Gene

KWMTBOMO05982

Pre Gene Modal

BGIBMGA002812

Annotation

PREDICTED:_josephin-2_[Amyelois_transitella]

Location

Bomo_Chr10(+):15733838-15737020      View in EpiBrowser

Full name

Autophagy protein 5      

Location in the cell

Nuclear   Reliability : 2.23

CDS

ATGAGTGCGAAACCGACTATTTATCATGAAAAACAAATAAAAGAATTGTGCGCCTTACACGCGCTCAATAATTTATTCCAGACTCGAGGAACATTTTCTAAATCGGAACTAGATGCAATATGCAGTCGCCTGTCTCCAAATGTTTGGATAAATCCTCACAGATCACTTCTTGGCCTTGGAAACTATGATATAAATGTGATAATGGCAGCGTTACAGAAGAAGGGCTGTGAAGCCATCTGGTTTGATAAAAGAAAAGATCCCGGTTGCCTAGATCTTGCCAATATTTGTGGATTCATATTAAATGTGCCTTCGGATTACAAGCTTGGTTTTGTTATGCTGCCATTACGTCGTCGGCATTGGATCACAATTAGACAGATACAGGGAAACTTTTATAATCTTGATTCGAAGTTGGACTCACCTCAGTTAATAGGAAGGAGTTGTGACCTTATCGCGTATCTAAAGGAACAACTAGACAGCAAAGAGAAAGAACTATTTATTGTGGTGAGTAAAGAAGTCGAAGAGAAACAGCTTTGGATGCACCAGTATGTTTTGCCAACACCGGAGCCAAACTATTGCCCTAAACTACCTCTGAACGGTGAAAGTCCAAGCGAAAGCATATCGTCCAACGGCCAATATGATTATAATAATAGAGACGCCGAGTGTCTCAAACTAAATGATGTCCAAAATCATATCCTCAGCACAGAGAATAACTGCTAA

Protein

MSAKPTIYHEKQIKELCALHALNNLFQTRGTFSKSELDAICSRLSPNVWINPHRSLLGLGNYDINVIMAALQKKGCEAIWFDKRKDPGCLDLANICGFILNVPSDYKLGFVMLPLRRRHWITIRQIQGNFYNLDSKLDSPQLIGRSCDLIAYLKEQLDSKEKELFIVVSKEVEEKQLWMHQYVLPTPEPNYCPKLPLNGESPSESISSNGQYDYNNRDAECLKLNDVQNHILSTENNC

Description

Involved in autophagic vesicle formation.

Subunit

Conjugated with ATG12.

Similarity

Belongs to the ATG5 family.

Uniprot

H9IZX7   A0A3S2P8I0   A0A2H1VR71   A0A2A4J3A8   A0A194QRM0   A0A212FCE5   + More
A0A194Q3P2   A0A2J7QBI4   A0A224XXG2   A0A069DQ61   A0A023FCU3   A0A0A9W5R0   A0A1Y1N786   R4WNS4   A0A0P4VHG7   T1I1M6   A0A0L7RHM5   A0A170ZT76   E2CA58   A0A151X737   E1ZWU6   A0A026W2D5   A0A067R0N6   F4WWP6   A0A195BK08   A0A195FIC0   A0A158NJ18   A0A195D4W5   A0A1B6IWA0   A0A154P2T5   K7ITM7   A0A0N0BHA5   A0A232EUT6   A0A087ZQ33   A0A2A3E046   V9IKG7   A0A151JMU1   A0A1B6FMZ9   A0A1B6LRM8   A0A0C9RUK9   A0A1B6DIB6   D6X2A7   E9IWK8   A0A0K8TN32   A0A310SQZ0   A0A0T6B351   A0A2M4C102   W5JVH7   T1J928   A0A2M4C0Y4   A0A182WK13   A0A182YC27   A0A182RKW8   A0A182QMS9   A0A2M3ZCG1   A0A2M3ZJH0   A0A182SWI8   A0A1I8NGZ4   A0A182P8U0   A0A182K5M8   A0A023EIQ0   A0A182LBP7   A0A182VKI2   A0A182HNW8   A0A182TQ01   Q7Q9I0   A0A1W4WWH9   A0A182NQ70   A0A1S3K5G6   B4KLR8   W8BCZ7   B4LPH5   A0A0P4WEN3   A0A1Q3F2Q6   B0WMV4   A0A182XEU1   A0A0K8UUB7   A0A0L0C2Z0   A0A2T7PVK7   A0A182MBI7   J3JW92   B7P7H9   A0A1A9V235   A0A1A9X4R1   A0A023G2N4   A0A147BHG7   A0A131XSP0   A0A2P2I8D3   E0VTF4   A0A1B0A3P3   A0A0M4EB42   A0A2R5LKR3   A0A1B0GC96  

Pubmed

19121390    26354079    22118469    26334808    25474469    25401762    + More
26823975    28004739    23691247    27129103    20798317    24508170    30249741    24845553    21719571    21347285    20075255    28648823    18362917    19820115    21282665    26369729    20920257    23761445    25244985    25315136    24945155    20966253    12364791    14747013    17210077    17994087    18057021    24495485    26108605    22516182    23537049    29652888    20566863   

EMBL

BABH01018973    RSAL01000002    RVE54970.1    ODYU01003953    SOQ43343.1    NWSH01003683    + More
PCG65930.1    KQ461175    KPJ07979.1    AGBW02009199    OWR51401.1    KQ459472    KPJ00152.1    NEVH01016298    PNF25944.1    GFTR01003204    JAW13222.1    GBGD01003078    JAC85811.1    GBBI01000228    JAC18484.1    GBHO01041766    GDHC01009316    JAG01838.1    JAQ09313.1    GEZM01013070    JAV92780.1    AK417316    BAN20531.1    GDKW01003486    JAI53109.1    ACPB03008059    KQ414592    KOC70236.1    GEMB01001896    JAS01277.1    GL453920    EFN75213.1    KQ982454    KYQ56187.1    GL434905    EFN74343.1    KK107474    QOIP01000002    EZA50158.1    RLU25610.1    KK853027    KDR12294.1    GL888412    EGI61368.1    KQ976453    KYM85508.1    KQ981523    KYN40126.1    ADTU01017351    KQ976885    KYN07469.1    GECU01032844    GECU01016586    JAS74862.1    JAS91120.1    KQ434809    KZC06245.1    KQ435756    KOX75938.1    NNAY01002087    OXU22122.1    KZ288507    PBC25140.1    JR052009    AEY61608.1    KQ978889    KYN27654.1    GECZ01018197    JAS51572.1    GEBQ01031796    GEBQ01024207    GEBQ01013614    GEBQ01010031    JAT08181.1    JAT15770.1    JAT26363.1    JAT29946.1    GBYB01011276    JAG81043.1    GEDC01011896    JAS25402.1    KQ971371    EFA10237.1    GL766581    EFZ15045.1    GDAI01001826    JAI15777.1    KQ761155    OAD58185.1    LJIG01016122    KRT81550.1    GGFJ01009813    MBW58954.1    ADMH02000363    ETN66819.1    JH431968    GGFJ01009814    MBW58955.1    AXCN02001019    GGFM01005441    MBW26192.1    GGFM01007912    MBW28663.1    GAPW01004773    JAC08825.1    APCN01002800    AAAB01008900    EAA09343.3    CH933808    EDW09728.1    KRG04870.1    GAMC01007400    GAMC01007398    JAB99155.1    CH940648    EDW61234.1    GDRN01039947    GDRN01039946    JAI67174.1    GFDL01013200    JAV21845.1    DS232003    EDS31346.1    GDHF01022030    JAI30284.1    JRES01000960    KNC26718.1    PZQS01000001    PVD37465.1    AXCM01012095    APGK01056095    APGK01056096    BT127510    KB741274    KB632130    AEE62472.1    ENN71334.1    ERL88975.1    ABJB010728121    DS652265    EEC02551.1    GBBM01006982    JAC28436.1    GEGO01005230    JAR90174.1    GEFM01005757    JAP70039.1    IACF01004587    LAB70176.1    DS235763    EEB16660.1    CP012524    ALC40677.1    GGLE01005984    MBY10110.1    CCAG010007832   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000235965    UP000015103    UP000053825    UP000008237    UP000075809    UP000000311    UP000053097    UP000279307    UP000027135    UP000007755    UP000078540    UP000078541    UP000005205    UP000078542    UP000076502    UP000002358    UP000053105    UP000215335    UP000005203    UP000242457    UP000078492    UP000007266    UP000000673    UP000075920    UP000076408    UP000075900    UP000075886    UP000075901    UP000095301    UP000075885    UP000075881    UP000075882    UP000075903    UP000075840    UP000075902    UP000007062    UP000192223    UP000075884    UP000085678    UP000009192    UP000008792    UP000002320    UP000076407    UP000037069    UP000245119    UP000075883    UP000019118    UP000030742    UP000001555    UP000078200    UP000091820    UP000009046    UP000092445    UP000092553    UP000092444   

PRIDE

H9IZX7   

Pfam

PF02099   Josephin        + More
PF04106   APG5

Interpro

IPR040053   JOSD1/2        + More
IPR006155   Josephin       
IPR007239   Atg5       

ProteinModelPortal

H9IZX7   A0A3S2P8I0   A0A2H1VR71   A0A2A4J3A8   A0A194QRM0   A0A212FCE5   + More
A0A194Q3P2   A0A2J7QBI4   A0A224XXG2   A0A069DQ61   A0A023FCU3   A0A0A9W5R0   A0A1Y1N786   R4WNS4   A0A0P4VHG7   T1I1M6   A0A0L7RHM5   A0A170ZT76   E2CA58   A0A151X737   E1ZWU6   A0A026W2D5   A0A067R0N6   F4WWP6   A0A195BK08   A0A195FIC0   A0A158NJ18   A0A195D4W5   A0A1B6IWA0   A0A154P2T5   K7ITM7   A0A0N0BHA5   A0A232EUT6   A0A087ZQ33   A0A2A3E046   V9IKG7   A0A151JMU1   A0A1B6FMZ9   A0A1B6LRM8   A0A0C9RUK9   A0A1B6DIB6   D6X2A7   E9IWK8   A0A0K8TN32   A0A310SQZ0   A0A0T6B351   A0A2M4C102   W5JVH7   T1J928   A0A2M4C0Y4   A0A182WK13   A0A182YC27   A0A182RKW8   A0A182QMS9   A0A2M3ZCG1   A0A2M3ZJH0   A0A182SWI8   A0A1I8NGZ4   A0A182P8U0   A0A182K5M8   A0A023EIQ0   A0A182LBP7   A0A182VKI2   A0A182HNW8   A0A182TQ01   Q7Q9I0   A0A1W4WWH9   A0A182NQ70   A0A1S3K5G6   B4KLR8   W8BCZ7   B4LPH5   A0A0P4WEN3   A0A1Q3F2Q6   B0WMV4   A0A182XEU1   A0A0K8UUB7   A0A0L0C2Z0   A0A2T7PVK7   A0A182MBI7   J3JW92   B7P7H9   A0A1A9V235   A0A1A9X4R1   A0A023G2N4   A0A147BHG7   A0A131XSP0   A0A2P2I8D3   E0VTF4   A0A1B0A3P3   A0A0M4EB42   A0A2R5LKR3   A0A1B0GC96  

PDB

3O65     E-value=9.65268e-09,     Score=141

KEGG

101739342    K15235 josephin [EC:3.4.19.12] | (RefSeq) josephin-2

GO

GO:0004843   GO:0016579   GO:0016787   GO:0006914   GO:0034045   GO:0006412   GO:0005622   GO:0008270   GO:0006508   GO:0007264   GO:0008026   GO:0016597  

PANTHER

PTHR13291   PTHR13040  

Subcellular location

Preautophagosomal structure membrane  

Length:

238

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09695

Exp number, first 60 AAs:

0.00161

Total prob of N-in:

0.08165

outside

1  -  238

 

 

Pi

15.509995

Theta

16.681501

Tajima's D

0.176762

CLR

2.118691

CSRT

0.433228338583071

Interpretation

Uncertain