Gene

KWMTBOMO05986  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002888

Annotation

PREDICTED:_ARF_GTPase-activating_protein_GIT2_[Bombyx_mori]

Location

Bomo_Chr10(-):15789226-15798567      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.221

CDS

ATGATAATATCACGGTCTAAACTTCGCTCTACAGCGGAAGTTTGCGCTGATTGTGGGGCATCAGATCCTTCGTGGGCGTCGATCAACCGTGGGCTGCTGCTTTGTGCGGAGTGCTGTAGCGTTCACCGGAGTATGGGGCGTCATATTTCTCACGTTAAGTCTCTGAGGCAGGGCTCCTGGCCGCCTTCGCTGCTTAATATGGTCCAATCGCTGACAGCTCAGAATGTAAACAGCATTTGGGAACATTCTTTACTTGACACTTCAGCCCCTAAGCATTTACGGAAGAAACCGCAACCCAAAGATCCCTTACATCCAGTTAAATCTGAGTTCATCCTGGCCAAGCATCTGCGGCTCGCGTATGTACTGCGTGCGCGGCGTGACGAGCCCCCCAGCGAGCTAGGAAGGCAACTCCACTCTGCTGTGCGGAGTTCTTCATTAGACACTGCAATGCGACTGCTCGCTCAGGGTGCAGATCCTAATTATTACAATCAGGAAAAAGGGAGCTCGTGCTTACACGTGGCCTGCCGCGCTGGCCAACCATCGCAGGCCGAGCTGCTGGTGGCCTGGGGCGCGGACCCCACCACTAAAGATCAGTCCGGAAGTACACCTTCAGATTGTGCTAGGCAGGGGGGGCATGCGGAGTTGGCGGAGCGCATGACGGAGCTGGTGTACGAGGCCACGGACCGCATGATCCACTTCCTGACCGGCGAGAAGCCCGACCACGCGGCCGGCAGACACTACATCGTGCCGCGAGCCCACGACACGCACGAGATGACCGACGTCGCCAAAGCCGCCAGAGGGAAACTGCAATTGCTGCCGAACCATCTGTTCGAAGAGCTGGTGATGGACATATACGACGAGATCGATCGAAGGGAAACCGAGGCCATCTGGCAGACGAGCGCGTCGGGGCTGGAGCGCAGCGGCGCCGCGTTCCTGCCGGTGAACCCCGCGCTGTCGGCGCCGCGCAACCAGGGCCGCCAGAAGCTGGCCCGCCTGTCGCCGCGCGAGCTCGCCGCCCTGCTGCGCGACGTGCTGCTCGACGCCACGCGACGACAGCGCATGGCCGCGCTGCAGCCCGCAGCGATGTCGGGTCCCCTGAATCCGCTGCTGTCCGCGAGCCACTTGCGGCACGTGTCGCAGATGTCGGACGACGAGCCGCTCTACGACTCGGTCGCTTCGGACGAGGACTACGCGGCCCTGGCGCCCATCGAACTCGACCTATCGACAGTGACCCCGCGGCGAGGGGACGCCGTGTCGGCGACGTACAGCCCGGGCTTGCCCACTGAACAGTCACCCATCGCCGACCCGCGCCGCACCCAGTCGCCCAGCTGTCCGGCTCAGGCCACGCCGGAACGAGACGACCAGATACAGCATTTAAAAAAAGAACTGCACGACAAAGACTCGACCATAGACGAGCTAAAAACTCAGTTGAGGAATCTACAAACCATAGTCGAGAGATTGACTAAAGAGAACAGCGTTTTGAAGACGAGCAGCATCGATGACGACAGTGTGACGTCACTGACCGGGGAGAGCTGTAGTGGTCTCGATGGCTTCGCGGCGCAGGAGCGCGGCAAGAGTCTCGAGTCCGAGCTGGGCCGCGAGGTCGACGTGAGGCCGGCCAAGGGCTCGCAGCGACCGGTCAGTATGTATGAGACTAGGGAAGGCCCAAAGAATAACTGGCAGGTTACTAAACACCAGCTGACAACCCTGTCGAGTTTCGATCGTTCGTTGACCCAGAGCGTTTTGGAGGGTGCCAGCCCGGAAGACATAATTCCGAGCGCCGATCTGGTGCACAAGCGCGCCGAGAGCGTCACGCGCGGCATCCAGCAGCTGTGGGCGGCGGCGCGGCGCCACCAGTCCGGCGCGCTGTCTGGCGCACAGTCCGGCGTGCAGCAGCGGGCCCGCGACACGCGCCGGGCCGTGGGCGCGCTGCTGGCGCTGTTCCCGCAGGACTGTGTAGGCGGCGAGCTGGGCGCGGTGCTGGCGGGGCTGCGCGCGGCGAGCGAGGGCGTGTCGGCGGCGTGCGACTCGGCGGCGCCGCTGCCGGAGCTGCGGGCGGCGGCCTACGAGCTGGCCAAGGCCACCAAGCTCCTGCTCACCCACTTCCCCCCCGCCCCCTCCTCCTAG

Protein

MIISRSKLRSTAEVCADCGASDPSWASINRGLLLCAECCSVHRSMGRHISHVKSLRQGSWPPSLLNMVQSLTAQNVNSIWEHSLLDTSAPKHLRKKPQPKDPLHPVKSEFILAKHLRLAYVLRARRDEPPSELGRQLHSAVRSSSLDTAMRLLAQGADPNYYNQEKGSSCLHVACRAGQPSQAELLVAWGADPTTKDQSGSTPSDCARQGGHAELAERMTELVYEATDRMIHFLTGEKPDHAAGRHYIVPRAHDTHEMTDVAKAARGKLQLLPNHLFEELVMDIYDEIDRRETEAIWQTSASGLERSGAAFLPVNPALSAPRNQGRQKLARLSPRELAALLRDVLLDATRRQRMAALQPAAMSGPLNPLLSASHLRHVSQMSDDEPLYDSVASDEDYAALAPIELDLSTVTPRRGDAVSATYSPGLPTEQSPIADPRRTQSPSCPAQATPERDDQIQHLKKELHDKDSTIDELKTQLRNLQTIVERLTKENSVLKTSSIDDDSVTSLTGESCSGLDGFAAQERGKSLESELGREVDVRPAKGSQRPVSMYETREGPKNNWQVTKHQLTTLSSFDRSLTQSVLEGASPEDIIPSADLVHKRAESVTRGIQQLWAAARRHQSGALSGAQSGVQQRARDTRRAVGALLALFPQDCVGGELGAVLAGLRAASEGVSAACDSAAPLPELRAAAYELAKATKLLLTHFPPAPSS

Uniprot

H9J053   A0A2H1WWU6   A0A194Q9R7   A0A212FCF8   A0A3S2MA72   A0A194QR48   + More
A0A151WXQ6   A0A195CAT5   A0A232EUV4   A0A195EXK2   E2AI12   A0A158NSN3   A0A026WS75   A0A0M8ZTS4   A0A182PIP2   A0A182RJF3   A0A154P3F7   A0A182WBD1   A0A0L7R740   Q7QII5   A0A2A3E4H6   A0A310SL03   A0A2J7PJW5   A0A182WWC8   A0A182VDN2   A0A182I6K7   A0A182QWG5   A0A1Q3G3B6   A0A1Q3G3E8   A0A182N9G0   Q16UB2   A0A182Y828   A0A182U691   A0A1Q3G3E6   A0A0C9R497   A0A336LJS8   A0A182JS68   A0A067R4N6   A0A182JM45   A0A088A058   A0A1B0CB88   A0A1L8DMG8   A0A182LXY4   A0A2M4BFC6   A0A2M4CTA9   A0A084W684   A0A2M4CS14   A0A2M4AKZ6   A0A182FGR7   A0A2M3ZHS3   A0A1B6D9N2   W8BA04   W5J511   A0A1W4X0D2   A0A0K8UBF3   A0A034VR95   A0A1W4VR65   B4KN17   B4LKN1   B4QAL6   B4P852   A0A0K8UWI6   Q28XI9   B4J7S4   A0A0M4ETN0   Q95RG8   A0A0J9R9X7   B4HMS7   B3MIJ1   B4GG79   B3NN67   A0A2M4AM27   A0A0L0BPH7   A0A3B0J0H5   T1PHX1   A0A1I8N1N3   A0A210R2V6   A0A0A9YWP0   A0A1A9X3Q2   A0A1B0C0P3   A0A0J7KJ44   A0A1I8Q748   A0A0P6EZA7   V5GWK4   B4MIR6   A0A0P5PSR0   A0A0P5I9M5   A0A0N8E6G4   A0A0P5MVR6   A0A0N8E5J6  

Pubmed

19121390    26354079    22118469    28648823    20798317    21347285    + More
24508170    30249741    12364791    14747013    17210077    17510324    25244985    24845553    24438588    24495485    20920257    23761445    25348373    17994087    17550304    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    18057021    26108605    25315136    28812685    25401762    26823975   

EMBL

BABH01018966    ODYU01011649    SOQ57531.1    KQ459472    KPJ00156.1    AGBW02009199    + More
OWR51397.1    RSAL01000002    RVE54966.1    KQ461175    KPJ07983.1    KQ982667    KYQ52557.1    KQ978023    KYM97979.1    NNAY01002087    OXU22117.1    KQ981948    KYN32609.1    GL439621    EFN66920.1    ADTU01025072    ADTU01025073    KK107111    QOIP01000011    EZA58900.1    RLU16971.1    KQ435848    KOX70990.1    KQ434809    KZC06363.1    KQ414643    KOC66663.1    AAAB01008807    EAA03954.4    KZ288379    PBC26600.1    KQ764717    OAD54417.1    NEVH01024944    PNF16632.1    APCN01003655    AXCN02000560    GFDL01000745    JAV34300.1    GFDL01000749    JAV34296.1    CH477627    EAT38104.1    GFDL01000756    JAV34289.1    GBYB01011124    JAG80891.1    UFQT01000031    SSX18262.1    KK852704    KDR18062.1    AJWK01004894    GFDF01006428    JAV07656.1    AXCM01002306    AXCM01002307    GGFJ01002615    MBW51756.1    GGFL01003890    MBW68068.1    ATLV01020759    ATLV01020760    KE525307    KFB45728.1    GGFL01003891    MBW68069.1    GGFK01008138    MBW41459.1    GGFM01007308    MBW28059.1    GEDC01014993    JAS22305.1    GAMC01011062    GAMC01011060    GAMC01011058    GAMC01011049    JAB95497.1    ADMH02002185    ETN57930.1    GDHF01028312    JAI24002.1    GAKP01014326    GAKP01014325    JAC44627.1    CH933808    EDW08844.2    CH940648    EDW61754.2    CM000362    EDX06521.1    CM000158    EDW90099.2    KRJ98912.1    GDHF01021277    GDHF01009189    JAI31037.1    JAI43125.1    CM000071    EAL26327.2    CH916367    EDW01130.1    CP012524    ALC40620.1    AE013599    AY061380    AAF58766.2    AAL28928.1    CM002911    KMY92837.1    CH480816    EDW47289.1    CH902619    EDV38067.2    CH479183    EDW35499.1    CH954179    EDV56587.1    KQS62910.1    GGFK01008471    MBW41792.1    JRES01001567    KNC21995.1    OUUW01000001    SPP74137.1    KA648289    AFP62918.1    NEDP02000704    OWF55282.1    GBHO01009619    GBRD01006757    GDHC01000200    JAG33985.1    JAG59064.1    JAQ18429.1    JXJN01023717    LBMM01006629    KMQ90448.1    GDIQ01057157    JAN37580.1    GALX01003838    JAB64628.1    CH963719    EDW72005.2    GDIQ01208346    GDIQ01124079    GDIQ01082190    GDIQ01029923    LRGB01001036    JAL27647.1    KZS13738.1    GDIQ01215644    JAK36081.1    GDIQ01057156    JAN37581.1    GDIQ01154766    JAK96959.1    GDIQ01059700    JAN35037.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000283053    UP000053240    UP000075809    + More
UP000078542    UP000215335    UP000078541    UP000000311    UP000005205    UP000053097    UP000279307    UP000053105    UP000075885    UP000075900    UP000076502    UP000075920    UP000053825    UP000007062    UP000242457    UP000235965    UP000076407    UP000075903    UP000075840    UP000075886    UP000075884    UP000008820    UP000076408    UP000075902    UP000075881    UP000027135    UP000075880    UP000005203    UP000092461    UP000075883    UP000030765    UP000069272    UP000000673    UP000192223    UP000192221    UP000009192    UP000008792    UP000000304    UP000002282    UP000001819    UP000001070    UP000092553    UP000000803    UP000001292    UP000007801    UP000008744    UP000008711    UP000037069    UP000268350    UP000095301    UP000242188    UP000091820    UP000092460    UP000036403    UP000095300    UP000007798    UP000076858   

PRIDE

H9J053    Q95RG8   

Pfam

PF08518   GIT_SHD        + More
PF12205   GIT1_C
PF01412   ArfGap
PF12796   Ank_2
PF00023   Ank
PF16559   GIT_CC

Interpro

IPR002110   Ankyrin_rpt        + More
IPR013724   GIT_SHD       
IPR036770   Ankyrin_rpt-contain_sf       
IPR022018   GIT1_C       
IPR020683   Ankyrin_rpt-contain_dom       
IPR001164   ArfGAP_dom       
IPR038508   ArfGAP_dom_sf       
IPR037278   ARFGAP/RecO       
IPR032352   GIT1/2_CC       

SUPFAM

SSF48403   SSF48403        + More
SSF57863   SSF57863       

Gene 3D

1.25.40.20     3.30.40.160    

CDD

cd00204  ANK

ProteinModelPortal

H9J053   A0A2H1WWU6   A0A194Q9R7   A0A212FCF8   A0A3S2MA72   A0A194QR48   + More
A0A151WXQ6   A0A195CAT5   A0A232EUV4   A0A195EXK2   E2AI12   A0A158NSN3   A0A026WS75   A0A0M8ZTS4   A0A182PIP2   A0A182RJF3   A0A154P3F7   A0A182WBD1   A0A0L7R740   Q7QII5   A0A2A3E4H6   A0A310SL03   A0A2J7PJW5   A0A182WWC8   A0A182VDN2   A0A182I6K7   A0A182QWG5   A0A1Q3G3B6   A0A1Q3G3E8   A0A182N9G0   Q16UB2   A0A182Y828   A0A182U691   A0A1Q3G3E6   A0A0C9R497   A0A336LJS8   A0A182JS68   A0A067R4N6   A0A182JM45   A0A088A058   A0A1B0CB88   A0A1L8DMG8   A0A182LXY4   A0A2M4BFC6   A0A2M4CTA9   A0A084W684   A0A2M4CS14   A0A2M4AKZ6   A0A182FGR7   A0A2M3ZHS3   A0A1B6D9N2   W8BA04   W5J511   A0A1W4X0D2   A0A0K8UBF3   A0A034VR95   A0A1W4VR65   B4KN17   B4LKN1   B4QAL6   B4P852   A0A0K8UWI6   Q28XI9   B4J7S4   A0A0M4ETN0   Q95RG8   A0A0J9R9X7   B4HMS7   B3MIJ1   B4GG79   B3NN67   A0A2M4AM27   A0A0L0BPH7   A0A3B0J0H5   T1PHX1   A0A1I8N1N3   A0A210R2V6   A0A0A9YWP0   A0A1A9X3Q2   A0A1B0C0P3   A0A0J7KJ44   A0A1I8Q748   A0A0P6EZA7   V5GWK4   B4MIR6   A0A0P5PSR0   A0A0P5I9M5   A0A0N8E6G4   A0A0P5MVR6   A0A0N8E5J6  

PDB

1DCQ     E-value=6.71223e-15,     Score=199

KEGG

101738239    K12487 G protein-coupled receptor kinase interactor 2 | (RefSeq) ARF GTPase-activating protein GIT2

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0005096   GO:0060090   GO:1905383   GO:0007525   GO:0016319   GO:0048788   GO:0046620   GO:0035332   GO:0031252   GO:0036465   GO:0048786   GO:0016301   GO:0099504   GO:0005737   GO:0043087   GO:0005515   GO:0006412   GO:0005622   GO:0008270   GO:0006508   GO:0007264   GO:0008026   GO:0016597  

Length:

708

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00642

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00035

outside

1  -  708

 

 

Pi

27.397403

Theta

25.258842

Tajima's D

0.252786

CLR

1.781969

CSRT

0.447277636118194

Interpretation

Uncertain