACGGGGACTTCGAGGACTCCGGCGACGAAACCGTTGTCGAAAATAACAAATCTCATATACCTGTTAATGACACTATCAATGAAGAAGTCAAGAATGGTCAATATGTAGAAGAGAATACTCCAAAAGTTAACGGCCACAATAGTCAGATGACGCCCTTAGAAGGTCCAGTCTTAACAGATGTGCGCCGAGATTCCTACGCTGAACAAACACCTTCGATTGTTGGCATCCTAGGAGATCAACATAATCATGTACGTATTTAA
Protein
MGRRSEMATPDNSDEESGDAFTDGDFEDSGDETVVENNKSHIPVNDTINEEVKNGQYVEENTPKVNGHNSQMTPLEGPVLTDVRRDSYAEQTPSIVGILGDQHNHVRI

Summary

Pfam
PF09738   LRRFIP
Interpro
IPR019139   LRRFIP1/2       

Ontologies

Topology

Length:
108
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.34821
outside
1  -  108
 
 

Population Genetic Test Statistics

Pi
12.461297
Theta
18.328489
Tajima's D
-0.970451
CLR
0
CSRT
0.137593120343983
Interpretation
Uncertain
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