Gene

KWMTBOMO05985

Pre Gene Modal

BGIBMGA002813

Annotation

PREDICTED:_dynein_light_chain_4?_axonemal_[Plutella_xylostella]

Location

Bomo_Chr10(+):15770918-15776271      View in EpiBrowser

Full name

Dynein light chain      

Location in the cell

Cytoplasmic   Reliability : 1.998

CDS

ATGGCCGAAGAAGGTGCCGCAACGCAGGGAGGCGCCGAAAAGGTGGTCCACACGTATCCGTTAATAAGACATTCAGATATGTCTGAAGAGATGCGGACGGAGGCAGTGGAACTCTCCGTGACGGCTTGCGAGAAATTCGCACAGAACAATGAGTTGGCCGCGAGAATGGTCAAAGAGTCCATGGACAAGAAGTTCGGTCCTGCCTTCCATGTTGTCGTCGGCGAGAGTTACGGCTTCGAAATCACGTACGAGTGCACAACCATATGTTACATGTATTTTGGCGGGAACCAAGCGATTTGCATATGGAAGTGCTCGTAA

Protein

MAEEGAATQGGAEKVVHTYPLIRHSDMSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECTTICYMYFGGNQAICIWKCS

Similarity

Belongs to the dynein light chain family.

Uniprot

A0A3S2P1V4   A0A194Q574   A0A194QR70   A0A212FCF7   A0A2H1WWU3   A0A2A4J344   + More
A0A0L7KZB3   H9IZX8   A0A2P8YK94   A0A2J7R7G4   A0A067R7E5   A0A2T7PYY3   A0A3M7S817   A0A1B6HQG8   A0A267F3Z6   D6X2I7   U4UGA9   A0A1B6GCN3   R7VED4   A0A1B6M1B6   A0A210QKU2   A0A1S3HCP3   K1QHD3   A0A2R7X0R5   V3YVH6   C3Z7R7   A0A1B6DJU3   A0A2C9K2A6   A0A2D0Q9S9   A0A1B0DFW7   A0A1B0CB89   W8CDP4   A0A034WVE0   A0A0A1XHK2   A0A1I8NEF9   A0A0B7BXJ1   A0A3N0Y3F6   A0A3M6U7Q0   Q4RGE0   A0A3B5KEU7   A7SCP2   A0A3B3RIW8   A0A0L7K2M7   A0A0L0BPM7   F6Q578   W4XLU7   A0A3B4DC97   A0A091SG35   A0A2D4HFD2   A0A098LZ10   J3RZ48   A0A093B8V3   A0A2D0QGY8   A0A1W4W362   A0A0M4E5Z2   C1BX02   A0A3Q1HC27   Q68FC5   Q6DIF1   A0A1S3L4F9   Q503Z7   A0A3Q2P9N0   A0A3B4DXC6   A7MCB9   A0A091SJM6   A0A3Q3RS01   A0A3B4XUF6   A0A3Q2DVF2   A0A3B3WFJ4   A0A3Q1GDC2   A0A3Q2XE21   A0A3B5QHX7   A0A087XH34   A0A3Q1AZQ3   A0A3B4UIE7   A0A3Q3FNT2   A0A3Q3K117   A0A3B3TPN1   A0A3P9MSB5   A0A3P8SLJ9   A0A3Q4B952   A0A3P8WYI0   A0A2D0QJJ4   A0A3B1K8K2   A0A093GI43   A0A1W5AP44   A0A151NHL8   K7F9D8   M7AQW5   A0A3Q0H9G7   A0A093QTP4   A0A2D0QGY1   A0A1V4JA46   A0A2I0MJA8   A0A1I8QAB5   B4J4N3   A0A3B5B7S5   A0A060Y4S6   C0HAY8   A0A147AZU6  

Pubmed

26354079    22118469    26227816    19121390    29403074    24845553    + More
30375419    18362917    19820115    23537049    23254933    28812685    22992520    18563158    15562597    24495485    25348373    25830018    25315136    30382153    15496914    21551351    17615350    29240929    26108605    25243066    23025625    20433749    25069045    27762356    20431018    23594743    23542700    24487278    25329095    22293439    17381049    23624526    23371554    17994087    24755649   

EMBL

RSAL01000002    RVE54967.1    KQ459472    KPJ00155.1    KQ461175    KPJ07982.1    + More
AGBW02009199    OWR51398.1    ODYU01011649    SOQ57530.1    NWSH01003683    PCG65934.1    JTDY01004263    KOB68364.1    BABH01018967    PYGN01000534    PSN44669.1    NEVH01006732    PNF36777.1    KK852824    KDR15430.1    PZQS01000001    PVD38618.1    REGN01001894    RNA31787.1    GECU01030851    JAS76855.1    NIVC01001593    NIVC01001392    NIVC01000524    PAA66057.1    PAA68481.1    PAA81558.1    KQ971372    EFA09448.1    KB632309    ERL92067.1    GECZ01009577    JAS60192.1    AMQN01004164    KB292771    ELU16999.1    GEBQ01010265    JAT29712.1    NEDP02003190    OWF49241.1    JH815947    EKC30534.1    KK856272    PTY25352.1    KB204066    ESO81978.1    GG666591    EEN51422.1    GEDC01011332    JAS25966.1    AJVK01059061    AJWK01004894    GAMC01001591    JAC04965.1    GAKP01000348    JAC58604.1    GBXI01003468    JAD10824.1    HACG01050226    CEK97091.1    RJVU01053127    ROL40723.1    RCHS01002083    RMX49589.1    CAAE01015100    CAG12542.1    DS469624    EDO38557.1    JTDY01014084    KOB52056.1    JRES01001567    KNC21918.1    GAMT01005950    GAMS01009474    GAMR01010726    GAMQ01007353    GAMP01001760    JAB05911.1    JAB13662.1    JAB23206.1    JAB34498.1    JAB50995.1    AAGJ04118807    KK949747    KFQ57358.1    IACK01025385    LAA70694.1    GBSI01000774    JAC95722.1    JU174413    GBEX01001049    AFJ49939.1    JAI13511.1    KN125643    KFU83603.1    CP012524    ALC41804.1    BT079131    ACO13555.1    BC079917    CM004473    AAH79917.1    OCT83119.1    AAMC01026198    BC075591    CR762240    AAH75591.1    CAJ83547.1    AL929032    BC095114    AAH95114.1    BC152120    CR932977    AAI52121.1    CAQ13826.1    KK821961    KFQ40465.1    AYCK01017442    KL216282    KFV68873.1    AKHW03002956    KYO36316.1    AGCU01057954    AGCU01057955    KB574221    EMP27014.1    KL672898    KFW87322.1    LSYS01008398    OPJ68930.1    AKCR02000009    PKK29764.1    CH916367    EDW02738.1    FR906430    FR920690    CDQ84394.1    CDQ95321.1    BT059494    ACN11207.1    GCES01002210    JAR84113.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000007151    UP000218220    UP000037510    + More
UP000005204    UP000245037    UP000235965    UP000027135    UP000245119    UP000276133    UP000215902    UP000007266    UP000030742    UP000014760    UP000242188    UP000085678    UP000005408    UP000030746    UP000001554    UP000076420    UP000221080    UP000092462    UP000092461    UP000095301    UP000275408    UP000007303    UP000005226    UP000001593    UP000261540    UP000037069    UP000007110    UP000261440    UP000192223    UP000092553    UP000265140    UP000265040    UP000186698    UP000008143    UP000087266    UP000000437    UP000265000    UP000261640    UP000261360    UP000265020    UP000261480    UP000257200    UP000264820    UP000002852    UP000028760    UP000257160    UP000261420    UP000264800    UP000261600    UP000261500    UP000242638    UP000265080    UP000261620    UP000265120    UP000018467    UP000053875    UP000192224    UP000050525    UP000007267    UP000031443    UP000189705    UP000053258    UP000190648    UP000053872    UP000095300    UP000001070    UP000261400    UP000193380   

PRIDE

H9IZX8   

Pfam

PF01221   Dynein_light

Interpro

IPR037177   DLC_sf        + More
IPR001372   Dynein_light_chain_typ-1/2       

SUPFAM

SSF54648   SSF54648       

Gene 3D

3.30.740.10    

ProteinModelPortal

A0A3S2P1V4   A0A194Q574   A0A194QR70   A0A212FCF7   A0A2H1WWU3   A0A2A4J344   + More
A0A0L7KZB3   H9IZX8   A0A2P8YK94   A0A2J7R7G4   A0A067R7E5   A0A2T7PYY3   A0A3M7S817   A0A1B6HQG8   A0A267F3Z6   D6X2I7   U4UGA9   A0A1B6GCN3   R7VED4   A0A1B6M1B6   A0A210QKU2   A0A1S3HCP3   K1QHD3   A0A2R7X0R5   V3YVH6   C3Z7R7   A0A1B6DJU3   A0A2C9K2A6   A0A2D0Q9S9   A0A1B0DFW7   A0A1B0CB89   W8CDP4   A0A034WVE0   A0A0A1XHK2   A0A1I8NEF9   A0A0B7BXJ1   A0A3N0Y3F6   A0A3M6U7Q0   Q4RGE0   A0A3B5KEU7   A7SCP2   A0A3B3RIW8   A0A0L7K2M7   A0A0L0BPM7   F6Q578   W4XLU7   A0A3B4DC97   A0A091SG35   A0A2D4HFD2   A0A098LZ10   J3RZ48   A0A093B8V3   A0A2D0QGY8   A0A1W4W362   A0A0M4E5Z2   C1BX02   A0A3Q1HC27   Q68FC5   Q6DIF1   A0A1S3L4F9   Q503Z7   A0A3Q2P9N0   A0A3B4DXC6   A7MCB9   A0A091SJM6   A0A3Q3RS01   A0A3B4XUF6   A0A3Q2DVF2   A0A3B3WFJ4   A0A3Q1GDC2   A0A3Q2XE21   A0A3B5QHX7   A0A087XH34   A0A3Q1AZQ3   A0A3B4UIE7   A0A3Q3FNT2   A0A3Q3K117   A0A3B3TPN1   A0A3P9MSB5   A0A3P8SLJ9   A0A3Q4B952   A0A3P8WYI0   A0A2D0QJJ4   A0A3B1K8K2   A0A093GI43   A0A1W5AP44   A0A151NHL8   K7F9D8   M7AQW5   A0A3Q0H9G7   A0A093QTP4   A0A2D0QGY1   A0A1V4JA46   A0A2I0MJA8   A0A1I8QAB5   B4J4N3   A0A3B5B7S5   A0A060Y4S6   C0HAY8   A0A147AZU6  

PDB

4QH8     E-value=4.00437e-10,     Score=148

KEGG

101738776    K10412 dynein light chain 4, axonemal | (RefSeq) dynein light chain 4, axonemal

GO

GO:0030286   GO:0005737   GO:0003774   GO:0005874   GO:0007017   GO:0051959   GO:2000582   GO:0045505   GO:0006412   GO:0005622   GO:0008270   GO:0006508   GO:0007264   GO:0008026   GO:0016597  

PANTHER

PTHR11886  

Subcellular location

  

Length:

105

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.41645

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.22049

outside

1  -  105

 

 

Pi

18.581794

Theta

21.460759

Tajima's D

-0.670942

CLR

0.422067

CSRT

0.212189390530473

Interpretation

Uncertain